RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 MAGIXQ9H6Y5 334 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 SIAEQ9HAT2 523 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 ELOVL3Q9HB03 270 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 TUBG2Q9NRH3 451 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 THUMPD1Q9NXG2 353 aaKnown RBP3.98□□□□□ -1.77
ATXN3-228ENST00000554592 SELENONQ9NZV5 590 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 CLN8Q9UBY8 286 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 USH1CQ9Y6N9 552 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 WNK2Q9Y3S1 2297 aa3.97□□□□□ -1.77
ATXN3-228ENST00000554592 LOC100509620A0A075B734 347 aa3.97□□□□□ -1.77
ATXN3-228ENST00000554592 IGHV1-69DA0A0B4J2H0 117 aa3.97□□□□□ -1.77
ATXN3-228ENST00000554592 A0A1B0GWA3 101 aa3.97□□□□□ -1.77
ATXN3-228ENST00000554592 BTBD17A6NE02 478 aa3.97□□□□□ -1.77
ATXN3-228ENST00000554592 SMIM23A6NLE4 172 aa3.97□□□□□ -1.77
ATXN3-228ENST00000554592 LRRC30A6NM36 301 aa3.97□□□□□ -1.77
ATXN3-228ENST00000554592 RNASEK-C17orf49H0YIS7 233 aa3.97□□□□□ -1.77
ATXN3-228ENST00000554592 PHYHO14832 338 aa3.97□□□□□ -1.77
ATXN3-228ENST00000554592 ENSAO43768 121 aaKnown RBP3.97□□□□□ -1.77
ATXN3-228ENST00000554592 MT-ATP6P00846 226 aa3.97□□□□□ -1.77
ATXN3-228ENST00000554592 IGHV1-69P01742 117 aa3.97□□□□□ -1.77
ATXN3-228ENST00000554592 IGHG1P01857 330 aa3.97□□□□□ -1.77
ATXN3-228ENST00000554592 ADORA3P0DMS8 318 aa3.97□□□□□ -1.77
ATXN3-228ENST00000554592 THRBP10828 461 aa3.97□□□□□ -1.77
ATXN3-228ENST00000554592 GSTM3P21266 225 aa3.97□□□□□ -1.77
ATXN3-228ENST00000554592 BDKRB2P30411 391 aa3.97□□□□□ -1.77
ATXN3-228ENST00000554592 ALDH3A1P30838 453 aa3.97□□□□□ -1.77
ATXN3-228ENST00000554592 GABRA5P31644 462 aa3.97□□□□□ -1.77
ATXN3-228ENST00000554592 CFHR2P36980 270 aa3.97□□□□□ -1.77
ATXN3-228ENST00000554592 CRATP43155 626 aa3.97□□□□□ -1.77
ATXN3-228ENST00000554592 KIR2DS4P43632 304 aa3.97□□□□□ -1.77
ATXN3-228ENST00000554592 PITPNBP48739 271 aa3.97□□□□□ -1.77
ATXN3-228ENST00000554592 NPY4RP50391 375 aa3.97□□□□□ -1.77
ATXN3-228ENST00000554592 SLC18A1P54219 525 aa3.97□□□□□ -1.77
ATXN3-228ENST00000554592 NANOS2P60321 138 aaKnown RBP3.97□□□□□ -1.77
ATXN3-228ENST00000554592 RIPK1Q13546 671 aa3.97□□□□□ -1.77
ATXN3-228ENST00000554592 TNFAIP8L3Q5GJ75 292 aa3.97□□□□□ -1.77
ATXN3-228ENST00000554592 SPANXN4Q5MJ08 99 aa3.97□□□□□ -1.77
ATXN3-228ENST00000554592 WDR25Q64LD2 544 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-228ENST00000554592 C8orf82Q6P1X6 216 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-228ENST00000554592 KCTD18Q6PI47 426 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-228ENST00000554592 CCBE1Q6UXH8 406 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-228ENST00000554592 LRRC18Q8N456 261 aa3.97□□□□□ -1.77
ATXN3-228ENST00000554592 SPERTQ8NA61 448 aa3.97□□□□□ -1.77
ATXN3-228ENST00000554592 OR4S1Q8NGB4 309 aa3.97□□□□□ -1.77
ATXN3-228ENST00000554592 OR5J2Q8NH18 312 aa3.97□□□□□ -1.77
ATXN3-228ENST00000554592 AGR3Q8TD06 166 aa3.97□□□□□ -1.77
ATXN3-228ENST00000554592 ITLN1Q8WWA0 313 aa3.97□□□□□ -1.77
ATXN3-228ENST00000554592 PTP4A1Q93096 173 aa3.97□□□□□ -1.77
ATXN3-228ENST00000554592 MCHR2Q969V1 340 aa3.97□□□□□ -1.77
ATXN3-228ENST00000554592 C4orf45Q96LM5 186 aa3.97□□□□□ -1.77
ATXN3-228ENST00000554592 OR2V2Q96R30 315 aa3.97□□□□□ -1.77
ATXN3-228ENST00000554592 TBX15Q96SF7 602 aa3.97□□□□□ -1.77
ATXN3-228ENST00000554592 ZNF607Q96SK3 696 aa3.97□□□□□ -1.77
ATXN3-228ENST00000554592 FN3KRPQ9HA64 309 aa3.97□□□□□ -1.77
ATXN3-228ENST00000554592 TMEM27Q9HBJ8 222 aa3.97□□□□□ -1.77
ATXN3-228ENST00000554592 BCL2L10Q9HD36 194 aa3.97□□□□□ -1.77
ATXN3-228ENST00000554592 CCNB1IP1Q9NPC3 277 aa3.97□□□□□ -1.77
ATXN3-228ENST00000554592 P2RX2Q9UBL9 471 aa3.97□□□□□ -1.77
ATXN3-228ENST00000554592 CAB39Q9Y376 341 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-228ENST00000554592 TIMM10BQ9Y5J6 103 aa3.97□□□□□ -1.77
ATXN3-228ENST00000554592 A0A0U1RQK1 487 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 ANKRD61A6NGH8 418 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 CENPBD1B2RD01 187 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 LRRN3E7EW58 273 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 E9PBE3 544 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 C11orf98E9PRG8 122 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 C3orf84H3BNL1 204 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 K7EIL1 84 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 SPINT2O43291 252 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 RNF13O43567 381 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 ATP5HO75947 161 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 PPP1R3DO95685 299 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 CYB5R3P00387 301 aaPredicted RBP3.96□□□□□ -1.78
ATXN3-228ENST00000554592 ALPLP05186 524 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 BCHEP06276 602 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 PGA4P0DJD7 388 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 PGA3P0DJD8 388 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 ZNF32P17041 273 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 KITLGP21583 273 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 HTR2AP28223 471 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 CDKN2CP42773 168 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 SRP9P49458 86 aaKnown RBP3.96□□□□□ -1.78
ATXN3-228ENST00000554592 THBS3P49746 956 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 MNAT1P51948 309 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 ZNF133P52736 654 aaPredicted RBP3.96□□□□□ -1.78
ATXN3-228ENST00000554592 SEC61BP60468 96 aaKnown RBP3.96□□□□□ -1.78
ATXN3-228ENST00000554592 DSTNP60981 165 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 MAGOHP61326 146 aaKnown RBP3.96□□□□□ -1.78
ATXN3-228ENST00000554592 PSG4Q00888 419 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 COX10Q12887 443 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 OR1Q1Q15612 314 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 CTF1Q16619 201 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 HIST3H3Q16695 136 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 ZNF181Q2M3W8 571 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 ZNF404Q494X3 552 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 IGSF11Q5DX21 431 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 FAM27BQ5VT28 67 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 METTL11BQ5VVY1 283 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 WDR73Q6P4I2 378 aa3.96□□□□□ -1.78
ATXN3-228ENST00000554592 ZNF841Q6ZN19 808 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms