RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 C11orf54Q9H0W9 315 aaPredicted RBP6.23□□□□□ -1.41
SYNE2-216ENST00000555002 DPH3P1Q9H4G8 78 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 NAT8BQ9UHF3 227 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 GDF2Q9UK05 429 aaPredicted RBP6.23□□□□□ -1.41
SYNE2-216ENST00000555002 IGKV3D-11A0A0A0MRZ8 115 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 M0QZQ0 153 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 CXCL13O43927 109 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 IGKV3-11P04433 115 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 UBE2MP61081 183 aaKnown RBP6.23□□□□□ -1.41
SYNE2-216ENST00000555002 AGERQ15109 404 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 ELAVL1Q15717 326 aaKnown RBP6.23□□□□□ -1.41
SYNE2-216ENST00000555002 LYRM7Q5U5X0 104 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 AMMECR1LQ6DCA0 310 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 Q7L0L9 218 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 RBPMSQ93062 196 aaKnown RBP6.23□□□□□ -1.41
SYNE2-216ENST00000555002 C3orf30Q96M34 536 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 BET1LQ9NYM9 111 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 TAAR3PQ9P1P4 343 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 PSG11Q9UQ72 335 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 CTNSO60931 367 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 TNFRSF1AP19438 455 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 ORM2P19652 201 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 CD80P33681 288 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 LRRC26Q2I0M4 334 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 DEFB124Q8NES8 71 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 OR5AP2Q8NGF4 316 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 SLC37A2Q8TED4 501 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 NEURL3Q96EH8 262 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 WSB2Q9NYS7 404 aaPredicted RBP6.23□□□□□ -1.41
SYNE2-216ENST00000555002 CAMTA1Q9Y6Y1 1673 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 CASP8AP2Q9UKL3 1982 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 DSCR3O14972 297 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 TMPRSS11DO60235 418 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 PRSS1P07477 247 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 RANP62826 216 aaKnown RBP6.23□□□□□ -1.41
SYNE2-216ENST00000555002 ZFAND2BQ8WV99 257 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 PDXPQ96GD0 296 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 PIGMQ9H3S5 423 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 SLC7A10Q9NS82 523 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 MOB4Q9Y3A3 225 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 KCNMB2Q9Y691 235 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 DOCK6Q96HP0 2047 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 NUDT3O95989 172 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 ZBTB25P24278 435 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 TFPI2P48307 235 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 SPEM2Q0P670 501 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 SIX1Q15475 284 aaPredicted RBP6.23□□□□□ -1.41
SYNE2-216ENST00000555002 SIAH1Q8IUQ4 282 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 CELF2-AS1Q8N7Q2 184 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 NUDCD2Q8WVJ2 157 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 IL17BQ9UHF5 180 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 AMMECR1Q9Y4X0 333 aaPredicted RBP6.23□□□□□ -1.41
SYNE2-216ENST00000555002 IGHV3-43A0A0B4J1X8 118 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 ZNF324O75467 553 aaPredicted RBP6.23□□□□□ -1.41
SYNE2-216ENST00000555002 IGHV3-43DP0DP04 118 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 LGALS7P47929 136 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 PRSS8Q16651 343 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 DRAXINQ8NBI3 349 aaPredicted RBP6.23□□□□□ -1.41
SYNE2-216ENST00000555002 ADGRL4Q9HBW9 690 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 A4GNTQ9UNA3 340 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 SHISA8B8ZZ34 492 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 FURINP09958 794 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 CDAP32320 146 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 SRSF9Q13242 221 aaKnown RBP eCLIP6.23□□□□□ -1.41
SYNE2-216ENST00000555002 SHHQ15465 462 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 MICBQ29980 383 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 FAAP20Q6NZ36 180 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 WDR74Q6RFH5 385 aaPredicted RBP6.23□□□□□ -1.41
SYNE2-216ENST00000555002 OXGR1Q96P68 337 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 PBOV1Q9GZY1 135 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 SLC26A1Q9H2B4 701 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 ST3GAL6Q9Y274 331 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 VSIG4Q9Y279 399 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 SHANK1Q9Y566 2161 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 U3KQ87 197 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 ADPRHP54922 357 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 FGF8P55075 233 aaPredicted RBP6.22□□□□□ -1.41
SYNE2-216ENST00000555002 VRK3Q8IV63 474 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 TMEM99Q8N816 258 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 ZNF519Q8TB69 540 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 SLC25A32Q9H2D1 315 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 UBQLN3Q9H347 655 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 GPR45Q9Y5Y3 372 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 DOCK5Q9H7D0 1870 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 LAMB4A4D0S4 1761 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 TMEM200CA6NKL6 621 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 H3BP45 60 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 SIAH2O43255 324 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 ACTL6AO96019 429 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 TCRBP04435 133 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 EMDP50402 254 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 DGCR2P98153 550 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 MOGAT2Q3SYC2 334 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 THSD4Q6ZMP0 1018 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 CBLL1Q75N03 491 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 RBM45Q8IUH3 476 aaKnown RBP6.22□□□□□ -1.41
SYNE2-216ENST00000555002 WDTC1Q8N5D0 677 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 LKAAEAR1Q8TD35 194 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 TM4SF18Q96CE8 201 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 DDX60Q8IY21 1712 aaKnown RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms