RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 ELMOD2Q8IZ81 293 aa10.16□□□□□ -0.78
SRP54-206ENST00000555317 ACBD7Q8N6N7 88 aa10.16□□□□□ -0.78
SRP54-206ENST00000555317 SETD9Q8NE22 299 aa10.16□□□□□ -0.78
SRP54-206ENST00000555317 DEFB108BQ8NET1 73 aa10.16□□□□□ -0.78
SRP54-206ENST00000555317 OR1M1Q8NGA1 313 aa10.16□□□□□ -0.78
SRP54-206ENST00000555317 OR8B3Q8NGG8 313 aa10.16□□□□□ -0.78
SRP54-206ENST00000555317 ITPKCQ96DU7 683 aa10.16□□□□□ -0.78
SRP54-206ENST00000555317 RNF170Q96K19 258 aa10.16□□□□□ -0.78
SRP54-206ENST00000555317 OR8B2Q96RD0 313 aa10.16□□□□□ -0.78
SRP54-206ENST00000555317 LRCH1Q9Y2L9 728 aa10.16□□□□□ -0.78
SRP54-206ENST00000555317 RPL36Q9Y3U8 105 aaKnown RBP10.16□□□□□ -0.78
SRP54-206ENST00000555317 SVEP1Q4LDE5 3571 aa10.16□□□□□ -0.78
SRP54-206ENST00000555317 ARHGAP32A7KAX9 2087 aa10.16□□□□□ -0.78
SRP54-206ENST00000555317 TRAV38-1A0A0B4J264 116 aa10.15□□□□□ -0.78
SRP54-206ENST00000555317 E9PQ18 207 aa10.15□□□□□ -0.78
SRP54-206ENST00000555317 C3orf80F5H4A9 247 aa10.15□□□□□ -0.78
SRP54-206ENST00000555317 LGALS8O00214 317 aa10.15□□□□□ -0.78
SRP54-206ENST00000555317 P2RY10O00398 339 aa10.15□□□□□ -0.78
SRP54-206ENST00000555317 SYT7O43581 403 aa10.15□□□□□ -0.78
SRP54-206ENST00000555317 FSTL3O95633 263 aa10.15□□□□□ -0.78
SRP54-206ENST00000555317 TTRP02766 147 aa10.15□□□□□ -0.78
SRP54-206ENST00000555317 DBTP11182 482 aaKnown RBP10.15□□□□□ -0.78
SRP54-206ENST00000555317 FAHP16930 419 aa10.15□□□□□ -0.78
SRP54-206ENST00000555317 CD80P33681 288 aa10.15□□□□□ -0.78
SRP54-206ENST00000555317 GPM6AP51674 278 aa10.15□□□□□ -0.78
SRP54-206ENST00000555317 GNB2P62879 340 aa10.15□□□□□ -0.78
SRP54-206ENST00000555317 RAB40BQ12829 278 aa10.15□□□□□ -0.78
SRP54-206ENST00000555317 ZNF404Q494X3 552 aa10.15□□□□□ -0.78
SRP54-206ENST00000555317 TP53I3Q53FA7 332 aa10.15□□□□□ -0.78
SRP54-206ENST00000555317 FAM201AQ5SY85 155 aa10.15□□□□□ -0.78
SRP54-206ENST00000555317 ZNF684Q5T5D7 378 aa10.15□□□□□ -0.78
SRP54-206ENST00000555317 LIPNQ5VXI9 398 aa10.15□□□□□ -0.78
SRP54-206ENST00000555317 DCDC5Q6ZRR9 648 aa10.15□□□□□ -0.78
SRP54-206ENST00000555317 DOK3Q7L591 496 aa10.15□□□□□ -0.78
SRP54-206ENST00000555317 KCTD20Q7Z5Y7 419 aa10.15□□□□□ -0.78
SRP54-206ENST00000555317 CATSPERDQ86XM0 798 aa10.15□□□□□ -0.78
SRP54-206ENST00000555317 DHRSXQ8N5I4 330 aa10.15□□□□□ -0.78
SRP54-206ENST00000555317 RHOXF1Q8NHV9 184 aa10.15□□□□□ -0.78
SRP54-206ENST00000555317 LRRC29Q8WV35 223 aa10.15□□□□□ -0.78
SRP54-206ENST00000555317 OR5P3Q8WZ94 311 aa10.15□□□□□ -0.78
SRP54-206ENST00000555317 LGALS12Q96DT0 336 aa10.15□□□□□ -0.78
SRP54-206ENST00000555317 NEIL1Q96FI4 390 aaPredicted RBP10.15□□□□□ -0.78
SRP54-206ENST00000555317 TMEM246Q9BRR3 403 aa10.15□□□□□ -0.78
SRP54-206ENST00000555317 SSBP3Q9BWW4 388 aaPredicted RBP10.15□□□□□ -0.78
SRP54-206ENST00000555317 DCLRE1BQ9H816 532 aa10.15□□□□□ -0.78
SRP54-206ENST00000555317 TMEM165Q9HC07 324 aa10.15□□□□□ -0.78
SRP54-206ENST00000555317 G6PC2Q9NQR9 355 aa10.15□□□□□ -0.78
SRP54-206ENST00000555317 ACOXLQ9NUZ1 547 aa10.15□□□□□ -0.78
SRP54-206ENST00000555317 AASSQ9UDR5 926 aa10.15□□□□□ -0.78
SRP54-206ENST00000555317 ANK3Q12955 4377 aaKnown RBP10.14□□□□□ -0.79
SRP54-206ENST00000555317 OOEPA6NGQ2 149 aa10.14□□□□□ -0.79
SRP54-206ENST00000555317 OR5B21A6NL26 309 aa10.14□□□□□ -0.79
SRP54-206ENST00000555317 H0YHG0 523 aa10.14□□□□□ -0.79
SRP54-206ENST00000555317 J3QLI3 93 aa10.14□□□□□ -0.79
SRP54-206ENST00000555317 SRSF10O75494 262 aaKnown RBP10.14□□□□□ -0.79
SRP54-206ENST00000555317 NRASP01111 189 aa10.14□□□□□ -0.79
SRP54-206ENST00000555317 HTR1AP08908 422 aa10.14□□□□□ -0.79
SRP54-206ENST00000555317 UBCP0CG48 685 aaKnown RBP10.14□□□□□ -0.79
SRP54-206ENST00000555317 GABRB1P18505 474 aa10.14□□□□□ -0.79
SRP54-206ENST00000555317 PITPNBP48739 271 aa10.14□□□□□ -0.79
SRP54-206ENST00000555317 CSNK2BP67870 215 aa10.14□□□□□ -0.79
SRP54-206ENST00000555317 ZNF85Q03923 595 aa10.14□□□□□ -0.79
SRP54-206ENST00000555317 ZNF154Q13106 437 aa10.14□□□□□ -0.79
SRP54-206ENST00000555317 MICBQ29980 383 aa10.14□□□□□ -0.79
SRP54-206ENST00000555317 CEACAM21Q3KPI0 293 aa10.14□□□□□ -0.79
SRP54-206ENST00000555317 KLHL22Q53GT1 634 aa10.14□□□□□ -0.79
SRP54-206ENST00000555317 CEP78Q5JTW2 689 aa10.14□□□□□ -0.79
SRP54-206ENST00000555317 CLVS2Q5SYC1 327 aa10.14□□□□□ -0.79
SRP54-206ENST00000555317 SFRP4Q6FHJ7 346 aaPredicted RBP10.14□□□□□ -0.79
SRP54-206ENST00000555317 ZNF826PQ6ZT77 177 aa10.14□□□□□ -0.79
SRP54-206ENST00000555317 MOB3CQ70IA8 216 aa10.14□□□□□ -0.79
SRP54-206ENST00000555317 C19orf18Q8NEA5 215 aa10.14□□□□□ -0.79
SRP54-206ENST00000555317 CCDC54Q8NEL0 328 aa10.14□□□□□ -0.79
SRP54-206ENST00000555317 RORBQ92753 470 aa10.14□□□□□ -0.79
SRP54-206ENST00000555317 PPP1R14AQ96A00 147 aa10.14□□□□□ -0.79
SRP54-206ENST00000555317 ALG8Q9BVK2 526 aa10.14□□□□□ -0.79
SRP54-206ENST00000555317 RNPEPL1Q9HAU8 725 aa10.14□□□□□ -0.79
SRP54-206ENST00000555317 AMBNQ9NP70 447 aa10.14□□□□□ -0.79
SRP54-206ENST00000555317 INPP5EQ9NRR6 644 aa10.14□□□□□ -0.79
SRP54-206ENST00000555317 CLN8Q9UBY8 286 aa10.14□□□□□ -0.79
SRP54-206ENST00000555317 SLC22A13Q9Y226 551 aa10.14□□□□□ -0.79
SRP54-206ENST00000555317 EXOGQ9Y2C4 368 aaKnown RBP10.14□□□□□ -0.79
SRP54-206ENST00000555317 COL6A5A8TX70 2615 aa10.14□□□□□ -0.79
SRP54-206ENST00000555317 IRGMA1A4Y4 181 aa10.13□□□□□ -0.79
SRP54-206ENST00000555317 DHRS7CA6NNS2 312 aa10.13□□□□□ -0.79
SRP54-206ENST00000555317 ZNF732B4DXR9 585 aa10.13□□□□□ -0.79
SRP54-206ENST00000555317 F5H0A9 414 aaPredicted RBP10.13□□□□□ -0.79
SRP54-206ENST00000555317 J3QLW9 94 aa10.13□□□□□ -0.79
SRP54-206ENST00000555317 CDIPTO14735 213 aa10.13□□□□□ -0.79
SRP54-206ENST00000555317 PHF1O43189 567 aaPredicted RBP10.13□□□□□ -0.79
SRP54-206ENST00000555317 NDUFA2O43678 99 aa10.13□□□□□ -0.79
SRP54-206ENST00000555317 IGLV3-1P01715 115 aa10.13□□□□□ -0.79
SRP54-206ENST00000555317 ZNF12P17014 697 aa10.13□□□□□ -0.79
SRP54-206ENST00000555317 ZNF19P17023 458 aa10.13□□□□□ -0.79
SRP54-206ENST00000555317 THBS2P35442 1172 aa10.13□□□□□ -0.79
SRP54-206ENST00000555317 PSMB10P40306 273 aa10.13□□□□□ -0.79
SRP54-206ENST00000555317 GNG3P63215 75 aa10.13□□□□□ -0.79
SRP54-206ENST00000555317 ELF3P78545 371 aaPredicted RBP10.13□□□□□ -0.79
SRP54-206ENST00000555317 IL18R1Q13478 541 aa10.13□□□□□ -0.79
SRP54-206ENST00000555317 KRTAP21-3Q3LHN1 58 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms