RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 DYRK2Q92630 601 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 TIMD4Q96H15 378 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 WDFY2Q96P53 400 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 TSSK2Q96PF2 358 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 SLC30A2Q9BRI3 323 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 PCDHAC1Q9H158 963 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 TMEM38AQ9H6F2 299 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 ZNF702PQ9H963 129 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 TMEM27Q9HBJ8 222 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 KCNK9Q9NPC2 374 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 NOX4Q9NPH5 578 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 B3GAT2Q9NPZ5 323 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 NANSQ9NR45 359 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 SIRT7Q9NRC8 400 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 UFSP2Q9NUQ7 469 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 ACOXLQ9NUZ1 547 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 OR5V1Q9UGF6 321 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 ZNF229Q9UJW7 825 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 A4GNTQ9UNA3 340 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 PPP1R3CQ9UQK1 317 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 LRCH1Q9Y2L9 728 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 UBE2J1Q9Y385 318 aaPredicted RBP2.53□□□□□ -2
SLIRP-202ENST00000553981 ADAM18Q9Y3Q7 739 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 DNAH10Q8IVF4 4471 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 DYNC1H1Q14204 4646 aaKnown RBP2.52□□□□□ -2.01
SLIRP-202ENST00000553981 PLSCR5A0PG75 271 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 FXYD1O00168 92 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 P2RY10O00398 339 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 BIRC5O15392 142 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 DOK2O60496 412 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 FMO6PO60774 539 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 ANP32DO95626 131 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 PTBP3O95758 552 aaKnown RBP2.52□□□□□ -2.01
SLIRP-202ENST00000553981 IGHG1P01857 330 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 MT-ND1P03886 318 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 IL6P05231 212 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 UQCRBP14927 111 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 RPL4P36578 427 aaKnown RBP2.52□□□□□ -2.01
SLIRP-202ENST00000553981 CD200P41217 278 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 YAP1P46937 504 aaKnown RBP2.52□□□□□ -2.01
SLIRP-202ENST00000553981 HTR5AP47898 357 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 GDI2P50395 445 aaKnown RBP2.52□□□□□ -2.01
SLIRP-202ENST00000553981 RAB13P51153 203 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 SLC18A1P54219 525 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 RPL27P61353 136 aaKnown RBP2.52□□□□□ -2.01
SLIRP-202ENST00000553981 CSNK2BP67870 215 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 HIST1H3AP68431 136 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 LRRC74AQ0VAA2 488 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 FADDQ13158 208 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 SCGB2A2Q13296 93 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 GNA13Q14344 377 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 GK2Q14410 553 aaPredicted RBP2.52□□□□□ -2.01
SLIRP-202ENST00000553981 HERPUD1Q15011 391 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 TAF11Q15544 211 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 ZNF181Q2M3W8 571 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 NSUN5P1Q3KNT7 163 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 KLHL12Q53G59 568 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 ALG10Q5BKT4 473 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 CEP85LQ5SZL2 805 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 UTF1Q5T230 341 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 HIST2H3PS2Q5TEC6 136 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 REEP3Q6NUK4 255 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 C8orf82Q6P1X6 216 aaPredicted RBP2.52□□□□□ -2.01
SLIRP-202ENST00000553981 WDR93Q6P2C0 686 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 ZNF613Q6PF04 617 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 TTC33Q6PID6 262 aaPredicted RBP2.52□□□□□ -2.01
SLIRP-202ENST00000553981 ARL9Q6T311 187 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 EPGNQ6UW88 154 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 C5orf46Q6UWT4 87 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 FBXW12Q6X9E4 464 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 CFAP77Q6ZQR2 320 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 HIST2H3AQ71DI3 136 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 LHFPL4Q7Z7J7 247 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 CALHM3Q86XJ0 350 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 SLC30A8Q8IWU4 369 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 TEX29Q8N6K0 151 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 KLHDC1Q8N7A1 406 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 TRIML2Q8N7C3 387 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 FAM216BQ8N7L0 139 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 ANKRD42Q8N9B4 389 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 ATG16L2Q8NAA4 619 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 WFDC9Q8NEX5 89 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 OR8B3Q8NGG8 313 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 OR1J2Q8NGS2 313 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 OR13C2Q8NGS9 318 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 OR2AE1Q8NHA4 323 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 PTP4A1Q93096 173 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 RASD2Q96D21 266 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 RBMXL1Q96E39 390 aaKnown RBP2.52□□□□□ -2.01
SLIRP-202ENST00000553981 THOC1Q96FV9 657 aaKnown RBP2.52□□□□□ -2.01
SLIRP-202ENST00000553981 ITCHQ96J02 903 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 FAM71F1Q96KD3 344 aaPredicted RBP2.52□□□□□ -2.01
SLIRP-202ENST00000553981 Q96M85 177 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 OR8B2Q96RD0 313 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 DDOQ99489 341 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 CCL13Q99616 98 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 CITED2Q99967 270 aaPredicted RBP2.52□□□□□ -2.01
SLIRP-202ENST00000553981 ECSITQ9BQ95 431 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 TMEM109Q9BVC6 243 aa2.52□□□□□ -2.01
SLIRP-202ENST00000553981 PPA2Q9H2U2 334 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms