RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 UBBP0CG47 229 aa21.19■□□□□ 0.98
TMEM260-207ENST00000555497 LIPCP11150 499 aa21.19■□□□□ 0.98
TMEM260-207ENST00000555497 MPZP25189 248 aa21.19■□□□□ 0.98
TMEM260-207ENST00000555497 CLDN18P56856 261 aa21.19■□□□□ 0.98
TMEM260-207ENST00000555497 SPEM2Q0P670 501 aa21.19■□□□□ 0.98
TMEM260-207ENST00000555497 RFPL4BQ6ZWI9 263 aa21.19■□□□□ 0.98
TMEM260-207ENST00000555497 SKA3Q8IX90 412 aa21.19■□□□□ 0.98
TMEM260-207ENST00000555497 CCDC107Q8WV48 283 aa21.19■□□□□ 0.98
TMEM260-207ENST00000555497 TTTY12Q9BZ98 90 aa21.19■□□□□ 0.98
TMEM260-207ENST00000555497 MYOZ1Q9NP98 299 aaPredicted RBP21.19■□□□□ 0.98
TMEM260-207ENST00000555497 H3BUI4 141 aa21.19■□□□□ 0.98
TMEM260-207ENST00000555497 MTRF1O75570 445 aaKnown RBP21.19■□□□□ 0.98
TMEM260-207ENST00000555497 GSTP1P09211 210 aaKnown RBP21.19■□□□□ 0.98
TMEM260-207ENST00000555497 ALDH3B1P43353 468 aa21.19■□□□□ 0.98
TMEM260-207ENST00000555497 OR3A3P47888 321 aa21.19■□□□□ 0.98
TMEM260-207ENST00000555497 RPS27AP62979 156 aaKnown RBP21.19■□□□□ 0.98
TMEM260-207ENST00000555497 SCRN3Q0VDG4 424 aa21.19■□□□□ 0.98
TMEM260-207ENST00000555497 TSPO2Q5TGU0 170 aa21.19■□□□□ 0.98
TMEM260-207ENST00000555497 FAM89BQ8N5H3 189 aa21.19■□□□□ 0.98
TMEM260-207ENST00000555497 PNLDC1Q8NA58 520 aaKnown RBP21.19■□□□□ 0.98
TMEM260-207ENST00000555497 GPR173Q9NS66 373 aa21.19■□□□□ 0.98
TMEM260-207ENST00000555497 PMP2P02689 132 aa21.18■□□□□ 0.98
TMEM260-207ENST00000555497 GRK1Q15835 563 aa21.18■□□□□ 0.98
TMEM260-207ENST00000555497 REEP6Q96HR9 211 aa21.18■□□□□ 0.98
TMEM260-207ENST00000555497 CITED4Q96RK1 184 aa21.18■□□□□ 0.98
TMEM260-207ENST00000555497 PRRT1Q99946 306 aa21.18■□□□□ 0.98
TMEM260-207ENST00000555497 OR2H1Q9GZK4 316 aa21.18■□□□□ 0.98
TMEM260-207ENST00000555497 KMT2EQ8IZD2 1858 aa21.17■□□□□ 0.98
TMEM260-207ENST00000555497 OR2AT4A6NND4 320 aa21.17■□□□□ 0.98
TMEM260-207ENST00000555497 MFNGO00587 321 aa21.17■□□□□ 0.98
TMEM260-207ENST00000555497 HTR5AP47898 357 aa21.17■□□□□ 0.98
TMEM260-207ENST00000555497 AIMP2Q13155 320 aaKnown RBP21.17■□□□□ 0.98
TMEM260-207ENST00000555497 ATP1A1-AS1Q5TC04 95 aa21.17■□□□□ 0.98
TMEM260-207ENST00000555497 HAS2Q92819 552 aa21.17■□□□□ 0.98
TMEM260-207ENST00000555497 ABI3Q9P2A4 366 aa21.17■□□□□ 0.98
TMEM260-207ENST00000555497 ANAPC10Q9UM13 185 aa21.17■□□□□ 0.98
TMEM260-207ENST00000555497 TIMM10BQ9Y5J6 103 aa21.17■□□□□ 0.98
TMEM260-207ENST00000555497 CACNA1HO95180 2353 aa21.17■□□□□ 0.98
TMEM260-207ENST00000555497 FOXI3A8MTJ6 420 aaPredicted RBP21.17■□□□□ 0.98
TMEM260-207ENST00000555497 F5H5P2 479 aa21.17■□□□□ 0.98
TMEM260-207ENST00000555497 LINC01387J3KSC0 135 aa21.17■□□□□ 0.98
TMEM260-207ENST00000555497 CFDP00746 253 aaPredicted RBP21.17■□□□□ 0.98
TMEM260-207ENST00000555497 LCATP04180 440 aa21.17■□□□□ 0.98
TMEM260-207ENST00000555497 DHRS2Q13268 280 aa21.17■□□□□ 0.98
TMEM260-207ENST00000555497 PDSS1Q5T2R2 415 aa21.17■□□□□ 0.98
TMEM260-207ENST00000555497 SLC16A14Q7RTX9 510 aa21.17■□□□□ 0.98
TMEM260-207ENST00000555497 FAM109AQ8N4B1 249 aa21.17■□□□□ 0.98
TMEM260-207ENST00000555497 C12orf45Q8N5I9 185 aaPredicted RBP21.17■□□□□ 0.98
TMEM260-207ENST00000555497 TMEM251Q8N6I4 163 aa21.17■□□□□ 0.98
TMEM260-207ENST00000555497 SEMA6DQ8NFY4 1073 aa21.17■□□□□ 0.98
TMEM260-207ENST00000555497 OR56B1Q8NGI3 324 aa21.17■□□□□ 0.98
TMEM260-207ENST00000555497 OR51T1Q8NGJ9 327 aa21.17■□□□□ 0.98
TMEM260-207ENST00000555497 SUN5Q8TC36 379 aa21.17■□□□□ 0.98
TMEM260-207ENST00000555497 TMEM45BQ96B21 275 aa21.17■□□□□ 0.98
TMEM260-207ENST00000555497 FN3KRPQ9HA64 309 aa21.17■□□□□ 0.98
TMEM260-207ENST00000555497 SLC22A5O76082 557 aa21.16■□□□□ 0.98
TMEM260-207ENST00000555497 MGMTP16455 207 aa21.16■□□□□ 0.98
TMEM260-207ENST00000555497 SERPINA2P20848 420 aa21.16■□□□□ 0.98
TMEM260-207ENST00000555497 LY6G6FQ5SQ64 297 aa21.16■□□□□ 0.98
TMEM260-207ENST00000555497 C10orf35Q96D05 121 aa21.16■□□□□ 0.98
TMEM260-207ENST00000555497 ELMOD3Q96FG2 381 aa21.16■□□□□ 0.98
TMEM260-207ENST00000555497 URM1Q9BTM9 101 aaKnown RBP21.16■□□□□ 0.98
TMEM260-207ENST00000555497 TMPRSS13Q9BYE2 586 aa21.16■□□□□ 0.98
TMEM260-207ENST00000555497 B4GALT7Q9UBV7 327 aa21.16■□□□□ 0.98
TMEM260-207ENST00000555497 PLEKHA6Q9Y2H5 1048 aa21.16■□□□□ 0.98
TMEM260-207ENST00000555497 NOSIPQ9Y314 301 aaKnown RBP21.16■□□□□ 0.98
TMEM260-207ENST00000555497 IGKV3D-15A0A087WSY6 115 aa21.16■□□□□ 0.98
TMEM260-207ENST00000555497 TPD52L2O43399 206 aaKnown RBP21.16■□□□□ 0.98
TMEM260-207ENST00000555497 MICBQ29980 383 aa21.16■□□□□ 0.98
TMEM260-207ENST00000555497 SMUG1Q53HV7 270 aa21.16■□□□□ 0.98
TMEM260-207ENST00000555497 CST11Q9H112 138 aa21.16■□□□□ 0.98
TMEM260-207ENST00000555497 MCRIP1C9JLW8 97 aa21.15■□□□□ 0.98
TMEM260-207ENST00000555497 ZNF708P17019 499 aa21.15■□□□□ 0.98
TMEM260-207ENST00000555497 NAT1P18440 290 aa21.15■□□□□ 0.98
TMEM260-207ENST00000555497 OR4K15Q8NH41 348 aa21.15■□□□□ 0.98
TMEM260-207ENST00000555497 SLC7A10Q9NS82 523 aa21.15■□□□□ 0.98
TMEM260-207ENST00000555497 GHRLQ9UBU3 117 aa21.15■□□□□ 0.98
TMEM260-207ENST00000555497 MMP7P09237 267 aaPredicted RBP21.14■□□□□ 0.98
TMEM260-207ENST00000555497 NFYAP23511 347 aaPredicted RBP21.14■□□□□ 0.98
TMEM260-207ENST00000555497 MPPED2Q15777 294 aa21.14■□□□□ 0.98
TMEM260-207ENST00000555497 GALNTL5Q7Z4T8 443 aa21.14■□□□□ 0.98
TMEM260-207ENST00000555497 SLC25A42Q86VD7 318 aa21.14■□□□□ 0.98
TMEM260-207ENST00000555497 CCDC54Q8NEL0 328 aa21.14■□□□□ 0.98
TMEM260-207ENST00000555497 FBXW5Q969U6 566 aa21.14■□□□□ 0.98
TMEM260-207ENST00000555497 MRPL33O75394 65 aaKnown RBP21.14■□□□□ 0.97
TMEM260-207ENST00000555497 OPCMLQ14982 345 aa21.14■□□□□ 0.97
TMEM260-207ENST00000555497 PNLIPRP3Q17RR3 467 aa21.14■□□□□ 0.97
TMEM260-207ENST00000555497 TUSC5Q8IXB3 177 aa21.14■□□□□ 0.97
TMEM260-207ENST00000555497 IL22RA1Q8N6P7 574 aa21.14■□□□□ 0.97
TMEM260-207ENST00000555497 ZBTB25P24278 435 aa21.13■□□□□ 0.97
TMEM260-207ENST00000555497 EXOSC2Q13868 293 aaKnown RBP21.13■□□□□ 0.97
TMEM260-207ENST00000555497 TRIP6Q15654 476 aaKnown RBP21.13■□□□□ 0.97
TMEM260-207ENST00000555497 C11orf88Q6PI97 169 aa21.13■□□□□ 0.97
TMEM260-207ENST00000555497 ADAD2Q8NCV1 583 aaKnown RBP21.13■□□□□ 0.97
TMEM260-207ENST00000555497 OCSTAMPQ9BR26 566 aa21.13■□□□□ 0.97
TMEM260-207ENST00000555497 IGKV1-27A0A075B6S5 117 aa21.13■□□□□ 0.97
TMEM260-207ENST00000555497 TBPP20226 339 aa21.13■□□□□ 0.97
TMEM260-207ENST00000555497 BLVRBP30043 206 aaPredicted RBP21.13■□□□□ 0.97
TMEM260-207ENST00000555497 FOXG1P55316 489 aaPredicted RBP21.13■□□□□ 0.97
TMEM260-207ENST00000555497 ZMYND11Q15326 602 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms