RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 ACOX3O15254 700 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 NUPL2O15504 423 aaKnown RBP1.61□□□□□ -2.15
VRK1-202ENST00000553683 FCMRO60667 390 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 EIF1BO60739 113 aaKnown RBP1.61□□□□□ -2.15
VRK1-202ENST00000553683 DPM1O60762 260 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 SNAP29O95721 258 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 LDOC1O95751 146 aaPredicted RBP1.61□□□□□ -2.15
VRK1-202ENST00000553683 MBP02144 154 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 CALB1P05937 261 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 C2P06681 752 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 CRYGBP07316 175 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 NBEAP1P0C6P0 100 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 CD36P16671 472 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 ZNF7P17097 686 aaPredicted RBP1.61□□□□□ -2.15
VRK1-202ENST00000553683 TCN2P20062 427 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 MX1P20591 662 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 TEAD1P28347 426 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 CD1CP29017 333 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 IL12BP29460 328 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 CASP14P31944 242 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 MAS1LP35410 378 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 TGFBR2P37173 567 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 EIF1P41567 113 aaKnown RBP1.61□□□□□ -2.15
VRK1-202ENST00000553683 TMED10P49755 219 aaKnown RBP1.61□□□□□ -2.15
VRK1-202ENST00000553683 BCAP31P51572 246 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 NCBP2P52298 156 aaKnown RBP eCLIP1.61□□□□□ -2.15
VRK1-202ENST00000553683 AP2S1P53680 142 aaPredicted RBP1.61□□□□□ -2.15
VRK1-202ENST00000553683 TAS2R60P59551 318 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 MRPS25P82663 173 aaKnown RBP1.61□□□□□ -2.15
VRK1-202ENST00000553683 REEP5Q00765 189 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 FLI1Q01543 452 aaPredicted RBP1.61□□□□□ -2.15
VRK1-202ENST00000553683 SYCNQ0VAF6 134 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 GINS1Q14691 196 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 POU2AF1Q16633 256 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 EXOC3L4Q17RC7 722 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 DEFB115Q30KQ5 88 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 VAX1Q5SQQ9 334 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 PRAMEF5Q5TYX0 476 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 PRAMEF6Q5VXH4 476 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 APOBEC3HQ6NTF7 200 aaKnown RBP1.61□□□□□ -2.15
VRK1-202ENST00000553683 CLEC18BQ6UXF7 455 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 LINC00173Q6ZV60 143 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 NIPA1Q7RTP0 329 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 PID1Q7Z2X4 250 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 HDDC2Q7Z4H3 204 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 DEFB132Q7Z7B7 95 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 CALHM3Q86XJ0 350 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 RBM45Q8IUH3 476 aaKnown RBP1.61□□□□□ -2.15
VRK1-202ENST00000553683 MMAAQ8IVH4 418 aaKnown RBP1.61□□□□□ -2.15
VRK1-202ENST00000553683 BBS7Q8IWZ6 715 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 GTPBP8Q8N3Z3 284 aaPredicted RBP1.61□□□□□ -2.15
VRK1-202ENST00000553683 NECAB1Q8N987 351 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 OR2D3Q8NGH3 330 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 OR13C9Q8NGT0 318 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 OR52P1PQ8NH57 321 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 LRRC20Q8TCA0 184 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 SDR42E1Q8WUS8 393 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 KCTD4Q8WVF5 259 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 ELMO1Q92556 727 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 NRGNQ92686 78 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 TMBIM1Q969X1 311 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 CPNE4Q96A23 557 aaPredicted RBP1.61□□□□□ -2.15
VRK1-202ENST00000553683 ECHDC3Q96DC8 303 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 NARS2Q96I59 477 aaKnown RBP1.61□□□□□ -2.15
VRK1-202ENST00000553683 MBOAT7Q96N66 472 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 PRAP1Q96NZ9 151 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 SLC38A2Q96QD8 506 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 HINT2Q9BX68 163 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 IL22Q9GZX6 179 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 METTL9Q9H1A3 318 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 GOLPH3Q9H4A6 298 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 SAV1Q9H4B6 383 aaPredicted RBP1.61□□□□□ -2.15
VRK1-202ENST00000553683 ASB7Q9H672 318 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 C11orf49Q9H6J7 331 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 ANKRA2Q9H9E1 313 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 COA4Q9NYJ1 87 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 MTCH1Q9NZJ7 389 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 GCNT4Q9P109 453 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 UVRAGQ9P2Y5 699 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 SMPXQ9UHP9 88 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 PSMD13Q9UNM6 376 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 TBL2Q9Y4P3 447 aaKnown RBP1.61□□□□□ -2.15
VRK1-202ENST00000553683 SZT2Q5T011 3432 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 MED14O60244 1454 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 IFT140Q96RY7 1462 aa1.61□□□□□ -2.15
VRK1-202ENST00000553683 GPATCH8Q9UKJ3 1502 aaKnown RBP1.61□□□□□ -2.15
VRK1-202ENST00000553683 RAB3GAP2Q9H2M9 1393 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 PRDM2Q13029 1718 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 ADAMTS13Q76LX8 1427 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 KIAA1107Q9UPP5 1409 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 CHD6Q8TD26 2715 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 SLC5A10A0PJK1 596 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 PQLC2LA1A4F0 135 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 OR2AT4A6NND4 320 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 ZNF726A6NNF4 738 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 TCAPO15273 167 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 ZNF208O43345 1280 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 RNF13O43567 381 aa1.6□□□□□ -2.15
VRK1-202ENST00000553683 ZNF207O43670 478 aaKnown RBP1.6□□□□□ -2.15
VRK1-202ENST00000553683 WBP4O75554 376 aaKnown RBP1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms