RNA–Protein interactions for RNA: ENST00000553576.5

VIPAS39-204, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-204ENST00000553576 F5H5K5 113 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 FABP7O15540 132 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 MRPL33O75394 65 aaKnown RBP5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 OR2A4O95047 310 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 FARS2O95363 451 aaKnown RBP5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 SYNGR4O95473 234 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 MMP7P09237 267 aaPredicted RBP5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 FAM87AP0C7U9 286 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 FTH1P19P0C7X4 201 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 ZNF735P0CB33 412 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 SLC2A1P11166 492 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 ANXA3P12429 323 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 GTF2F2P13984 249 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 ZNF32P17041 273 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 TBPP20226 339 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 RCVRNP35243 200 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 PTGFRP43088 359 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 PSG4Q00888 419 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 IKZF1Q13422 519 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 MEF2DQ14814 521 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 ARL6IP1Q15041 203 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 PPA1Q15181 289 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 RNPS1Q15287 305 aaKnown RBP5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 KISS1Q15726 138 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 UBE2V2Q15819 145 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 CEACAM16Q2WEN9 425 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 MOGAT2Q3SYC2 334 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 CDNFQ49AH0 187 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 GLIPR1L1Q6UWM5 242 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 ASCL4Q6XD76 172 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 ZNF782Q6ZMW2 699 aaPredicted RBP5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 COLCA1Q6ZS62 124 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 DPPA2Q7Z7J5 298 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 GABRG1Q8N1C3 465 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 LRRC18Q8N456 261 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 OR13C9Q8NGT0 318 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 CAPSLQ8WWF8 208 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 ASB13Q8WXK3 278 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 SPSB4Q96A44 273 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 SPSB1Q96BD6 273 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 ZNF845Q96IR2 970 aaPredicted RBP5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 OR2A7Q96R45 310 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 PRRX2Q99811 253 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 TM2D1Q9BX74 207 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 OR2H1Q9GZK4 316 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 PRDM14Q9GZV8 571 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 LPAR5Q9H1C0 372 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 WNT5BQ9H1J7 359 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 KCNK15Q9H427 330 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 ZNF552Q9H707 407 aaPredicted RBP5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 EXO5Q9H790 373 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 ZDHHC11Q9H8X9 412 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 ASCL3Q9NQ33 180 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 DLL4Q9NR61 685 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 PLA2G3Q9NZ20 509 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 MRPL15Q9P015 296 aaKnown RBP5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 UPB1Q9UBR1 384 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 SCP2D1Q9UJQ7 156 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 MCTS1Q9ULC4 181 aaKnown RBP5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 FLVCR2Q9UPI3 526 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 MRPS28Q9Y2Q9 187 aaKnown RBP5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 NOSIPQ9Y314 301 aaKnown RBP5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 OTOGLQ3ZCN5 2332 aa5.24□□□□□ -1.57
VIPAS39-204ENST00000553576 C5orf63A6NC05 138 aa5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 CEACAM18A8MTB9 384 aa5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 FOXI3A8MTJ6 420 aaPredicted RBP5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 PYCARD-AS1I3L0S3 204 aa5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 ARPC1BO15143 372 aaKnown RBP5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 XRCC2O43543 280 aa5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 CREBL2O60519 120 aaPredicted RBP5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 CDC14BO60729 498 aa5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 RAB3DO95716 219 aa5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 CYB5AP00167 134 aa5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 CD3DP04234 171 aa5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 C1QTNF9P0C862 333 aa5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 LIPCP11150 499 aa5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 CXCL3P19876 107 aa5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 ANOS1P23352 680 aa5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 MAGEA5P43359 124 aa5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 CBX5P45973 191 aa5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 VEGFCP49767 419 aa5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 MEOX1P50221 254 aa5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 TMEM50BP56557 158 aa5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 PPIAP62937 165 aaKnown RBP5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 RPS27AP62979 156 aaKnown RBP5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 MRPS15P82914 257 aaKnown RBP5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 SF3B4Q15427 424 aaKnown RBP eCLIP5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 OR8B8Q15620 311 aa5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 MPPED2Q15777 294 aa5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 Q5BKY6 102 aa5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 TSPO2Q5TGU0 170 aa5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 NSUN5P2Q63ZY6 315 aa5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 AWAT2Q6E213 333 aa5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 LAMTOR1Q6IAA8 161 aa5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 RTL6Q6ICC9 239 aa5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 OR10K2Q6IF99 312 aa5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 FAHD2BQ6P2I3 314 aaPredicted RBP5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 Q6ZTK2 550 aa5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 GALNTL5Q7Z4T8 443 aa5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 SKA3Q8IX90 412 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms