RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 DCAF16Q9NXF7 216 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 PLEK2Q9NYT0 353 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 ATPIF1Q9UII2 106 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 KLHL21Q9UJP4 597 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 PURGQ9UJV8 347 aaKnown RBP3.49□□□□□ -1.85
VTI1B-203ENST00000554636 PRPF19Q9UMS4 504 aaKnown RBP3.49□□□□□ -1.85
VTI1B-203ENST00000554636 B9D1Q9UPM9 204 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 WIPI2Q9Y4P8 454 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 LHFPL6Q9Y693 200 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 STAB1Q9NY15 2570 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 IGHV1-69-2A0A0G2JMI3 117 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 OR6C68A6NDL8 312 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 FAM90A18PA6NE21 464 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 FAM90A16PA6NEW6 464 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 FAM90A9PA6NNJ1 464 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 FAM90A5PA8MXJ8 464 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 CLDN25C9JDP6 229 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 PRR23D1E9PI22 279 aaPredicted RBP3.48□□□□□ -1.85
VTI1B-203ENST00000554636 ACOT8O14734 319 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 PHF1O43189 567 aaPredicted RBP3.48□□□□□ -1.85
VTI1B-203ENST00000554636 IDH3BO43837 385 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 TIMM8AO60220 97 aaPredicted RBP3.48□□□□□ -1.85
VTI1B-203ENST00000554636 KRT36O76013 467 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 CCNB2O95067 398 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 SOX14O95416 240 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 TGFAP01135 160 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 IGHV2-5P01817 119 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 MSMBP08118 114 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 ACSM4P0C7M7 580 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 FAM90A15PP0C7V4 464 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 FAM90A14PP0C7W9 464 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 PRR23D2P0DMB1 279 aaPredicted RBP3.48□□□□□ -1.85
VTI1B-203ENST00000554636 SRD5A1P18405 259 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 GSTM3P21266 225 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 CRABP1P29762 137 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 GCH1P30793 250 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 PYCR1P32322 319 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 RBMXP38159 391 aaKnown RBP3.48□□□□□ -1.85
VTI1B-203ENST00000554636 GUCA1AP43080 201 aaPredicted RBP3.48□□□□□ -1.85
VTI1B-203ENST00000554636 RFX2P48378 723 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 MNAT1P51948 309 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 ARHGDIAP52565 204 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 TMEM33P57088 247 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 CCL8P80075 99 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.48□□□□□ -1.85
VTI1B-203ENST00000554636 PPP1R8Q12972 351 aaKnown RBP3.48□□□□□ -1.85
VTI1B-203ENST00000554636 MOGQ16653 247 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 RSPO1Q2MKA7 263 aaPredicted RBP3.48□□□□□ -1.85
VTI1B-203ENST00000554636 KRTAP24-1Q3LI83 254 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 CLEC12AQ5QGZ9 265 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 LINC01590Q5TEZ4 76 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 OR2T5Q6IEZ7 315 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 CORO6Q6QEF8 472 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 UNQ6126/PRO20091Q6UXV3 157 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 RASSF6Q6ZTQ3 369 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.48□□□□□ -1.85
VTI1B-203ENST00000554636 LINC00346Q8IVM7 164 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 CADM3Q8N126 398 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 CYB561A3Q8NBI2 242 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 SLC37A3Q8NCC5 494 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 OR10G2Q8NGC3 310 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 OR52L1Q8NGH7 329 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 OR10S1Q8NGN2 331 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 OR2T29Q8NH02 315 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 OR51F2Q8NH61 342 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 ITLN1Q8WWA0 313 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 ZNRF4Q8WWF5 429 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 TMEM186Q96B77 213 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 CCDC124Q96CT7 223 aaKnown RBP3.48□□□□□ -1.85
VTI1B-203ENST00000554636 CMBLQ96DG6 245 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 ASB9Q96DX5 294 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 ELMOD3Q96FG2 381 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 IFT27Q9BW83 186 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 C1QTNF5Q9BXJ0 243 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 BEX2Q9BXY8 128 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 DGCR6LQ9BY27 220 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 KRTAP2-2Q9BYT5 123 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 SHARPINQ9H0F6 387 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 HDHD2Q9H0R4 259 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 C1orf21Q9H246 121 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 RERGLQ9H628 205 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 RPRD1BQ9NQG5 326 aaKnown RBP3.48□□□□□ -1.85
VTI1B-203ENST00000554636 G6PC2Q9NQR9 355 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 CYSLTR2Q9NS75 346 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 TMEM106BQ9NUM4 274 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 ARMC1Q9NVT9 282 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 HIF1ANQ9NWT6 349 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 TAS2R1Q9NYW7 299 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 IL20Q9NYY1 176 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 TREM2Q9NZC2 230 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 PTTG3PQ9NZH4 202 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 CYB5R1Q9UHQ9 305 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 TMCC3Q9ULS5 477 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 POLR1DQ9Y2S0 133 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 STARD10Q9Y365 291 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 GRIP1Q9Y3R0 1128 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 SAMHD1Q9Y3Z3 626 aaKnown RBP3.48□□□□□ -1.85
VTI1B-203ENST00000554636 MXRA5Q9NR99 2828 aa3.48□□□□□ -1.85
VTI1B-203ENST00000554636 DOCK11Q5JSL3 2073 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 A0A1B0GWJ7 208 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms