RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 CFHR2P36980 270 aa15.08■□□□□ 0
SHMT2-206ENST00000553529 DDOSTP39656 456 aa15.08■□□□□ 0
SHMT2-206ENST00000553529 CXCR4P61073 352 aa15.08■□□□□ 0
SHMT2-206ENST00000553529 IKZF1Q13422 519 aa15.08■□□□□ 0
SHMT2-206ENST00000553529 DEFB112Q30KQ8 113 aa15.08■□□□□ 0
SHMT2-206ENST00000553529 KCTD8Q6ZWB6 473 aa15.08■□□□□ 0
SHMT2-206ENST00000553529 SLC35F2Q8IXU6 374 aa15.08■□□□□ 0
SHMT2-206ENST00000553529 SCCPDHQ8NBX0 429 aa15.08■□□□□ 0
SHMT2-206ENST00000553529 OR51E1Q8TCB6 317 aa15.08■□□□□ 0
SHMT2-206ENST00000553529 ST8SIA4Q92187 359 aa15.08■□□□□ 0
SHMT2-206ENST00000553529 GCDHQ92947 438 aaPredicted RBP15.08■□□□□ 0
SHMT2-206ENST00000553529 YIPF3Q9GZM5 350 aa15.08■□□□□ 0
SHMT2-206ENST00000553529 MS4A7Q9GZW8 240 aaPredicted RBP15.08■□□□□ 0
SHMT2-206ENST00000553529 PBOV1Q9GZY1 135 aa15.08■□□□□ 0
SHMT2-206ENST00000553529 TLNRD1Q9H1K6 362 aa15.08■□□□□ 0
SHMT2-206ENST00000553529 RIBC2Q9H4K1 309 aa15.08■□□□□ 0
SHMT2-206ENST00000553529 ELL3Q9HB65 397 aaPredicted RBP15.08■□□□□ 0
SHMT2-206ENST00000553529 GPR84Q9NQS5 396 aa15.08■□□□□ 0
SHMT2-206ENST00000553529 C14orf119Q9NWQ9 140 aa15.08■□□□□ 0
SHMT2-206ENST00000553529 AASSQ9UDR5 926 aa15.08■□□□□ 0
SHMT2-206ENST00000553529 IKZF2Q9UKS7 526 aa15.08■□□□□ 0
SHMT2-206ENST00000553529 TMEM269A0A1B0GVZ9 245 aa15.07■□□□□ 0
SHMT2-206ENST00000553529 TMEM89A2RUT3 159 aa15.07■□□□□ 0
SHMT2-206ENST00000553529 FPR2P25090 351 aa15.07■□□□□ 0
SHMT2-206ENST00000553529 FASP25445 335 aa15.07■□□□□ 0
SHMT2-206ENST00000553529 GNALP38405 381 aa15.07■□□□□ 0
SHMT2-206ENST00000553529 GPM6AP51674 278 aa15.07■□□□□ 0
SHMT2-206ENST00000553529 BAMBIQ13145 260 aa15.07■□□□□ 0
SHMT2-206ENST00000553529 BTN2A1Q7KYR7 527 aa15.07■□□□□ 0
SHMT2-206ENST00000553529 MEPCEQ7L2J0 689 aaKnown RBP15.07■□□□□ 0
SHMT2-206ENST00000553529 PLPP7Q8NBV4 271 aa15.07■□□□□ 0
SHMT2-206ENST00000553529 TMEM163Q8TC26 289 aa15.07■□□□□ 0
SHMT2-206ENST00000553529 RNF170Q96K19 258 aa15.07■□□□□ 0
SHMT2-206ENST00000553529 ZNF488Q96MN9 340 aa15.07■□□□□ 0
SHMT2-206ENST00000553529 CNN2Q99439 309 aaKnown RBP15.07■□□□□ 0
SHMT2-206ENST00000553529 SP140LQ9H930 580 aa15.07■□□□□ 0
SHMT2-206ENST00000553529 ERVK-18Q9QC07 812 aa15.07■□□□□ 0
SHMT2-206ENST00000553529 MRM2Q9UI43 246 aaKnown RBP15.07■□□□□ 0
SHMT2-206ENST00000553529 GTF2A1LQ9UNN4 478 aa15.07■□□□□ 0
SHMT2-206ENST00000553529 SLC22A13Q9Y226 551 aa15.07■□□□□ 0
SHMT2-206ENST00000553529 TRAV38-1A0A0B4J264 116 aa15.06■□□□□ 0
SHMT2-206ENST00000553529 H3BNX3 289 aa15.06■□□□□ 0
SHMT2-206ENST00000553529 CST4P01036 141 aa15.06■□□□□ 0
SHMT2-206ENST00000553529 IGLV3-1P01715 115 aa15.06■□□□□ 0
SHMT2-206ENST00000553529 TTRP02766 147 aa15.06■□□□□ 0
SHMT2-206ENST00000553529 DCTDP32321 178 aa15.06■□□□□ 0
SHMT2-206ENST00000553529 ARF6P62330 175 aa15.06■□□□□ 0
SHMT2-206ENST00000553529 ESRRGP62508 458 aa15.06■□□□□ 0
SHMT2-206ENST00000553529 SLC9A3R2Q15599 337 aa15.06■□□□□ 0
SHMT2-206ENST00000553529 ODF4Q2M2E3 257 aa15.06■□□□□ 0
SHMT2-206ENST00000553529 AWAT1Q58HT5 328 aa15.06■□□□□ 0
SHMT2-206ENST00000553529 RHOUQ7L0Q8 258 aa15.06■□□□□ 0
SHMT2-206ENST00000553529 ASRGL1Q7L266 308 aa15.06■□□□□ 0
SHMT2-206ENST00000553529 COMMD2Q86X83 199 aa15.06■□□□□ 0
SHMT2-206ENST00000553529 TEX29Q8N6K0 151 aa15.06■□□□□ 0
SHMT2-206ENST00000553529 SPERTQ8NA61 448 aa15.06■□□□□ 0
SHMT2-206ENST00000553529 CSNK2A3Q8NEV1 391 aa15.06■□□□□ 0
SHMT2-206ENST00000553529 OR51G2Q8NGK0 314 aa15.06■□□□□ 0
SHMT2-206ENST00000553529 ZFAND2BQ8WV99 257 aa15.06■□□□□ 0
SHMT2-206ENST00000553529 DUS3LQ96G46 650 aaKnown RBP15.06■□□□□ 0
SHMT2-206ENST00000553529 SIRPDQ9H106 197 aa15.06■□□□□ 0
SHMT2-206ENST00000553529 NOP16Q9Y3C1 178 aaKnown RBP15.06■□□□□ 0
SHMT2-206ENST00000553529 SRRM5B3KS81 715 aa15.05■□□□□ -0
SHMT2-206ENST00000553529 ENSAO43768 121 aaKnown RBP15.05■□□□□ -0
SHMT2-206ENST00000553529 RPP14O95059 124 aaKnown RBP15.05■□□□□ -0
SHMT2-206ENST00000553529 APOC1P02654 83 aa15.05■□□□□ -0
SHMT2-206ENST00000553529 OMGP23515 440 aa15.05■□□□□ -0
SHMT2-206ENST00000553529 SCGB2A2Q13296 93 aa15.05■□□□□ -0
SHMT2-206ENST00000553529 KPNB1Q14974 876 aaKnown RBP15.05■□□□□ -0
SHMT2-206ENST00000553529 LCN1P1Q5VSP4 162 aa15.05■□□□□ -0
SHMT2-206ENST00000553529 STUMQ69YW2 141 aa15.05■□□□□ -0
SHMT2-206ENST00000553529 ZNF322Q6U7Q0 402 aaPredicted RBP15.05■□□□□ -0
SHMT2-206ENST00000553529 MOB3CQ70IA8 216 aa15.05■□□□□ -0
SHMT2-206ENST00000553529 ZDHHC13Q8IUH4 622 aa15.05■□□□□ -0
SHMT2-206ENST00000553529 ZDHHC23Q8IYP9 409 aa15.05■□□□□ -0
SHMT2-206ENST00000553529 GALNT4Q8N4A0 578 aa15.05■□□□□ -0
SHMT2-206ENST00000553529 MICU1Q9BPX6 476 aa15.05■□□□□ -0
SHMT2-206ENST00000553529 RTL8AQ9BWD3 113 aa15.05■□□□□ -0
SHMT2-206ENST00000553529 CENPVL3A0A0U1RRI6 287 aa15.04■□□□□ -0
SHMT2-206ENST00000553529 A0A1W2PRD5 423 aa15.04■□□□□ -0
SHMT2-206ENST00000553529 A0A1W2PRF3 423 aa15.04■□□□□ -0
SHMT2-206ENST00000553529 A0A1W2PRM7 423 aa15.04■□□□□ -0
SHMT2-206ENST00000553529 ZNF879B4DU55 563 aa15.04■□□□□ -0
SHMT2-206ENST00000553529 ZNF732B4DXR9 585 aa15.04■□□□□ -0
SHMT2-206ENST00000553529 P2RY10O00398 339 aa15.04■□□□□ -0
SHMT2-206ENST00000553529 HOXA3O43365 443 aaPredicted RBP15.04■□□□□ -0
SHMT2-206ENST00000553529 TOX4O94842 621 aa15.04■□□□□ -0
SHMT2-206ENST00000553529 HOXB6P17509 224 aaKnown RBP15.04■□□□□ -0
SHMT2-206ENST00000553529 CEBPDP49716 269 aaPredicted RBP15.04■□□□□ -0
SHMT2-206ENST00000553529 ROM1Q03395 351 aa15.04■□□□□ -0
SHMT2-206ENST00000553529 DGUOKQ16854 277 aa15.04■□□□□ -0
SHMT2-206ENST00000553529 NXNL2Q5VZ03 156 aa15.04■□□□□ -0
SHMT2-206ENST00000553529 ZNF679Q8IYX0 411 aa15.04■□□□□ -0
SHMT2-206ENST00000553529 PNKDQ8N490 385 aa15.04■□□□□ -0
SHMT2-206ENST00000553529 FAM81AQ8TBF8 368 aa15.04■□□□□ -0
SHMT2-206ENST00000553529 DNAJC9Q8WXX5 260 aa15.04■□□□□ -0
SHMT2-206ENST00000553529 LHX4Q969G2 390 aa15.04■□□□□ -0
SHMT2-206ENST00000553529 GAFA1Q96PS6 74 aa15.04■□□□□ -0
SHMT2-206ENST00000553529 MROQ9BYG7 248 aa15.04■□□□□ -0
SHMT2-206ENST00000553529 RGCCQ9H4X1 137 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms