RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 RNF113BQ8IZP6 322 aaKnown RBP11□□□□□ -0.65
PRPF39-204ENST00000553605 OR6V1Q8N148 313 aa11□□□□□ -0.65
PRPF39-204ENST00000553605 CYB561A3Q8NBI2 242 aa11□□□□□ -0.65
PRPF39-204ENST00000553605 LZICQ8WZA0 190 aa11□□□□□ -0.65
PRPF39-204ENST00000553605 LYZL4Q96KX0 146 aa11□□□□□ -0.65
PRPF39-204ENST00000553605 P2RX4Q99571 388 aa11□□□□□ -0.65
PRPF39-204ENST00000553605 TMEM109Q9BVC6 243 aa11□□□□□ -0.65
PRPF39-204ENST00000553605 OPA3Q9H6K4 179 aa11□□□□□ -0.65
PRPF39-204ENST00000553605 PPP1R3EQ9H7J1 279 aa11□□□□□ -0.65
PRPF39-204ENST00000553605 RHCGQ9UBD6 479 aa11□□□□□ -0.65
PRPF39-204ENST00000553605 NLKQ9UBE8 527 aa11□□□□□ -0.65
PRPF39-204ENST00000553605 N6AMT1Q9Y5N5 214 aa11□□□□□ -0.65
PRPF39-204ENST00000553605 IER3IP1Q9Y5U9 82 aa11□□□□□ -0.65
PRPF39-204ENST00000553605 NDUFB2O95178 105 aa10.99□□□□□ -0.65
PRPF39-204ENST00000553605 JUNBP17275 347 aaPredicted RBP10.99□□□□□ -0.65
PRPF39-204ENST00000553605 LUMP51884 338 aaPredicted RBP10.99□□□□□ -0.65
PRPF39-204ENST00000553605 WDR4P57081 412 aaKnown RBP10.99□□□□□ -0.65
PRPF39-204ENST00000553605 OR12D2P58182 307 aa10.99□□□□□ -0.65
PRPF39-204ENST00000553605 RPL31P62899 125 aaKnown RBP10.99□□□□□ -0.65
PRPF39-204ENST00000553605 DRAM2Q6UX65 266 aa10.99□□□□□ -0.65
PRPF39-204ENST00000553605 C8orf86Q6ZUL3 223 aa10.99□□□□□ -0.65
PRPF39-204ENST00000553605 KRT77Q7Z794 578 aa10.99□□□□□ -0.65
PRPF39-204ENST00000553605 RPL3LQ92901 407 aaKnown RBP10.99□□□□□ -0.65
PRPF39-204ENST00000553605 USE1Q9NZ43 259 aa10.99□□□□□ -0.65
PRPF39-204ENST00000553605 SMAD5-AS1Q9Y6J3 95 aa10.99□□□□□ -0.65
PRPF39-204ENST00000553605 PCLOQ9Y6V0 5065 aa10.98□□□□□ -0.65
PRPF39-204ENST00000553605 IGKV1D-17A0A075B6S4 117 aa10.98□□□□□ -0.65
PRPF39-204ENST00000553605 A0A087WUU8 490 aa10.98□□□□□ -0.65
PRPF39-204ENST00000553605 FAM90A22PA8MWA6 464 aa10.98□□□□□ -0.65
PRPF39-204ENST00000553605 ODF3BA8MYP8 253 aa10.98□□□□□ -0.65
PRPF39-204ENST00000553605 PTP4A3O75365 173 aa10.98□□□□□ -0.65
PRPF39-204ENST00000553605 CCL3L1P16619 93 aa10.98□□□□□ -0.65
PRPF39-204ENST00000553605 OTX1P32242 354 aaPredicted RBP10.98□□□□□ -0.65
PRPF39-204ENST00000553605 YAP1P46937 504 aaKnown RBP10.98□□□□□ -0.65
PRPF39-204ENST00000553605 GZMMP51124 257 aa10.98□□□□□ -0.65
PRPF39-204ENST00000553605 SLC7A2P52569 658 aa10.98□□□□□ -0.65
PRPF39-204ENST00000553605 CAPZA1P52907 286 aa10.98□□□□□ -0.65
PRPF39-204ENST00000553605 SLC18A1P54219 525 aa10.98□□□□□ -0.65
PRPF39-204ENST00000553605 RPL23AP62750 156 aaKnown RBP10.98□□□□□ -0.65
PRPF39-204ENST00000553605 SLC34A1Q06495 639 aa10.98□□□□□ -0.65
PRPF39-204ENST00000553605 TRAM2Q15035 370 aa10.98□□□□□ -0.65
PRPF39-204ENST00000553605 KRT71Q3SY84 523 aa10.98□□□□□ -0.65
PRPF39-204ENST00000553605 ABCA11PQ4W5N1 156 aa10.98□□□□□ -0.65
PRPF39-204ENST00000553605 TBPL2Q6SJ96 375 aa10.98□□□□□ -0.65
PRPF39-204ENST00000553605 ZNF730Q6ZMV8 503 aa10.98□□□□□ -0.65
PRPF39-204ENST00000553605 C18orf65Q6ZTR6 163 aa10.98□□□□□ -0.65
PRPF39-204ENST00000553605 MBOAT2Q6ZWT7 520 aa10.98□□□□□ -0.65
PRPF39-204ENST00000553605 OSR2Q8N2R0 312 aa10.98□□□□□ -0.65
PRPF39-204ENST00000553605 ANKRD42Q8N9B4 389 aa10.98□□□□□ -0.65
PRPF39-204ENST00000553605 SPSB4Q96A44 273 aa10.98□□□□□ -0.65
PRPF39-204ENST00000553605 AKR1E2Q96JD6 320 aa10.98□□□□□ -0.65
PRPF39-204ENST00000553605 GPX7Q96SL4 187 aaPredicted RBP10.98□□□□□ -0.65
PRPF39-204ENST00000553605 MICU1Q9BPX6 476 aa10.98□□□□□ -0.65
PRPF39-204ENST00000553605 FNDC11Q9BVV2 318 aa10.98□□□□□ -0.65
PRPF39-204ENST00000553605 NSRP1Q9H0G5 558 aaKnown RBP10.98□□□□□ -0.65
PRPF39-204ENST00000553605 ZMAT4Q9H898 229 aa10.98□□□□□ -0.65
PRPF39-204ENST00000553605 HILPDAQ9Y5L2 63 aa10.98□□□□□ -0.65
PRPF39-204ENST00000553605 RBMY1BA6NDE4 496 aaKnown RBP10.97□□□□□ -0.65
PRPF39-204ENST00000553605 RBMY1EA6NEQ0 496 aaKnown RBP10.97□□□□□ -0.65
PRPF39-204ENST00000553605 NUDT19A8MXV4 375 aa10.97□□□□□ -0.65
PRPF39-204ENST00000553605 XRCC2O43543 280 aa10.97□□□□□ -0.65
PRPF39-204ENST00000553605 TXNDC12O95881 172 aa10.97□□□□□ -0.65
PRPF39-204ENST00000553605 IFNA14P01570 189 aa10.97□□□□□ -0.65
PRPF39-204ENST00000553605 HLA-DQA2P01906 255 aa10.97□□□□□ -0.65
PRPF39-204ENST00000553605 RBMY1DP0C7P1 496 aaKnown RBP10.97□□□□□ -0.65
PRPF39-204ENST00000553605 TROVE2P10155 538 aaKnown RBP eCLIP10.97□□□□□ -0.65
PRPF39-204ENST00000553605 SLC2A1P11166 492 aa10.97□□□□□ -0.65
PRPF39-204ENST00000553605 PSG2P11465 335 aa10.97□□□□□ -0.65
PRPF39-204ENST00000553605 GLRA1P23415 457 aa10.97□□□□□ -0.65
PRPF39-204ENST00000553605 SLC6A1P30531 599 aa10.97□□□□□ -0.65
PRPF39-204ENST00000553605 FAM3AP98173 230 aa10.97□□□□□ -0.65
PRPF39-204ENST00000553605 C9orf66Q5T8R8 295 aa10.97□□□□□ -0.65
PRPF39-204ENST00000553605 AGBL2Q5U5Z8 902 aa10.97□□□□□ -0.65
PRPF39-204ENST00000553605 ZNF626Q68DY1 528 aa10.97□□□□□ -0.65
PRPF39-204ENST00000553605 SLC16A9Q7RTY1 509 aa10.97□□□□□ -0.65
PRPF39-204ENST00000553605 C16orf82Q7Z2V1 217 aa10.97□□□□□ -0.65
PRPF39-204ENST00000553605 OR2W3Q7Z3T1 314 aa10.97□□□□□ -0.65
PRPF39-204ENST00000553605 OFCC1Q8IZS5 231 aa10.97□□□□□ -0.65
PRPF39-204ENST00000553605 DPP10Q8N608 796 aa10.97□□□□□ -0.65
PRPF39-204ENST00000553605 OR13D1Q8NGV5 346 aa10.97□□□□□ -0.65
PRPF39-204ENST00000553605 CAPSLQ8WWF8 208 aa10.97□□□□□ -0.65
PRPF39-204ENST00000553605 VNN3Q9NY84 501 aa10.97□□□□□ -0.65
PRPF39-204ENST00000553605 SIGLEC7Q9Y286 467 aa10.97□□□□□ -0.65
PRPF39-204ENST00000553605 HERC2O95714 4834 aa10.97□□□□□ -0.65
PRPF39-204ENST00000553605 PSMB11A5LHX3 300 aa10.96□□□□□ -0.65
PRPF39-204ENST00000553605 ANXA2P2A6NMY6 339 aa10.96□□□□□ -0.65
PRPF39-204ENST00000553605 JTBO76095 146 aa10.96□□□□□ -0.65
PRPF39-204ENST00000553605 ENTPD1P49961 510 aa10.96□□□□□ -0.65
PRPF39-204ENST00000553605 RPS6KA3P51812 740 aa10.96□□□□□ -0.65
PRPF39-204ENST00000553605 PRKXP51817 358 aa10.96□□□□□ -0.65
PRPF39-204ENST00000553605 RAB25P57735 213 aa10.96□□□□□ -0.65
PRPF39-204ENST00000553605 DYNC1I2Q13409 638 aaKnown RBP10.96□□□□□ -0.65
PRPF39-204ENST00000553605 ZNF770Q6IQ21 691 aaPredicted RBP10.96□□□□□ -0.65
PRPF39-204ENST00000553605 DPY19L2P2Q6ZN68 376 aa10.96□□□□□ -0.65
PRPF39-204ENST00000553605 RRM2BQ7LG56 351 aa10.96□□□□□ -0.65
PRPF39-204ENST00000553605 OR11H6Q8NGC7 330 aa10.96□□□□□ -0.65
PRPF39-204ENST00000553605 OR4M1Q8NGD0 313 aa10.96□□□□□ -0.65
PRPF39-204ENST00000553605 OR2T27Q8NH04 317 aa10.96□□□□□ -0.65
PRPF39-204ENST00000553605 SDSLQ96GA7 329 aa10.96□□□□□ -0.65
PRPF39-204ENST00000553605 TPD52L3Q96J77 140 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms