RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 CNN3Q15417 329 aaKnown RBP12.76□□□□□ -0.37
VPS33B-205ENST00000556096 MOGAT2Q3SYC2 334 aa12.76□□□□□ -0.37
VPS33B-205ENST00000556096 CLVS2Q5SYC1 327 aa12.76□□□□□ -0.37
VPS33B-205ENST00000556096 NSUN5P2Q63ZY6 315 aa12.76□□□□□ -0.37
VPS33B-205ENST00000556096 BTN2A1Q7KYR7 527 aa12.76□□□□□ -0.37
VPS33B-205ENST00000556096 CDH24Q86UP0 819 aa12.76□□□□□ -0.37
VPS33B-205ENST00000556096 CCDC36Q8IYA8 594 aa12.76□□□□□ -0.37
VPS33B-205ENST00000556096 C9orf106Q8NAJ2 232 aa12.76□□□□□ -0.37
VPS33B-205ENST00000556096 SEH1LQ96EE3 360 aa12.76□□□□□ -0.37
VPS33B-205ENST00000556096 CPNE2Q96FN4 548 aaPredicted RBP12.76□□□□□ -0.37
VPS33B-205ENST00000556096 MRPL15Q9P015 296 aaKnown RBP12.76□□□□□ -0.37
VPS33B-205ENST00000556096 ZFYVE26Q68DK2 2539 aa12.76□□□□□ -0.37
VPS33B-205ENST00000556096 IGSF10Q6WRI0 2623 aa12.75□□□□□ -0.37
VPS33B-205ENST00000556096 C5orf49A4QMS7 147 aa12.75□□□□□ -0.37
VPS33B-205ENST00000556096 GMDSO60547 372 aa12.75□□□□□ -0.37
VPS33B-205ENST00000556096 DHFRP00374 187 aa12.75□□□□□ -0.37
VPS33B-205ENST00000556096 SERPINA5P05154 406 aa12.75□□□□□ -0.37
VPS33B-205ENST00000556096 LPLP06858 475 aa12.75□□□□□ -0.37
VPS33B-205ENST00000556096 MELTFP08582 738 aa12.75□□□□□ -0.37
VPS33B-205ENST00000556096 KIR2DL2P43627 348 aaPredicted RBP12.75□□□□□ -0.37
VPS33B-205ENST00000556096 ACTBP60709 375 aa12.75□□□□□ -0.37
VPS33B-205ENST00000556096 ACTG1P63261 375 aa12.75□□□□□ -0.37
VPS33B-205ENST00000556096 GSG1Q2KHT4 349 aa12.75□□□□□ -0.37
VPS33B-205ENST00000556096 TBRG1Q3YBR2 411 aa12.75□□□□□ -0.37
VPS33B-205ENST00000556096 ZNF260Q3ZCT1 412 aa12.75□□□□□ -0.37
VPS33B-205ENST00000556096 PLEKHN1Q494U1 663 aaPredicted RBP12.75□□□□□ -0.37
VPS33B-205ENST00000556096 Q6ZT83 130 aa12.75□□□□□ -0.37
VPS33B-205ENST00000556096 ACBD4Q8NC06 268 aa12.75□□□□□ -0.37
VPS33B-205ENST00000556096 OR6K3Q8NGY3 331 aa12.75□□□□□ -0.37
VPS33B-205ENST00000556096 AQP3Q92482 292 aa12.75□□□□□ -0.37
VPS33B-205ENST00000556096 APOBEC3DQ96AK3 386 aaPredicted RBP12.75□□□□□ -0.37
VPS33B-205ENST00000556096 BOD1Q96IK1 185 aa12.75□□□□□ -0.37
VPS33B-205ENST00000556096 BBC3Q96PG8 261 aaPredicted RBP12.75□□□□□ -0.37
VPS33B-205ENST00000556096 TECTBQ96PL2 329 aa12.75□□□□□ -0.37
VPS33B-205ENST00000556096 ACTR6Q9GZN1 396 aa12.75□□□□□ -0.37
VPS33B-205ENST00000556096 LPAR5Q9H1C0 372 aa12.75□□□□□ -0.37
VPS33B-205ENST00000556096 GPR173Q9NS66 373 aa12.75□□□□□ -0.37
VPS33B-205ENST00000556096 ZNF107Q9UII5 783 aaPredicted RBP12.75□□□□□ -0.37
VPS33B-205ENST00000556096 ALG5Q9Y673 324 aa12.75□□□□□ -0.37
VPS33B-205ENST00000556096 SMG1Q96Q15 3661 aaKnown RBP12.74□□□□□ -0.37
VPS33B-205ENST00000556096 ZNHIT1O43257 154 aa12.74□□□□□ -0.37
VPS33B-205ENST00000556096 CDC14BO60729 498 aa12.74□□□□□ -0.37
VPS33B-205ENST00000556096 NRASP01111 189 aa12.74□□□□□ -0.37
VPS33B-205ENST00000556096 HOXB1P14653 301 aaPredicted RBP12.74□□□□□ -0.37
VPS33B-205ENST00000556096 FAUP35544 74 aaKnown RBP12.74□□□□□ -0.37
VPS33B-205ENST00000556096 GUCA2AQ02747 115 aa12.74□□□□□ -0.37
VPS33B-205ENST00000556096 PCGF3Q3KNV8 242 aa12.74□□□□□ -0.37
VPS33B-205ENST00000556096 HIKESHIQ53FT3 197 aa12.74□□□□□ -0.37
VPS33B-205ENST00000556096 ZNF584Q8IVC4 421 aa12.74□□□□□ -0.37
VPS33B-205ENST00000556096 GCNT2Q8N0V5 402 aa12.74□□□□□ -0.37
VPS33B-205ENST00000556096 OR10R2Q8NGX6 335 aa12.74□□□□□ -0.37
VPS33B-205ENST00000556096 GPR137Q96N19 417 aa12.74□□□□□ -0.37
VPS33B-205ENST00000556096 ZNF75AQ96N20 296 aa12.74□□□□□ -0.37
VPS33B-205ENST00000556096 GAL3ST1Q99999 423 aa12.74□□□□□ -0.37
VPS33B-205ENST00000556096 REPIN1Q9BWE0 567 aaKnown RBP12.74□□□□□ -0.37
VPS33B-205ENST00000556096 CST11Q9H112 138 aa12.74□□□□□ -0.37
VPS33B-205ENST00000556096 MED12LQ86YW9 2145 aa12.74□□□□□ -0.37
VPS33B-205ENST00000556096 ZNF816-ZNF321PA0A0X1KG74 233 aa12.74□□□□□ -0.37
VPS33B-205ENST00000556096 WIPF3A6NGB9 483 aa12.74□□□□□ -0.37
VPS33B-205ENST00000556096 CCNKO75909 580 aa12.74□□□□□ -0.37
VPS33B-205ENST00000556096 PSMB1P20618 241 aaKnown RBP12.74□□□□□ -0.37
VPS33B-205ENST00000556096 IGHV1-2P23083 117 aa12.74□□□□□ -0.37
VPS33B-205ENST00000556096 APLNRP35414 380 aa12.74□□□□□ -0.37
VPS33B-205ENST00000556096 CCR6P51684 374 aa12.74□□□□□ -0.37
VPS33B-205ENST00000556096 MALLQ13021 153 aa12.74□□□□□ -0.37
VPS33B-205ENST00000556096 TMEM104Q8NE00 496 aa12.74□□□□□ -0.37
VPS33B-205ENST00000556096 NPRL2Q8WTW4 380 aa12.74□□□□□ -0.37
VPS33B-205ENST00000556096 TNFAIP8L1Q8WVP5 186 aa12.74□□□□□ -0.37
VPS33B-205ENST00000556096 PIGTQ969N2 578 aa12.74□□□□□ -0.37
VPS33B-205ENST00000556096 URM1Q9BTM9 101 aaKnown RBP12.74□□□□□ -0.37
VPS33B-205ENST00000556096 TMEM59Q9BXS4 323 aa12.74□□□□□ -0.37
VPS33B-205ENST00000556096 OPA3Q9H6K4 179 aa12.74□□□□□ -0.37
VPS33B-205ENST00000556096 PLSCR4Q9NRQ2 329 aa12.74□□□□□ -0.37
VPS33B-205ENST00000556096 NUDT15Q9NV35 164 aa12.74□□□□□ -0.37
VPS33B-205ENST00000556096 ING4Q9UNL4 249 aa12.74□□□□□ -0.37
VPS33B-205ENST00000556096 FAM208BQ5VWN6 2430 aa12.73□□□□□ -0.37
VPS33B-205ENST00000556096 MBD3L4A6NDZ8 208 aaPredicted RBP12.73□□□□□ -0.37
VPS33B-205ENST00000556096 MBD3L3A6NE82 208 aaPredicted RBP12.73□□□□□ -0.37
VPS33B-205ENST00000556096 MBD3L5A6NJ08 208 aaPredicted RBP12.73□□□□□ -0.37
VPS33B-205ENST00000556096 MPIG6BO95866 241 aa12.73□□□□□ -0.37
VPS33B-205ENST00000556096 PRB1P04280 392 aa12.73□□□□□ -0.37
VPS33B-205ENST00000556096 CCNOP22674 350 aa12.73□□□□□ -0.37
VPS33B-205ENST00000556096 VEGFCP49767 419 aa12.73□□□□□ -0.37
VPS33B-205ENST00000556096 MTCP1P56278 107 aa12.73□□□□□ -0.37
VPS33B-205ENST00000556096 CDNFQ49AH0 187 aa12.73□□□□□ -0.37
VPS33B-205ENST00000556096 KRTCAP3Q53RY4 240 aa12.73□□□□□ -0.37
VPS33B-205ENST00000556096 TMEM255AQ5JRV8 349 aa12.73□□□□□ -0.37
VPS33B-205ENST00000556096 ZNF585AQ6P3V2 769 aa12.73□□□□□ -0.37
VPS33B-205ENST00000556096 LHFPL2Q6ZUX7 228 aa12.73□□□□□ -0.37
VPS33B-205ENST00000556096 MDP1Q86V88 176 aa12.73□□□□□ -0.37
VPS33B-205ENST00000556096 FAM89BQ8N5H3 189 aa12.73□□□□□ -0.37
VPS33B-205ENST00000556096 TMEM229BQ8NBD8 167 aa12.73□□□□□ -0.37
VPS33B-205ENST00000556096 OR6F1Q8NGZ6 308 aa12.73□□□□□ -0.37
VPS33B-205ENST00000556096 OR56B4Q8NH76 319 aa12.73□□□□□ -0.37
VPS33B-205ENST00000556096 MBD3L2Q8NHZ7 208 aaPredicted RBP12.73□□□□□ -0.37
VPS33B-205ENST00000556096 UBASH3BQ8TF42 649 aa12.73□□□□□ -0.37
VPS33B-205ENST00000556096 S100A13Q99584 98 aa12.73□□□□□ -0.37
VPS33B-205ENST00000556096 KCNN3Q9UGI6 736 aa12.73□□□□□ -0.37
VPS33B-205ENST00000556096 RTTNQ86VV8 2226 aa12.73□□□□□ -0.37
VPS33B-205ENST00000556096 CRTAPO75718 401 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms