RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 H2AFB2P0C5Z0 115 aa8.11□□□□□ -1.11
SRP54-210ENST00000556380 LIMS3P0CW19 117 aa8.11□□□□□ -1.11
SRP54-210ENST00000556380 LIMS4P0CW20 117 aa8.11□□□□□ -1.11
SRP54-210ENST00000556380 PSMB10P40306 273 aa8.11□□□□□ -1.11
SRP54-210ENST00000556380 KIR3DL2P43630 455 aa8.11□□□□□ -1.11
SRP54-210ENST00000556380 GZMKP49863 264 aa8.11□□□□□ -1.11
SRP54-210ENST00000556380 NANOS3P60323 173 aaKnown RBP8.11□□□□□ -1.11
SRP54-210ENST00000556380 MVKQ03426 396 aa8.11□□□□□ -1.11
SRP54-210ENST00000556380 ZMYND11Q15326 602 aa8.11□□□□□ -1.11
SRP54-210ENST00000556380 SNCBQ16143 134 aa8.11□□□□□ -1.11
SRP54-210ENST00000556380 KLHL22Q53GT1 634 aa8.11□□□□□ -1.11
SRP54-210ENST00000556380 FAM76BQ5HYJ3 339 aa8.11□□□□□ -1.11
SRP54-210ENST00000556380 AVPI1Q5T686 147 aa8.11□□□□□ -1.11
SRP54-210ENST00000556380 BCL2L15Q5TBC7 163 aa8.11□□□□□ -1.11
SRP54-210ENST00000556380 ZBTB37Q5TC79 503 aa8.11□□□□□ -1.11
SRP54-210ENST00000556380 PRAMEF6Q5VXH4 476 aa8.11□□□□□ -1.11
SRP54-210ENST00000556380 TMEM42Q69YG0 159 aa8.11□□□□□ -1.11
SRP54-210ENST00000556380 CYB5R2Q6BCY4 276 aa8.11□□□□□ -1.11
SRP54-210ENST00000556380 LHFPL3Q86UP9 236 aa8.11□□□□□ -1.11
SRP54-210ENST00000556380 SETD9Q8NE22 299 aa8.11□□□□□ -1.11
SRP54-210ENST00000556380 OR14K1Q8NGZ2 314 aa8.11□□□□□ -1.11
SRP54-210ENST00000556380 OR2G2Q8NGZ5 317 aa8.11□□□□□ -1.11
SRP54-210ENST00000556380 ZNF420Q8TAQ5 688 aaPredicted RBP8.11□□□□□ -1.11
SRP54-210ENST00000556380 OR5P3Q8WZ94 311 aa8.11□□□□□ -1.11
SRP54-210ENST00000556380 RAB1CQ92928 201 aa8.11□□□□□ -1.11
SRP54-210ENST00000556380 PELI1Q96FA3 418 aa8.11□□□□□ -1.11
SRP54-210ENST00000556380 TLNRD1Q9H1K6 362 aa8.11□□□□□ -1.11
SRP54-210ENST00000556380 VCX3BQ9H321 246 aa8.11□□□□□ -1.11
SRP54-210ENST00000556380 INPP5EQ9NRR6 644 aa8.11□□□□□ -1.11
SRP54-210ENST00000556380 ERVK13-1Q9NX77 482 aa8.11□□□□□ -1.11
SRP54-210ENST00000556380 GNG8Q9UK08 70 aa8.11□□□□□ -1.11
SRP54-210ENST00000556380 MPC1Q9Y5U8 109 aa8.11□□□□□ -1.11
SRP54-210ENST00000556380 NPTNQ9Y639 398 aa8.11□□□□□ -1.11
SRP54-210ENST00000556380 V9GYS6 101 aa8.11□□□□□ -1.11
SRP54-210ENST00000556380 ZNF816-ZNF321PA0A0X1KG74 233 aa8.1□□□□□ -1.11
SRP54-210ENST00000556380 FAM157AC9JC47 383 aa8.1□□□□□ -1.11
SRP54-210ENST00000556380 H0YHG0 523 aa8.1□□□□□ -1.11
SRP54-210ENST00000556380 P2RY10O00398 339 aa8.1□□□□□ -1.11
SRP54-210ENST00000556380 DHRS3O75911 302 aa8.1□□□□□ -1.11
SRP54-210ENST00000556380 CYB5R3P00387 301 aaPredicted RBP8.1□□□□□ -1.11
SRP54-210ENST00000556380 LHBP01229 141 aa8.1□□□□□ -1.11
SRP54-210ENST00000556380 IGHV2-5P01817 119 aa8.1□□□□□ -1.11
SRP54-210ENST00000556380 THBS2P35442 1172 aa8.1□□□□□ -1.11
SRP54-210ENST00000556380 CCR9P51686 369 aa8.1□□□□□ -1.11
SRP54-210ENST00000556380 AQP4P55087 323 aa8.1□□□□□ -1.11
SRP54-210ENST00000556380 CDH15P55291 814 aa8.1□□□□□ -1.11
SRP54-210ENST00000556380 PRDX4Q13162 271 aa8.1□□□□□ -1.11
SRP54-210ENST00000556380 TMEM155Q4W5P6 130 aa8.1□□□□□ -1.11
SRP54-210ENST00000556380 WDR38Q5JTN6 314 aa8.1□□□□□ -1.11
SRP54-210ENST00000556380 C6orf52Q5T4I8 152 aa8.1□□□□□ -1.11
SRP54-210ENST00000556380 THAP5Q7Z6K1 395 aa8.1□□□□□ -1.11
SRP54-210ENST00000556380 SYS1Q8N2H4 156 aa8.1□□□□□ -1.11
SRP54-210ENST00000556380 SEMA6DQ8NFY4 1073 aa8.1□□□□□ -1.11
SRP54-210ENST00000556380 HPSE2Q8WWQ2 592 aa8.1□□□□□ -1.11
SRP54-210ENST00000556380 TIMD4Q96H15 378 aa8.1□□□□□ -1.11
SRP54-210ENST00000556380 FAM71F1Q96KD3 344 aaPredicted RBP8.1□□□□□ -1.11
SRP54-210ENST00000556380 C4orf36Q96KX1 117 aa8.1□□□□□ -1.11
SRP54-210ENST00000556380 ALG8Q9BVK2 526 aa8.1□□□□□ -1.11
SRP54-210ENST00000556380 PAPOLGQ9BWT3 736 aaKnown RBP8.1□□□□□ -1.11
SRP54-210ENST00000556380 ISG20L2Q9H9L3 353 aaKnown RBP8.1□□□□□ -1.11
SRP54-210ENST00000556380 TMEM165Q9HC07 324 aa8.1□□□□□ -1.11
SRP54-210ENST00000556380 PLCXD1Q9NUJ7 323 aa8.1□□□□□ -1.11
SRP54-210ENST00000556380 TANC2Q9HCD6 1990 aa8.1□□□□□ -1.11
SRP54-210ENST00000556380 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.09□□□□□ -1.11
SRP54-210ENST00000556380 OR4C45A6NMZ5 311 aa8.09□□□□□ -1.11
SRP54-210ENST00000556380 DHRS7CA6NNS2 312 aa8.09□□□□□ -1.11
SRP54-210ENST00000556380 ZNF850A8MQ14 1090 aa8.09□□□□□ -1.11
SRP54-210ENST00000556380 E9PI62 339 aa8.09□□□□□ -1.11
SRP54-210ENST00000556380 J3QLW9 94 aa8.09□□□□□ -1.11
SRP54-210ENST00000556380 TNFRSF13BO14836 293 aaPredicted RBP8.09□□□□□ -1.11
SRP54-210ENST00000556380 ATP6V1G2O95670 118 aa8.09□□□□□ -1.11
SRP54-210ENST00000556380 ISG15P05161 165 aa8.09□□□□□ -1.11
SRP54-210ENST00000556380 ZNF19P17023 458 aa8.09□□□□□ -1.11
SRP54-210ENST00000556380 DCKP27707 260 aa8.09□□□□□ -1.11
SRP54-210ENST00000556380 CFHR2P36980 270 aa8.09□□□□□ -1.11
SRP54-210ENST00000556380 ETV1P50549 477 aa8.09□□□□□ -1.11
SRP54-210ENST00000556380 BTG1P62324 171 aa8.09□□□□□ -1.11
SRP54-210ENST00000556380 ACTA2P62736 377 aa8.09□□□□□ -1.11
SRP54-210ENST00000556380 ACTG2P63267 376 aa8.09□□□□□ -1.11
SRP54-210ENST00000556380 HOXA4Q00056 320 aaPredicted RBP8.09□□□□□ -1.11
SRP54-210ENST00000556380 MZT1Q08AG7 82 aa8.09□□□□□ -1.11
SRP54-210ENST00000556380 RIPPLY1Q0D2K3 151 aa8.09□□□□□ -1.11
SRP54-210ENST00000556380 CEACAM21Q3KPI0 293 aa8.09□□□□□ -1.11
SRP54-210ENST00000556380 FAM201AQ5SY85 155 aa8.09□□□□□ -1.11
SRP54-210ENST00000556380 ZNF826PQ6ZT77 177 aa8.09□□□□□ -1.11
SRP54-210ENST00000556380 DOK3Q7L591 496 aa8.09□□□□□ -1.11
SRP54-210ENST00000556380 PEG10Q86TG7 708 aaKnown RBP8.09□□□□□ -1.11
SRP54-210ENST00000556380 RDH10Q8IZV5 341 aa8.09□□□□□ -1.11
SRP54-210ENST00000556380 C8orf59Q8N0T1 100 aaPredicted RBP8.09□□□□□ -1.11
SRP54-210ENST00000556380 FTMTQ8N4E7 242 aa8.09□□□□□ -1.11
SRP54-210ENST00000556380 LINC01356Q8N9X3 169 aa8.09□□□□□ -1.11
SRP54-210ENST00000556380 ZNF485Q8NCK3 441 aa8.09□□□□□ -1.11
SRP54-210ENST00000556380 OR1M1Q8NGA1 313 aa8.09□□□□□ -1.11
SRP54-210ENST00000556380 PIGCQ92535 297 aa8.09□□□□□ -1.11
SRP54-210ENST00000556380 GGHQ92820 318 aa8.09□□□□□ -1.11
SRP54-210ENST00000556380 NARFLQ9H6Q4 476 aa8.09□□□□□ -1.11
SRP54-210ENST00000556380 ZNF665Q9H7R5 613 aa8.09□□□□□ -1.11
SRP54-210ENST00000556380 FN3KRPQ9HA64 309 aa8.09□□□□□ -1.11
SRP54-210ENST00000556380 ABCB9Q9NP78 766 aa8.09□□□□□ -1.11
SRP54-210ENST00000556380 UFSP2Q9NUQ7 469 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms