RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 A0A087WZY1 265 aa3.58□□□□□ -1.84
PCNX1-205ENST00000553508 NSG1A0A0A6YYJ2 146 aa3.58□□□□□ -1.84
PCNX1-205ENST00000553508 MIF4GDA9UHW6 222 aaKnown RBP3.58□□□□□ -1.84
PCNX1-205ENST00000553508 AP3B1O00203 1094 aa3.58□□□□□ -1.84
PCNX1-205ENST00000553508 TXNDC9O14530 226 aa3.58□□□□□ -1.84
PCNX1-205ENST00000553508 SERPINA7P05543 415 aa3.58□□□□□ -1.84
PCNX1-205ENST00000553508 CD5P06127 495 aa3.58□□□□□ -1.84
PCNX1-205ENST00000553508 ANXA5P08758 320 aa3.58□□□□□ -1.84
PCNX1-205ENST00000553508 COX6B1P14854 86 aa3.58□□□□□ -1.84
PCNX1-205ENST00000553508 CD9P21926 228 aa3.58□□□□□ -1.84
PCNX1-205ENST00000553508 MSNP26038 577 aaKnown RBP3.58□□□□□ -1.84
PCNX1-205ENST00000553508 BTCP35070 178 aa3.58□□□□□ -1.84
PCNX1-205ENST00000553508 HSD17B2P37059 387 aa3.58□□□□□ -1.84
PCNX1-205ENST00000553508 TTPAP49638 278 aa3.58□□□□□ -1.84
PCNX1-205ENST00000553508 GBX2P52951 348 aaPredicted RBP3.58□□□□□ -1.84
PCNX1-205ENST00000553508 RWDD2BP57060 319 aa3.58□□□□□ -1.84
PCNX1-205ENST00000553508 ACTA2P62736 377 aa3.58□□□□□ -1.84
PCNX1-205ENST00000553508 ACTC1P68032 377 aa3.58□□□□□ -1.84
PCNX1-205ENST00000553508 CDH17Q12864 832 aa3.58□□□□□ -1.84
PCNX1-205ENST00000553508 ART3Q13508 389 aa3.58□□□□□ -1.84
PCNX1-205ENST00000553508 POU6F1Q14863 301 aa3.58□□□□□ -1.84
PCNX1-205ENST00000553508 FAM83EQ2M2I3 478 aa3.58□□□□□ -1.84
PCNX1-205ENST00000553508 DEFB110Q30KQ9 67 aa3.58□□□□□ -1.84
PCNX1-205ENST00000553508 LRRC23Q53EV4 343 aaPredicted RBP3.58□□□□□ -1.84
PCNX1-205ENST00000553508 LRRC10Q5BKY1 277 aa3.58□□□□□ -1.84
PCNX1-205ENST00000553508 GPR157Q5UAW9 335 aa3.58□□□□□ -1.84
PCNX1-205ENST00000553508 LRRC6Q86X45 466 aa3.58□□□□□ -1.84
PCNX1-205ENST00000553508 VSTM4Q8IW00 320 aa3.58□□□□□ -1.84
PCNX1-205ENST00000553508 SYCE1Q8N0S2 351 aa3.58□□□□□ -1.84
PCNX1-205ENST00000553508 CATSPER1Q8NEC5 780 aa3.58□□□□□ -1.84
PCNX1-205ENST00000553508 OR13C4Q8NGS5 318 aa3.58□□□□□ -1.84
PCNX1-205ENST00000553508 PEX13Q92968 403 aa3.58□□□□□ -1.84
PCNX1-205ENST00000553508 RERGQ96A58 199 aaPredicted RBP3.58□□□□□ -1.84
PCNX1-205ENST00000553508 RAD51AP1Q96B01 352 aa3.58□□□□□ -1.84
PCNX1-205ENST00000553508 SEC22AQ96IW7 307 aa3.58□□□□□ -1.84
PCNX1-205ENST00000553508 DNAJC1Q96KC8 554 aaKnown RBP3.58□□□□□ -1.84
PCNX1-205ENST00000553508 C4orf36Q96KX1 117 aa3.58□□□□□ -1.84
PCNX1-205ENST00000553508 TSNARE1Q96NA8 513 aa3.58□□□□□ -1.84
PCNX1-205ENST00000553508 PANX2Q96RD6 677 aa3.58□□□□□ -1.84
PCNX1-205ENST00000553508 EBNA1BP2Q99848 306 aaKnown RBP3.58□□□□□ -1.84
PCNX1-205ENST00000553508 FRMD8P1Q9BZ68 369 aaPredicted RBP3.58□□□□□ -1.84
PCNX1-205ENST00000553508 RNF167Q9H6Y7 350 aa3.58□□□□□ -1.84
PCNX1-205ENST00000553508 FAM60AQ9NP50 221 aa3.58□□□□□ -1.84
PCNX1-205ENST00000553508 FARSBQ9NSD9 589 aaKnown RBP3.58□□□□□ -1.84
PCNX1-205ENST00000553508 DHCR7Q9UBM7 475 aaKnown RBP3.58□□□□□ -1.84
PCNX1-205ENST00000553508 SNX6Q9UNH7 406 aa3.58□□□□□ -1.84
PCNX1-205ENST00000553508 HYOU1Q9Y4L1 999 aa3.58□□□□□ -1.84
PCNX1-205ENST00000553508 SLC25A15Q9Y619 301 aa3.58□□□□□ -1.84
PCNX1-205ENST00000553508 FLNAP21333 2647 aaKnown RBP3.58□□□□□ -1.84
PCNX1-205ENST00000553508 NUP214P35658 2090 aaPredicted RBP3.58□□□□□ -1.84
PCNX1-205ENST00000553508 A0A1B0GWJ7 208 aa3.57□□□□□ -1.84
PCNX1-205ENST00000553508 SLC5A10A0PJK1 596 aa3.57□□□□□ -1.84
PCNX1-205ENST00000553508 CCL22O00626 93 aa3.57□□□□□ -1.84
PCNX1-205ENST00000553508 ZSCAN12O43309 604 aa3.57□□□□□ -1.84
PCNX1-205ENST00000553508 KRT8P05787 483 aa3.57□□□□□ -1.84
PCNX1-205ENST00000553508 ABOP16442 354 aa3.57□□□□□ -1.84
PCNX1-205ENST00000553508 NT5EP21589 574 aa3.57□□□□□ -1.84
PCNX1-205ENST00000553508 CMPK1P30085 196 aa3.57□□□□□ -1.84
PCNX1-205ENST00000553508 RPA3P35244 121 aaPredicted RBP3.57□□□□□ -1.84
PCNX1-205ENST00000553508 FDFT1P37268 417 aa3.57□□□□□ -1.84
PCNX1-205ENST00000553508 SLC26A3P40879 764 aa3.57□□□□□ -1.84
PCNX1-205ENST00000553508 GABRA4P48169 554 aa3.57□□□□□ -1.84
PCNX1-205ENST00000553508 MARCKSL1P49006 195 aa3.57□□□□□ -1.84
PCNX1-205ENST00000553508 VSX2P58304 361 aaPredicted RBP3.57□□□□□ -1.84
PCNX1-205ENST00000553508 SKP1P63208 163 aa3.57□□□□□ -1.84
PCNX1-205ENST00000553508 RSPO1Q2MKA7 263 aaPredicted RBP3.57□□□□□ -1.84
PCNX1-205ENST00000553508 ATAD3BQ5T9A4 648 aa3.57□□□□□ -1.84
PCNX1-205ENST00000553508 PTRHD1Q6GMV3 140 aaKnown RBP3.57□□□□□ -1.84
PCNX1-205ENST00000553508 NDUFAF7Q7L592 441 aa3.57□□□□□ -1.84
PCNX1-205ENST00000553508 PEX26Q7Z412 305 aa3.57□□□□□ -1.84
PCNX1-205ENST00000553508 ZNF573Q86YE8 665 aa3.57□□□□□ -1.84
PCNX1-205ENST00000553508 PIANPQ8IYJ0 282 aa3.57□□□□□ -1.84
PCNX1-205ENST00000553508 CENPLQ8N0S6 344 aaPredicted RBP3.57□□□□□ -1.84
PCNX1-205ENST00000553508 RNF182Q8N6D2 247 aa3.57□□□□□ -1.84
PCNX1-205ENST00000553508 OTUD6BQ8N6M0 293 aa3.57□□□□□ -1.84
PCNX1-205ENST00000553508 OR11G2Q8NGC1 345 aa3.57□□□□□ -1.84
PCNX1-205ENST00000553508 MCOLN3Q8TDD5 553 aa3.57□□□□□ -1.84
PCNX1-205ENST00000553508 NAT14Q8WUY8 206 aa3.57□□□□□ -1.84
PCNX1-205ENST00000553508 CMTM7Q96FZ5 175 aa3.57□□□□□ -1.84
PCNX1-205ENST00000553508 CHP1Q99653 195 aa3.57□□□□□ -1.84
PCNX1-205ENST00000553508 ZNF160Q9HCG1 818 aa3.57□□□□□ -1.84
PCNX1-205ENST00000553508 SPATA7Q9P0W8 599 aa3.57□□□□□ -1.84
PCNX1-205ENST00000553508 CTSFQ9UBX1 484 aa3.57□□□□□ -1.84
PCNX1-205ENST00000553508 SEC14L3Q9UDX4 400 aa3.57□□□□□ -1.84
PCNX1-205ENST00000553508 LAMP5Q9UJQ1 280 aa3.57□□□□□ -1.84
PCNX1-205ENST00000553508 C3orf18Q9UK00 162 aa3.57□□□□□ -1.84
PCNX1-205ENST00000553508 NSD1Q96L73 2696 aaPredicted RBP3.57□□□□□ -1.84
PCNX1-205ENST00000553508 PCNX1Q96RV3 2341 aa3.56□□□□□ -1.84
PCNX1-205ENST00000553508 NUP210LQ5VU65 1888 aa3.56□□□□□ -1.84
PCNX1-205ENST00000553508 RELNP78509 3460 aa3.56□□□□□ -1.84
PCNX1-205ENST00000553508 STAB1Q9NY15 2570 aa3.56□□□□□ -1.84
PCNX1-205ENST00000553508 IGKV1D-17A0A075B6S4 117 aa3.56□□□□□ -1.84
PCNX1-205ENST00000553508 NPIPA7E9PJI5 369 aa3.56□□□□□ -1.84
PCNX1-205ENST00000553508 CCL21O00585 134 aa3.56□□□□□ -1.84
PCNX1-205ENST00000553508 PRMT5O14744 637 aaPredicted RBP3.56□□□□□ -1.84
PCNX1-205ENST00000553508 CATP04040 527 aaKnown RBP3.56□□□□□ -1.84
PCNX1-205ENST00000553508 MRPL3P09001 348 aaKnown RBP3.56□□□□□ -1.84
PCNX1-205ENST00000553508 NPIPA8P0DM63 369 aa3.56□□□□□ -1.84
PCNX1-205ENST00000553508 CCR7P32248 378 aa3.56□□□□□ -1.84
PCNX1-205ENST00000553508 CA5AP35218 305 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms