RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 A0A0J9YYE9 177 aa2.14□□□□□ -2.07
SCFD1-210ENST00000553693 ZNF816-ZNF321PA0A0X1KG74 233 aa2.14□□□□□ -2.07
SCFD1-210ENST00000553693 A0A1W2PPV4 95 aa2.14□□□□□ -2.07
SCFD1-210ENST00000553693 I3L4J1 428 aa2.14□□□□□ -2.07
SCFD1-210ENST00000553693 NVLO15381 856 aaKnown RBP2.14□□□□□ -2.07
SCFD1-210ENST00000553693 SLC31A2O15432 143 aa2.14□□□□□ -2.07
SCFD1-210ENST00000553693 XRCC2O43543 280 aa2.14□□□□□ -2.07
SCFD1-210ENST00000553693 RDH16O75452 317 aa2.14□□□□□ -2.07
SCFD1-210ENST00000553693 TRBC1P01850 177 aa2.14□□□□□ -2.07
SCFD1-210ENST00000553693 IFNW1P05000 195 aa2.14□□□□□ -2.07
SCFD1-210ENST00000553693 CD5P06127 495 aa2.14□□□□□ -2.07
SCFD1-210ENST00000553693 PNMA6AP0CW24 399 aaPredicted RBP2.14□□□□□ -2.07
SCFD1-210ENST00000553693 PMCHP20382 165 aa2.14□□□□□ -2.07
SCFD1-210ENST00000553693 CD82P27701 267 aa2.14□□□□□ -2.07
SCFD1-210ENST00000553693 GPR1P46091 355 aa2.14□□□□□ -2.07
SCFD1-210ENST00000553693 CCR8P51685 355 aa2.14□□□□□ -2.07
SCFD1-210ENST00000553693 NUTF2P61970 127 aaKnown RBP2.14□□□□□ -2.07
SCFD1-210ENST00000553693 ILKQ13418 452 aa2.14□□□□□ -2.07
SCFD1-210ENST00000553693 PGGHGQ32M88 737 aa2.14□□□□□ -2.07
SCFD1-210ENST00000553693 HNRNPA1L2Q32P51 320 aaKnown RBP2.14□□□□□ -2.07
SCFD1-210ENST00000553693 RFX4Q33E94 735 aa2.14□□□□□ -2.07
SCFD1-210ENST00000553693 FBXO48Q5FWF7 155 aa2.14□□□□□ -2.07
SCFD1-210ENST00000553693 LY6G6FQ5SQ64 297 aa2.14□□□□□ -2.07
SCFD1-210ENST00000553693 UBE2UQ5VVX9 321 aa2.14□□□□□ -2.07
SCFD1-210ENST00000553693 THOC7Q6I9Y2 204 aaKnown RBP2.14□□□□□ -2.07
SCFD1-210ENST00000553693 C1orf94Q6P1W5 598 aa2.14□□□□□ -2.07
SCFD1-210ENST00000553693 CD300LGQ6UXG3 332 aa2.14□□□□□ -2.07
SCFD1-210ENST00000553693 RALGPS2Q86X27 583 aaPredicted RBP2.14□□□□□ -2.07
SCFD1-210ENST00000553693 CBR4Q8N4T8 237 aa2.14□□□□□ -2.07
SCFD1-210ENST00000553693 PQLC3Q8N755 202 aa2.14□□□□□ -2.07
SCFD1-210ENST00000553693 FBXL13Q8NEE6 735 aa2.14□□□□□ -2.07
SCFD1-210ENST00000553693 OR10G9Q8NGN4 311 aa2.14□□□□□ -2.07
SCFD1-210ENST00000553693 OR8K3Q8NH51 312 aa2.14□□□□□ -2.07
SCFD1-210ENST00000553693 LRRC20Q8TCA0 184 aa2.14□□□□□ -2.07
SCFD1-210ENST00000553693 MCOLN3Q8TDD5 553 aa2.14□□□□□ -2.07
SCFD1-210ENST00000553693 DEDD2Q8WXF8 326 aa2.14□□□□□ -2.07
SCFD1-210ENST00000553693 FAM131CQ96AQ9 280 aa2.14□□□□□ -2.07
SCFD1-210ENST00000553693 APH1AQ96BI3 265 aa2.14□□□□□ -2.07
SCFD1-210ENST00000553693 CPB2Q96IY4 423 aa2.14□□□□□ -2.07
SCFD1-210ENST00000553693 FCRL1Q96LA6 429 aa2.14□□□□□ -2.07
SCFD1-210ENST00000553693 OPALINQ96PE5 141 aa2.14□□□□□ -2.07
SCFD1-210ENST00000553693 CSPG4P5Q96PW8 444 aa2.14□□□□□ -2.07
SCFD1-210ENST00000553693 RASL11BQ9BPW5 248 aa2.14□□□□□ -2.07
SCFD1-210ENST00000553693 NRIP2Q9BQI9 281 aa2.14□□□□□ -2.07
SCFD1-210ENST00000553693 SLC7A5P2Q9GIP4 190 aa2.14□□□□□ -2.07
SCFD1-210ENST00000553693 C20orf85Q9H1P6 137 aa2.14□□□□□ -2.07
SCFD1-210ENST00000553693 PRORYQ9H606 182 aa2.14□□□□□ -2.07
SCFD1-210ENST00000553693 RPF2Q9H7B2 306 aaKnown RBP2.14□□□□□ -2.07
SCFD1-210ENST00000553693 MRM3Q9HC36 420 aaKnown RBP2.14□□□□□ -2.07
SCFD1-210ENST00000553693 RETNQ9HD89 108 aa2.14□□□□□ -2.07
SCFD1-210ENST00000553693 PCYOX1Q9UHG3 505 aa2.14□□□□□ -2.07
SCFD1-210ENST00000553693 SLC17A4Q9Y2C5 497 aa2.14□□□□□ -2.07
SCFD1-210ENST00000553693 ATMQ13315 3056 aa2.14□□□□□ -2.07
SCFD1-210ENST00000553693 F5P12259 2224 aa2.14□□□□□ -2.07
SCFD1-210ENST00000553693 EML5Q05BV3 1969 aa2.14□□□□□ -2.07
SCFD1-210ENST00000553693 USP9XQ93008 2570 aaPredicted RBP2.13□□□□□ -2.07
SCFD1-210ENST00000553693 PLXNB3Q9ULL4 1909 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 ASXL3Q9C0F0 2248 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 TRAV39A0A0B4J263 110 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 IGHV3-64DA0A0J9YX35 117 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 BOLA2-SMG1P6H3BVE0 249 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 PLPP1O14494 284 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 B4GALT5O43286 388 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 CHST1O43916 411 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 FAM189A1O60320 539 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 EIF4E2O60573 245 aaKnown RBP2.13□□□□□ -2.07
SCFD1-210ENST00000553693 TSPAN13O95857 204 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 TGM6O95932 706 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 IGKV1-17P01599 117 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 HBE1P02100 147 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 APOA1P02647 267 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 ARG1P05089 322 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 CLTAP09496 248 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 CT62P0C5K7 136 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 ZNF250P15622 560 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 WARSP23381 471 aaKnown RBP2.13□□□□□ -2.07
SCFD1-210ENST00000553693 GABRR2P28476 465 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 NPBWR2P48146 333 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 ARPP19P56211 112 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 LAMTOR4Q0VGL1 99 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 ART3Q13508 389 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 AQP6Q13520 282 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 DMC1Q14565 340 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 NKAIN1Q4KMZ8 207 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 TPTE2P1Q5T6R2 138 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 GPR107Q5VW38 600 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 ADNP2Q6IQ32 1131 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 LCN12Q6JVE5 192 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 H3F3CQ6NXT2 135 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 IGFL1Q6UW32 110 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 ABHD13Q7L211 337 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 ABHD12BQ7Z5M8 362 aaPredicted RBP2.13□□□□□ -2.07
SCFD1-210ENST00000553693 THOC6Q86W42 341 aaKnown RBP2.13□□□□□ -2.07
SCFD1-210ENST00000553693 PIANPQ8IYJ0 282 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 PRSS58Q8IYP2 241 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 FAM58AQ8N1B3 248 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 C6orf223Q8N319 242 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 DEFB119Q8N690 84 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 PRELID2Q8N945 189 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 SNX31Q8N9S9 440 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms