RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 CD3DP04234 171 aa9.79□□□□□ -0.84
SRP54-205ENST00000554803 F13BP05160 661 aa9.79□□□□□ -0.84
SRP54-205ENST00000554803 NR2C1P13056 603 aa9.79□□□□□ -0.84
SRP54-205ENST00000554803 MSX1P28360 303 aa9.79□□□□□ -0.84
SRP54-205ENST00000554803 CD34P28906 385 aa9.79□□□□□ -0.84
SRP54-205ENST00000554803 GRPRP30550 384 aa9.79□□□□□ -0.84
SRP54-205ENST00000554803 APOBEC1P41238 236 aaKnown RBP9.79□□□□□ -0.84
SRP54-205ENST00000554803 CX3CR1P49238 355 aa9.79□□□□□ -0.84
SRP54-205ENST00000554803 STARP49675 285 aa9.79□□□□□ -0.84
SRP54-205ENST00000554803 PMP22Q01453 160 aa9.79□□□□□ -0.84
SRP54-205ENST00000554803 ZNF117Q03924 483 aa9.79□□□□□ -0.84
SRP54-205ENST00000554803 TFF3Q07654 80 aa9.79□□□□□ -0.84
SRP54-205ENST00000554803 ZNF273Q14593 569 aa9.79□□□□□ -0.84
SRP54-205ENST00000554803 ACKR1Q16570 336 aa9.79□□□□□ -0.84
SRP54-205ENST00000554803 KRTCAP3Q53RY4 240 aa9.79□□□□□ -0.84
SRP54-205ENST00000554803 RNASE10Q5GAN6 216 aaKnown RBP9.79□□□□□ -0.84
SRP54-205ENST00000554803 C1orf140Q5VVS0 124 aa9.79□□□□□ -0.84
SRP54-205ENST00000554803 RTL6Q6ICC9 239 aa9.79□□□□□ -0.84
SRP54-205ENST00000554803 C11orf87Q6NUJ2 197 aa9.79□□□□□ -0.84
SRP54-205ENST00000554803 TMEM81Q6P7N7 255 aa9.79□□□□□ -0.84
SRP54-205ENST00000554803 C16orf47Q6ZP98 133 aaPredicted RBP9.79□□□□□ -0.84
SRP54-205ENST00000554803 LYG2Q86SG7 212 aa9.79□□□□□ -0.84
SRP54-205ENST00000554803 STEAP2Q8NFT2 490 aa9.79□□□□□ -0.84
SRP54-205ENST00000554803 MFSD8Q8NHS3 518 aa9.79□□□□□ -0.84
SRP54-205ENST00000554803 STOML3Q8TAV4 291 aa9.79□□□□□ -0.84
SRP54-205ENST00000554803 MITD1Q8WV92 249 aa9.79□□□□□ -0.84
SRP54-205ENST00000554803 ST8SIA4Q92187 359 aa9.79□□□□□ -0.84
SRP54-205ENST00000554803 AQP3Q92482 292 aa9.79□□□□□ -0.84
SRP54-205ENST00000554803 SLC25A44Q96H78 314 aaPredicted RBP9.79□□□□□ -0.84
SRP54-205ENST00000554803 IMMP1LQ96LU5 166 aa9.79□□□□□ -0.84
SRP54-205ENST00000554803 TSSK2Q96PF2 358 aa9.79□□□□□ -0.84
SRP54-205ENST00000554803 GAL3ST4Q96RP7 486 aa9.79□□□□□ -0.84
SRP54-205ENST00000554803 VKORC1Q9BQB6 163 aa9.79□□□□□ -0.84
SRP54-205ENST00000554803 NXF5Q9H1B4 397 aaKnown RBP9.79□□□□□ -0.84
SRP54-205ENST00000554803 LIME1Q9H400 295 aa9.79□□□□□ -0.84
SRP54-205ENST00000554803 POFUT1Q9H488 388 aa9.79□□□□□ -0.84
SRP54-205ENST00000554803 MPDZO75970 2070 aa9.79□□□□□ -0.84
SRP54-205ENST00000554803 CHD3Q12873 2000 aaKnown RBP9.78□□□□□ -0.84
SRP54-205ENST00000554803 TMED7-TICAM2A0A0A6YYA0 188 aa9.78□□□□□ -0.84
SRP54-205ENST00000554803 RNF222A6NCQ9 220 aa9.78□□□□□ -0.84
SRP54-205ENST00000554803 OR5H14A6NHG9 310 aa9.78□□□□□ -0.84
SRP54-205ENST00000554803 CEACAM18A8MTB9 384 aa9.78□□□□□ -0.84
SRP54-205ENST00000554803 PLPP3O14495 311 aa9.78□□□□□ -0.84
SRP54-205ENST00000554803 ADAM10O14672 748 aa9.78□□□□□ -0.84
SRP54-205ENST00000554803 ZNF208O43345 1280 aa9.78□□□□□ -0.84
SRP54-205ENST00000554803 SRSF10O75494 262 aaKnown RBP9.78□□□□□ -0.84
SRP54-205ENST00000554803 F10P00742 488 aa9.78□□□□□ -0.84
SRP54-205ENST00000554803 AMY2AP04746 511 aa9.78□□□□□ -0.84
SRP54-205ENST00000554803 GSTP1P09211 210 aaKnown RBP9.78□□□□□ -0.84
SRP54-205ENST00000554803 SPARCP09486 303 aa9.78□□□□□ -0.84
SRP54-205ENST00000554803 PET100P0DJ07 73 aa9.78□□□□□ -0.84
SRP54-205ENST00000554803 RAB3AP20336 220 aa9.78□□□□□ -0.84
SRP54-205ENST00000554803 RNF4P78317 190 aa9.78□□□□□ -0.84
SRP54-205ENST00000554803 PLCXD2Q0VAA5 305 aa9.78□□□□□ -0.84
SRP54-205ENST00000554803 PMPCAQ10713 525 aa9.78□□□□□ -0.84
SRP54-205ENST00000554803 EIF2B1Q14232 305 aaKnown RBP9.78□□□□□ -0.84
SRP54-205ENST00000554803 PAN3Q58A45 887 aaKnown RBP9.78□□□□□ -0.84
SRP54-205ENST00000554803 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.78□□□□□ -0.84
SRP54-205ENST00000554803 PRR22Q8IZ63 422 aa9.78□□□□□ -0.84
SRP54-205ENST00000554803 BPIFB2Q8N4F0 458 aa9.78□□□□□ -0.84
SRP54-205ENST00000554803 SLC22A24Q8N4F4 322 aa9.78□□□□□ -0.84
SRP54-205ENST00000554803 ARRDC1Q8N5I2 433 aa9.78□□□□□ -0.84
SRP54-205ENST00000554803 ZNF441Q8N8Z8 693 aa9.78□□□□□ -0.84
SRP54-205ENST00000554803 INO80EQ8NBZ0 244 aaPredicted RBP9.78□□□□□ -0.84
SRP54-205ENST00000554803 OR13C3Q8NGS6 347 aa9.78□□□□□ -0.84
SRP54-205ENST00000554803 COQ8AQ8NI60 647 aa9.78□□□□□ -0.84
SRP54-205ENST00000554803 THAP6Q8TBB0 222 aa9.78□□□□□ -0.84
SRP54-205ENST00000554803 GCDHQ92947 438 aaPredicted RBP9.78□□□□□ -0.84
SRP54-205ENST00000554803 ZBTB8AQ96BR9 441 aa9.78□□□□□ -0.84
SRP54-205ENST00000554803 MBD6Q96DN6 1003 aa9.78□□□□□ -0.84
SRP54-205ENST00000554803 LINC00052Q96N35 136 aa9.78□□□□□ -0.84
SRP54-205ENST00000554803 ABHD6Q9BV23 337 aa9.78□□□□□ -0.84
SRP54-205ENST00000554803 PTDSS2Q9BVG9 487 aa9.78□□□□□ -0.84
SRP54-205ENST00000554803 WWTR1Q9GZV5 400 aa9.78□□□□□ -0.84
SRP54-205ENST00000554803 GHRLQ9UBU3 117 aa9.78□□□□□ -0.84
SRP54-205ENST00000554803 OR52A1Q9UKL2 312 aa9.78□□□□□ -0.84
SRP54-205ENST00000554803 TMED7Q9Y3B3 224 aa9.78□□□□□ -0.84
SRP54-205ENST00000554803 LRP12Q9Y561 859 aa9.78□□□□□ -0.84
SRP54-205ENST00000554803 ARID1AO14497 2285 aa9.77□□□□□ -0.84
SRP54-205ENST00000554803 ANK2Q01484 3957 aa9.77□□□□□ -0.84
SRP54-205ENST00000554803 PCNX3Q9H6A9 2034 aa9.77□□□□□ -0.85
SRP54-205ENST00000554803 ZNF407Q9C0G0 2248 aa9.77□□□□□ -0.85
SRP54-205ENST00000554803 FAM171A2A8MVW0 826 aa9.77□□□□□ -0.85
SRP54-205ENST00000554803 TRIM77I1YAP6 450 aa9.77□□□□□ -0.85
SRP54-205ENST00000554803 PSMD9O00233 223 aa9.77□□□□□ -0.85
SRP54-205ENST00000554803 ETV2O00321 342 aaPredicted RBP9.77□□□□□ -0.85
SRP54-205ENST00000554803 TOR1AO14656 332 aa9.77□□□□□ -0.85
SRP54-205ENST00000554803 SLC16A7O60669 478 aa9.77□□□□□ -0.85
SRP54-205ENST00000554803 DUS4LO95620 317 aaKnown RBP9.77□□□□□ -0.85
SRP54-205ENST00000554803 ZNF735P0CB33 412 aa9.77□□□□□ -0.85
SRP54-205ENST00000554803 CNR1P21554 472 aa9.77□□□□□ -0.85
SRP54-205ENST00000554803 BDKRB2P30411 391 aa9.77□□□□□ -0.85
SRP54-205ENST00000554803 ECI1P42126 302 aa9.77□□□□□ -0.85
SRP54-205ENST00000554803 NR0B1P51843 470 aaKnown RBP9.77□□□□□ -0.85
SRP54-205ENST00000554803 SORDQ00796 357 aa9.77□□□□□ -0.85
SRP54-205ENST00000554803 FLI1Q01543 452 aaPredicted RBP9.77□□□□□ -0.85
SRP54-205ENST00000554803 MYBPHQ13203 477 aa9.77□□□□□ -0.85
SRP54-205ENST00000554803 DHRS2Q13268 280 aa9.77□□□□□ -0.85
SRP54-205ENST00000554803 PPA1Q15181 289 aa9.77□□□□□ -0.85
SRP54-205ENST00000554803 TUSC1Q2TAM9 212 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms