RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 TPTEP56180 551 aa8.24□□□□□ -1.09
SCFD1-220ENST00000556486 PCK2Q16822 640 aa8.24□□□□□ -1.09
SCFD1-220ENST00000556486 KPRPQ5T749 579 aaPredicted RBP8.24□□□□□ -1.09
SCFD1-220ENST00000556486 GLYATQ6IB77 296 aa8.24□□□□□ -1.09
SCFD1-220ENST00000556486 C16orf54Q6UWD8 224 aa8.24□□□□□ -1.09
SCFD1-220ENST00000556486 LDLRAD3Q86YD5 345 aa8.24□□□□□ -1.09
SCFD1-220ENST00000556486 LINC00346Q8IVM7 164 aa8.24□□□□□ -1.09
SCFD1-220ENST00000556486 FAM86B1Q8N7N1 296 aa8.24□□□□□ -1.09
SCFD1-220ENST00000556486 PNLDC1Q8NA58 520 aaKnown RBP8.24□□□□□ -1.09
SCFD1-220ENST00000556486 SPERTQ8NA61 448 aa8.24□□□□□ -1.09
SCFD1-220ENST00000556486 OR2AJ1Q8NGZ0 328 aa8.24□□□□□ -1.09
SCFD1-220ENST00000556486 SGCDQ92629 289 aa8.24□□□□□ -1.09
SCFD1-220ENST00000556486 DYRK2Q92630 601 aa8.24□□□□□ -1.09
SCFD1-220ENST00000556486 SPTSSAQ969W0 71 aa8.24□□□□□ -1.09
SCFD1-220ENST00000556486 SLCO4A1Q96BD0 722 aa8.24□□□□□ -1.09
SCFD1-220ENST00000556486 ZNF799Q96GE5 643 aa8.24□□□□□ -1.09
SCFD1-220ENST00000556486 WDFY2Q96P53 400 aa8.24□□□□□ -1.09
SCFD1-220ENST00000556486 TBX15Q96SF7 602 aa8.24□□□□□ -1.09
SCFD1-220ENST00000556486 SEMA6AQ9H2E6 1030 aa8.24□□□□□ -1.09
SCFD1-220ENST00000556486 OPA3Q9H6K4 179 aa8.24□□□□□ -1.09
SCFD1-220ENST00000556486 FN3KRPQ9HA64 309 aa8.24□□□□□ -1.09
SCFD1-220ENST00000556486 RPRD1BQ9NQG5 326 aaKnown RBP8.24□□□□□ -1.09
SCFD1-220ENST00000556486 AURKAIP1Q9NWT8 199 aaPredicted RBP8.24□□□□□ -1.09
SCFD1-220ENST00000556486 ERVK-18Q9QC07 812 aa8.24□□□□□ -1.09
SCFD1-220ENST00000556486 KAAG1Q9UBP8 84 aa8.24□□□□□ -1.09
SCFD1-220ENST00000556486 CD300AQ9UGN4 299 aa8.24□□□□□ -1.09
SCFD1-220ENST00000556486 TMCC3Q9ULS5 477 aa8.24□□□□□ -1.09
SCFD1-220ENST00000556486 TRAV38-1A0A0B4J264 116 aa8.23□□□□□ -1.09
SCFD1-220ENST00000556486 OOEPA6NGQ2 149 aa8.23□□□□□ -1.09
SCFD1-220ENST00000556486 HMX3A6NHT5 357 aa8.23□□□□□ -1.09
SCFD1-220ENST00000556486 GADD45GO95257 159 aa8.23□□□□□ -1.09
SCFD1-220ENST00000556486 ECDO95905 644 aaPredicted RBP8.23□□□□□ -1.09
SCFD1-220ENST00000556486 LHBP01229 141 aa8.23□□□□□ -1.09
SCFD1-220ENST00000556486 LCATP04180 440 aa8.23□□□□□ -1.09
SCFD1-220ENST00000556486 CA6P23280 308 aa8.23□□□□□ -1.09
SCFD1-220ENST00000556486 IFNGR2P38484 337 aa8.23□□□□□ -1.09
SCFD1-220ENST00000556486 PSME3P61289 254 aa8.23□□□□□ -1.09
SCFD1-220ENST00000556486 ZNF92Q03936 586 aa8.23□□□□□ -1.09
SCFD1-220ENST00000556486 PRB3Q04118 309 aaPredicted RBP8.23□□□□□ -1.09
SCFD1-220ENST00000556486 TSPAN31Q12999 210 aa8.23□□□□□ -1.09
SCFD1-220ENST00000556486 OR8G1Q15617 311 aa8.23□□□□□ -1.09
SCFD1-220ENST00000556486 TEX36Q5VZQ5 186 aa8.23□□□□□ -1.09
SCFD1-220ENST00000556486 DRAM2Q6UX65 266 aa8.23□□□□□ -1.09
SCFD1-220ENST00000556486 MRPL21Q7Z2W9 205 aaKnown RBP8.23□□□□□ -1.09
SCFD1-220ENST00000556486 NAA40Q86UY6 237 aa8.23□□□□□ -1.09
SCFD1-220ENST00000556486 LINC00482Q8N8I6 264 aa8.23□□□□□ -1.09
SCFD1-220ENST00000556486 OR4K13Q8NH42 304 aa8.23□□□□□ -1.09
SCFD1-220ENST00000556486 SPRYD4Q8WW59 207 aaPredicted RBP8.23□□□□□ -1.09
SCFD1-220ENST00000556486 SLC7A6OSQ96CW6 309 aaPredicted RBP8.23□□□□□ -1.09
SCFD1-220ENST00000556486 CMTM5Q96DZ9 223 aa8.23□□□□□ -1.09
SCFD1-220ENST00000556486 PYURFQ96I23 114 aa8.23□□□□□ -1.09
SCFD1-220ENST00000556486 ADAT1Q9BUB4 502 aaKnown RBP8.23□□□□□ -1.09
SCFD1-220ENST00000556486 SIRPDQ9H106 197 aa8.23□□□□□ -1.09
SCFD1-220ENST00000556486 ACOXLQ9NUZ1 547 aa8.23□□□□□ -1.09
SCFD1-220ENST00000556486 SIGLEC9Q9Y336 463 aa8.23□□□□□ -1.09
SCFD1-220ENST00000556486 IGHV1-69DA0A0B4J2H0 117 aa8.22□□□□□ -1.09
SCFD1-220ENST00000556486 ZNF816-ZNF321PA0A0X1KG74 233 aa8.22□□□□□ -1.09
SCFD1-220ENST00000556486 C5orf63A6NC05 138 aa8.22□□□□□ -1.09
SCFD1-220ENST00000556486 ZNF785A8K8V0 405 aa8.22□□□□□ -1.09
SCFD1-220ENST00000556486 RAB27BO00194 218 aa8.22□□□□□ -1.09
SCFD1-220ENST00000556486 FCN3O75636 299 aa8.22□□□□□ -1.09
SCFD1-220ENST00000556486 INMTO95050 263 aa8.22□□□□□ -1.09
SCFD1-220ENST00000556486 DIRAS1O95057 198 aa8.22□□□□□ -1.09
SCFD1-220ENST00000556486 IGHV1-69P01742 117 aa8.22□□□□□ -1.09
SCFD1-220ENST00000556486 OPN1MWP04001 364 aa8.22□□□□□ -1.09
SCFD1-220ENST00000556486 OPN1MW2P0DN77 364 aa8.22□□□□□ -1.09
SCFD1-220ENST00000556486 OPN1MW3P0DN78 364 aa8.22□□□□□ -1.09
SCFD1-220ENST00000556486 VSIG10L2P0DP72 767 aa8.22□□□□□ -1.09
SCFD1-220ENST00000556486 HSD17B1P14061 328 aa8.22□□□□□ -1.09
SCFD1-220ENST00000556486 PRDX6P30041 224 aa8.22□□□□□ -1.09
SCFD1-220ENST00000556486 DDOSTP39656 456 aa8.22□□□□□ -1.09
SCFD1-220ENST00000556486 CENPAP49450 140 aa8.22□□□□□ -1.09
SCFD1-220ENST00000556486 HMGA2P52926 109 aa8.22□□□□□ -1.09
SCFD1-220ENST00000556486 SRSF3P84103 164 aaKnown RBP8.22□□□□□ -1.09
SCFD1-220ENST00000556486 MZT1Q08AG7 82 aa8.22□□□□□ -1.09
SCFD1-220ENST00000556486 SF3A3Q12874 501 aaKnown RBP eCLIP8.22□□□□□ -1.09
SCFD1-220ENST00000556486 SNAI3Q3KNW1 292 aa8.22□□□□□ -1.09
SCFD1-220ENST00000556486 TEX30Q5JUR7 227 aa8.22□□□□□ -1.09
SCFD1-220ENST00000556486 METTL11BQ5VVY1 283 aa8.22□□□□□ -1.09
SCFD1-220ENST00000556486 PRAMEF6Q5VXH4 476 aa8.22□□□□□ -1.09
SCFD1-220ENST00000556486 DHRS7BQ6IAN0 325 aaPredicted RBP8.22□□□□□ -1.09
SCFD1-220ENST00000556486 RPL13AP3Q6NVV1 102 aa8.22□□□□□ -1.09
SCFD1-220ENST00000556486 METAP1DQ6UB28 335 aaPredicted RBP8.22□□□□□ -1.09
SCFD1-220ENST00000556486 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.22□□□□□ -1.09
SCFD1-220ENST00000556486 GCSAMQ8N6F7 178 aa8.22□□□□□ -1.09
SCFD1-220ENST00000556486 SCCPDHQ8NBX0 429 aa8.22□□□□□ -1.09
SCFD1-220ENST00000556486 OR4C15Q8NGM1 316 aa8.22□□□□□ -1.09
SCFD1-220ENST00000556486 OR52J3Q8NH60 311 aa8.22□□□□□ -1.09
SCFD1-220ENST00000556486 TBC1D15Q8TC07 691 aa8.22□□□□□ -1.09
SCFD1-220ENST00000556486 LHX4Q969G2 390 aa8.22□□□□□ -1.09
SCFD1-220ENST00000556486 TECTBQ96PL2 329 aa8.22□□□□□ -1.09
SCFD1-220ENST00000556486 IFT27Q9BW83 186 aa8.22□□□□□ -1.09
SCFD1-220ENST00000556486 KRTAP4-8Q9BYQ9 185 aa8.22□□□□□ -1.09
SCFD1-220ENST00000556486 TRIM15Q9C019 465 aa8.22□□□□□ -1.09
SCFD1-220ENST00000556486 IL1RAPQ9NPH3 570 aa8.22□□□□□ -1.09
SCFD1-220ENST00000556486 UFSP2Q9NUQ7 469 aa8.22□□□□□ -1.09
SCFD1-220ENST00000556486 IL20Q9NYY1 176 aa8.22□□□□□ -1.09
SCFD1-220ENST00000556486 SLC45A2Q9UMX9 530 aa8.22□□□□□ -1.09
SCFD1-220ENST00000556486 FOXJ3Q9UPW0 622 aa8.22□□□□□ -1.09
SCFD1-220ENST00000556486 KPTNQ9Y664 436 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms