RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 SEMA6DQ8NFY4 1073 aa12.44□□□□□ -0.42
SHMT2-208ENST00000553868 OR14K1Q8NGZ2 314 aa12.44□□□□□ -0.42
SHMT2-208ENST00000553868 ACOT12Q8WYK0 555 aa12.44□□□□□ -0.42
SHMT2-208ENST00000553868 PP6455Q8WZ26 134 aa12.44□□□□□ -0.42
SHMT2-208ENST00000553868 SPSB4Q96A44 273 aa12.44□□□□□ -0.42
SHMT2-208ENST00000553868 KCTD12Q96CX2 325 aaKnown RBP12.44□□□□□ -0.42
SHMT2-208ENST00000553868 UBTD1Q9HAC8 227 aa12.44□□□□□ -0.42
SHMT2-208ENST00000553868 V9GYS6 101 aa12.44□□□□□ -0.42
SHMT2-208ENST00000553868 ANKRD61A6NGH8 418 aa12.43□□□□□ -0.42
SHMT2-208ENST00000553868 RNF223E7ERA6 249 aa12.43□□□□□ -0.42
SHMT2-208ENST00000553868 CCL2P13500 99 aa12.43□□□□□ -0.42
SHMT2-208ENST00000553868 S100A5P33763 92 aa12.43□□□□□ -0.42
SHMT2-208ENST00000553868 MAGEB1P43366 347 aa12.43□□□□□ -0.42
SHMT2-208ENST00000553868 PTH2RP49190 550 aa12.43□□□□□ -0.42
SHMT2-208ENST00000553868 RIPPLY1Q0D2K3 151 aa12.43□□□□□ -0.42
SHMT2-208ENST00000553868 DYNC1I2Q13409 638 aaKnown RBP12.43□□□□□ -0.42
SHMT2-208ENST00000553868 LSAMPQ13449 338 aa12.43□□□□□ -0.42
SHMT2-208ENST00000553868 CHRFAM7AQ494W8 412 aa12.43□□□□□ -0.42
SHMT2-208ENST00000553868 ZBTB37Q5TC79 503 aa12.43□□□□□ -0.42
SHMT2-208ENST00000553868 GLT8D1Q68CQ7 371 aa12.43□□□□□ -0.42
SHMT2-208ENST00000553868 NKAIN3Q8N8D7 197 aa12.43□□□□□ -0.42
SHMT2-208ENST00000553868 LYZL4Q96KX0 146 aa12.43□□□□□ -0.42
SHMT2-208ENST00000553868 MRI1Q9BV20 369 aa12.43□□□□□ -0.42
SHMT2-208ENST00000553868 NXF2Q9GZY0 626 aaKnown RBP12.43□□□□□ -0.42
SHMT2-208ENST00000553868 ZCCHC4Q9H5U6 513 aa12.43□□□□□ -0.42
SHMT2-208ENST00000553868 NGBQ9NPG2 151 aa12.43□□□□□ -0.42
SHMT2-208ENST00000553868 TAS2R4Q9NYW5 299 aa12.43□□□□□ -0.42
SHMT2-208ENST00000553868 SPEF1Q9Y4P9 236 aa12.43□□□□□ -0.42
SHMT2-208ENST00000553868 PEX16Q9Y5Y5 336 aa12.43□□□□□ -0.42
SHMT2-208ENST00000553868 V9GY05 133 aa12.43□□□□□ -0.42
SHMT2-208ENST00000553868 PKD1L1Q8TDX9 2849 aa12.43□□□□□ -0.42
SHMT2-208ENST00000553868 hCG_38984A0A1B0GV85 526 aa12.42□□□□□ -0.42
SHMT2-208ENST00000553868 SHISA3A0PJX4 238 aa12.42□□□□□ -0.42
SHMT2-208ENST00000553868 MAGEB3O15480 346 aa12.42□□□□□ -0.42
SHMT2-208ENST00000553868 CELA3BP08861 270 aa12.42□□□□□ -0.42
SHMT2-208ENST00000553868 CECR9P0C854 216 aa12.42□□□□□ -0.42
SHMT2-208ENST00000553868 OCMP0CE72 109 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-208ENST00000553868 IGFBP3P17936 291 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-208ENST00000553868 RAB3AP20336 220 aa12.42□□□□□ -0.42
SHMT2-208ENST00000553868 DDOSTP39656 456 aa12.42□□□□□ -0.42
SHMT2-208ENST00000553868 RAD52P43351 418 aa12.42□□□□□ -0.42
SHMT2-208ENST00000553868 GSK3AP49840 483 aa12.42□□□□□ -0.42
SHMT2-208ENST00000553868 ZNF92Q03936 586 aa12.42□□□□□ -0.42
SHMT2-208ENST00000553868 TAB1Q15750 504 aa12.42□□□□□ -0.42
SHMT2-208ENST00000553868 CEP78Q5JTW2 689 aa12.42□□□□□ -0.42
SHMT2-208ENST00000553868 SFXN4Q6P4A7 337 aa12.42□□□□□ -0.42
SHMT2-208ENST00000553868 LRRTM1Q86UE6 522 aa12.42□□□□□ -0.42
SHMT2-208ENST00000553868 FTMTQ8N4E7 242 aa12.42□□□□□ -0.42
SHMT2-208ENST00000553868 OR2AE1Q8NHA4 323 aa12.42□□□□□ -0.42
SHMT2-208ENST00000553868 FOXRED1Q96CU9 486 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-208ENST00000553868 C1QTNF6Q9BXI9 259 aa12.42□□□□□ -0.42
SHMT2-208ENST00000553868 BARHL1Q9BZE3 327 aa12.42□□□□□ -0.42
SHMT2-208ENST00000553868 BCL2L14Q9BZR8 327 aa12.42□□□□□ -0.42
SHMT2-208ENST00000553868 C6orf62Q9GZU0 229 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-208ENST00000553868 TMEM138Q9NPI0 162 aa12.42□□□□□ -0.42
SHMT2-208ENST00000553868 PIGLQ9Y2B2 252 aa12.42□□□□□ -0.42
SHMT2-208ENST00000553868 AK6Q9Y3D8 172 aaKnown RBP12.42□□□□□ -0.42
SHMT2-208ENST00000553868 TRAV8-7A0A075B6U6 113 aa12.41□□□□□ -0.42
SHMT2-208ENST00000553868 IGHV1-18A0A0C4DH31 117 aa12.41□□□□□ -0.42
SHMT2-208ENST00000553868 C5orf63A6NC05 138 aa12.41□□□□□ -0.42
SHMT2-208ENST00000553868 M0R1B8 84 aa12.41□□□□□ -0.42
SHMT2-208ENST00000553868 SIAH2O43255 324 aa12.41□□□□□ -0.42
SHMT2-208ENST00000553868 SULT1B1O43704 296 aa12.41□□□□□ -0.42
SHMT2-208ENST00000553868 ALX3O95076 343 aa12.41□□□□□ -0.42
SHMT2-208ENST00000553868 GOSR1O95249 250 aa12.41□□□□□ -0.42
SHMT2-208ENST00000553868 CRYAAP02489 173 aa12.41□□□□□ -0.42
SHMT2-208ENST00000553868 MAS1P04201 325 aa12.41□□□□□ -0.42
SHMT2-208ENST00000553868 BDKRB2P30411 391 aa12.41□□□□□ -0.42
SHMT2-208ENST00000553868 WNT5AP41221 380 aa12.41□□□□□ -0.42
SHMT2-208ENST00000553868 ZNF83P51522 516 aa12.41□□□□□ -0.42
SHMT2-208ENST00000553868 FAM3AP98173 230 aa12.41□□□□□ -0.42
SHMT2-208ENST00000553868 OR8B8Q15620 311 aa12.41□□□□□ -0.42
SHMT2-208ENST00000553868 IDNKQ5T6J7 187 aa12.41□□□□□ -0.42
SHMT2-208ENST00000553868 UTS2BQ765I0 119 aa12.41□□□□□ -0.42
SHMT2-208ENST00000553868 CSNK2A3Q8NEV1 391 aa12.41□□□□□ -0.42
SHMT2-208ENST00000553868 OR1M1Q8NGA1 313 aa12.41□□□□□ -0.42
SHMT2-208ENST00000553868 ADAT3Q96EY9 351 aaPredicted RBP12.41□□□□□ -0.42
SHMT2-208ENST00000553868 CPNE2Q96FN4 548 aaPredicted RBP12.41□□□□□ -0.42
SHMT2-208ENST00000553868 TECTBQ96PL2 329 aa12.41□□□□□ -0.42
SHMT2-208ENST00000553868 GSX2Q9BZM3 304 aa12.41□□□□□ -0.42
SHMT2-208ENST00000553868 SMURF1Q9HCE7 757 aa12.41□□□□□ -0.42
SHMT2-208ENST00000553868 PTTG3PQ9NZH4 202 aa12.41□□□□□ -0.42
SHMT2-208ENST00000553868 ABRACLQ9P1F3 81 aa12.41□□□□□ -0.42
SHMT2-208ENST00000553868 ADAM30Q9UKF2 790 aa12.41□□□□□ -0.42
SHMT2-208ENST00000553868 STARD10Q9Y365 291 aa12.41□□□□□ -0.42
SHMT2-208ENST00000553868 ZNF816-ZNF321PA0A0X1KG74 233 aa12.4□□□□□ -0.42
SHMT2-208ENST00000553868 SMIM30A4D0T7 59 aa12.4□□□□□ -0.42
SHMT2-208ENST00000553868 GGT3PA6NGU5 568 aa12.4□□□□□ -0.42
SHMT2-208ENST00000553868 IFITM5A6NNB3 132 aa12.4□□□□□ -0.42
SHMT2-208ENST00000553868 AIPO00170 330 aa12.4□□□□□ -0.42
SHMT2-208ENST00000553868 LMX1BO60663 402 aa12.4□□□□□ -0.42
SHMT2-208ENST00000553868 NCR1O76036 304 aa12.4□□□□□ -0.42
SHMT2-208ENST00000553868 FAM157CP0CG43 387 aa12.4□□□□□ -0.42
SHMT2-208ENST00000553868 ZNF35P13682 527 aa12.4□□□□□ -0.42
SHMT2-208ENST00000553868 SELEP16581 610 aa12.4□□□□□ -0.42
SHMT2-208ENST00000553868 CCKARP32238 428 aa12.4□□□□□ -0.42
SHMT2-208ENST00000553868 CAPZA1P52907 286 aa12.4□□□□□ -0.42
SHMT2-208ENST00000553868 UCP2P55851 309 aa12.4□□□□□ -0.42
SHMT2-208ENST00000553868 CAV3P56539 151 aa12.4□□□□□ -0.42
SHMT2-208ENST00000553868 OR10A3P58181 314 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms