RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 MBD3L3A6NE82 208 aaPredicted RBP7.71□□□□□ -1.18
TDP1-210ENST00000554976 MBD3L5A6NJ08 208 aaPredicted RBP7.71□□□□□ -1.18
TDP1-210ENST00000554976 SULT1C2O00338 296 aa7.71□□□□□ -1.18
TDP1-210ENST00000554976 GMDSO60547 372 aa7.71□□□□□ -1.18
TDP1-210ENST00000554976 TNFSF13O75888 250 aa7.71□□□□□ -1.18
TDP1-210ENST00000554976 CNOT4O95628 575 aaKnown RBP7.71□□□□□ -1.18
TDP1-210ENST00000554976 ZNF14P17017 642 aaPredicted RBP7.71□□□□□ -1.18
TDP1-210ENST00000554976 EIF2S3P41091 472 aaKnown RBP7.71□□□□□ -1.18
TDP1-210ENST00000554976 SLC6A9P48067 706 aa7.71□□□□□ -1.18
TDP1-210ENST00000554976 GSK3AP49840 483 aa7.71□□□□□ -1.18
TDP1-210ENST00000554976 GUCA2AQ02747 115 aa7.71□□□□□ -1.18
TDP1-210ENST00000554976 FOXC1Q12948 553 aa7.71□□□□□ -1.18
TDP1-210ENST00000554976 DAZAP2Q15038 168 aaPredicted RBP7.71□□□□□ -1.18
TDP1-210ENST00000554976 ZBTB37Q5TC79 503 aa7.71□□□□□ -1.18
TDP1-210ENST00000554976 OR10K2Q6IF99 312 aa7.71□□□□□ -1.18
TDP1-210ENST00000554976 C1QL2Q7Z5L3 287 aa7.71□□□□□ -1.18
TDP1-210ENST00000554976 MYPOPQ86VE0 399 aaPredicted RBP7.71□□□□□ -1.18
TDP1-210ENST00000554976 TOMM5Q8N4H5 51 aa7.71□□□□□ -1.18
TDP1-210ENST00000554976 FAM89BQ8N5H3 189 aa7.71□□□□□ -1.18
TDP1-210ENST00000554976 JAGN1Q8N5M9 183 aa7.71□□□□□ -1.18
TDP1-210ENST00000554976 MBD3L2Q8NHZ7 208 aaPredicted RBP7.71□□□□□ -1.18
TDP1-210ENST00000554976 FCAMRQ8WWV6 532 aa7.71□□□□□ -1.18
TDP1-210ENST00000554976 WNT2BQ93097 391 aa7.71□□□□□ -1.18
TDP1-210ENST00000554976 SEH1LQ96EE3 360 aa7.71□□□□□ -1.18
TDP1-210ENST00000554976 CCDC120Q96HB5 630 aa7.71□□□□□ -1.18
TDP1-210ENST00000554976 ELF5Q9UKW6 265 aaPredicted RBP7.71□□□□□ -1.18
TDP1-210ENST00000554976 A0A096LPE4 126 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 A0A1W2PPZ6 126 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 C7orf66A4D0T2 115 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 GFRA3O60609 400 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 CDC14BO60729 498 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 TOXO94900 526 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 ECDO95905 644 aaPredicted RBP7.7□□□□□ -1.18
TDP1-210ENST00000554976 HLA-HP01893 362 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 GNALP38405 381 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 WNT5AP41221 380 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 TDGF1P3P51864 188 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 Q5BKY6 102 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 RNASE12Q5GAN4 147 aaKnown RBP7.7□□□□□ -1.18
TDP1-210ENST00000554976 NSUN5P2Q63ZY6 315 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 ZNF57Q68EA5 555 aaPredicted RBP7.7□□□□□ -1.18
TDP1-210ENST00000554976 FAM214BQ7L5A3 538 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 DPPA2Q7Z7J5 298 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 LUZP2Q86TE4 346 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 TM2D1Q9BX74 207 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.7□□□□□ -1.18
TDP1-210ENST00000554976 UPB1Q9UBR1 384 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 BOLA1Q9Y3E2 137 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 KLF2Q9Y5W3 355 aaPredicted RBP7.7□□□□□ -1.18
TDP1-210ENST00000554976 K7ENP7 123 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 ZNF780AO75290 641 aaPredicted RBP7.7□□□□□ -1.18
TDP1-210ENST00000554976 FARS2O95363 451 aaKnown RBP7.7□□□□□ -1.18
TDP1-210ENST00000554976 MT-ND4P03905 459 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 ARR3P36575 388 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 BAMBIQ13145 260 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 HIKESHIQ53FT3 197 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 INO80CQ6PI98 192 aaPredicted RBP7.7□□□□□ -1.18
TDP1-210ENST00000554976 NOXA1Q86UR1 476 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 Q8NA96 180 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 TMEM104Q8NE00 496 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 SEMA6DQ8NFY4 1073 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 SNAPC3Q92966 411 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 GPR137Q96N19 417 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 SPACA5Q96QH8 159 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 TRIB1Q96RU8 372 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 NICN1Q9BSH3 213 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 REPIN1Q9BWE0 567 aaKnown RBP7.7□□□□□ -1.18
TDP1-210ENST00000554976 ATG5Q9H1Y0 275 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 C12orf49Q9H741 205 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 PLSCR4Q9NRQ2 329 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 KCNK7Q9Y2U2 307 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 FAM215AQ9Y5M1 114 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 ALG5Q9Y673 324 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 AUP1Q9Y679 476 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 AHRRA9YTQ3 701 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 XRCC2O43543 280 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 SSX5O60225 188 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 CD74P04233 296 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 STOMP27105 288 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 RAG2P55895 527 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 FOXF2Q12947 444 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 KISS1Q15726 138 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 PLEKHN1Q494U1 663 aaPredicted RBP7.7□□□□□ -1.18
TDP1-210ENST00000554976 C9orf135Q5VTT2 229 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 ANGPTL5Q86XS5 388 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 ENKURQ8TC29 256 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 SARAFQ96BY9 339 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 GHITMQ9H3K2 345 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 MRPS28Q9Y2Q9 187 aaKnown RBP7.7□□□□□ -1.18
TDP1-210ENST00000554976 MRPS7Q9Y2R9 242 aaKnown RBP7.7□□□□□ -1.18
TDP1-210ENST00000554976 NUBP2Q9Y5Y2 271 aa7.7□□□□□ -1.18
TDP1-210ENST00000554976 HMX3A6NHT5 357 aa7.69□□□□□ -1.18
TDP1-210ENST00000554976 MSTNO14793 375 aa7.69□□□□□ -1.18
TDP1-210ENST00000554976 TCRBP04435 133 aa7.69□□□□□ -1.18
TDP1-210ENST00000554976 ZNF735P0CB33 412 aa7.69□□□□□ -1.18
TDP1-210ENST00000554976 CCR6P51684 374 aa7.69□□□□□ -1.18
TDP1-210ENST00000554976 GABRA6Q16445 453 aa7.69□□□□□ -1.18
TDP1-210ENST00000554976 TATDN3Q17R31 274 aa7.69□□□□□ -1.18
TDP1-210ENST00000554976 GFOD2Q3B7J2 385 aa7.69□□□□□ -1.18
TDP1-210ENST00000554976 TBRG1Q3YBR2 411 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms