RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-238	ENST00000556288	ZNF442	Q9H7R0	627 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	S100A14	Q9HCY8	104 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	HINT3	Q9NQE9	182 aa	Known RBP	3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	YAE1D1	Q9NRH1	226 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	ZNF701	Q9NV72	531 aa	Predicted RBP	3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	MRPL22	Q9NWU5	206 aa	Known RBP	3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	IMPAD1	Q9NX62	359 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	SLCO1C1	Q9NYB5	712 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	MYEF2	Q9P2K5	600 aa	Known RBP	3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	LAMP5	Q9UJQ1	280 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	LHFPL6	Q9Y693	200 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	FBN2	P35556	2912 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	KIAA2026	Q5HYC2	2103 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	IGHV4-30-2	A0A087WSY4	118 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	ISPD	A4D126	451 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	ARRDC5	A6NEK1	342 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	DNAJC9-AS1	A6NH13	148 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	PRY	O14603	147 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	SURF4	O15260	269 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	PRKY	O43930	277 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	PEX14	O75381	377 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	LY6G6D	O95868	133 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	SBK2	P0C263	348 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	SLC2A1	P11166	492 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	POLR2I	P36954	125 aa	Known RBP	3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	MAGEB1	P43366	347 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	SLC15A1	P46059	708 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	BLVRA	P53004	296 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	SLC25A1	P53007	311 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	RAD23A	P54725	363 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	DSCR9	P59020	149 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	ESRRG	P62508	458 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	TNFAIP6	P98066	277 aa	Predicted RBP	3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	ECH1	Q13011	328 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	PSG7	Q13046	419 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	EFNB3	Q15768	340 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	SNCB	Q16143	134 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	TIGD6	Q17RP2	521 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	LCN1P1	Q5VSP4	162 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	OR2T2	Q6IF00	324 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	C11orf71	Q6IPW1	123 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	FAHD1	Q6P587	224 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	PRSS57	Q6UWY2	283 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	SPNS3	Q6ZMD2	512 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	FOXL2NB	Q6ZUU3	175 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	RFPL4B	Q6ZWI9	263 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	FAM57B	Q71RH2	274 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	MEPCE	Q7L2J0	689 aa	Known RBP	3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	SHF	Q7M4L6	423 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	MRPL21	Q7Z2W9	205 aa	Known RBP	3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	COMMD2	Q86X83	199 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	CBR4	Q8N4T8	237 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	ZNF555	Q8NEP9	628 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	DNAJC9	Q8WXX5	260 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	CCL17	Q92583	94 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	APOBEC3D	Q96AK3	386 aa	Predicted RBP	3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	PGAM5	Q96HS1	289 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	COG8	Q96MW5	612 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	ZNF582	Q96NG8	517 aa	Predicted RBP	3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	TBX5	Q99593	518 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	TEAD3	Q99594	435 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	RBM4B	Q9BQ04	359 aa	Known RBP	3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	PIMREG	Q9BSJ6	248 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	C9orf16	Q9BUW7	83 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	ABHD6	Q9BV23	337 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	RBM4	Q9BWF3	364 aa	Known RBP	3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	OSBPL10	Q9BXB5	764 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	PRSS22	Q9GZN4	317 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	EGLN1	Q9GZT9	426 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	RACGAP1	Q9H0H5	632 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	HDHD2	Q9H0R4	259 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	CXXC4	Q9H2H0	198 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	BATF3	Q9NR55	127 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	CMC2	Q9NRP2	79 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	TMEM100	Q9NV29	134 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	CYB5R1	Q9UHQ9	305 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	ENOPH1	Q9UHY7	261 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	KCNG2	Q9UJ96	466 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	FBXO9	Q9UK97	447 aa	Predicted RBP	3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	IKZF2	Q9UKS7	526 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	GMPPB	Q9Y5P6	360 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	SIRT4	Q9Y6E7	314 aa	Predicted RBP	3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	MAST4	O15021	2626 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	F8	P00451	2351 aa		3.95	□□□□□ -1.78
ATXN3-238	ENST00000556288	FLNA	P21333	2647 aa	Known RBP	3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	IGHV1-69-2	A0A0G2JMI3	117 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	LOC390937	A0A1W2PQ73	354 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	LRP5L	A4QPB2	252 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	C17orf100	A8MU93	164 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	ZNF670-ZNF695	F2Z2N8	137 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288		H0YL77	283 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288		H3BNX3	289 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288		H3BSH0	61 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288		H7C417	338 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288		M0R135	149 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	EI24	O14681	340 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	RRH	O14718	337 aa		3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	MAGEB4	O15481	346 aa	Predicted RBP	3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	RPP14	O95059	124 aa	Known RBP	3.94	□□□□□ -1.78
ATXN3-238	ENST00000556288	SNAP29	O95721	258 aa		3.94	□□□□□ -1.78

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