RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 ANXA2P2A6NMY6 339 aa11.87□□□□□ -0.51
PTCH1-226ENST00000553011 E9PI62 339 aa11.87□□□□□ -0.51
PTCH1-226ENST00000553011 IFNL4K9M1U5 179 aa11.87□□□□□ -0.51
PTCH1-226ENST00000553011 LMX1BO60663 402 aa11.87□□□□□ -0.51
PTCH1-226ENST00000553011 CCL1P22362 96 aa11.87□□□□□ -0.51
PTCH1-226ENST00000553011 DCKP27707 260 aa11.87□□□□□ -0.51
PTCH1-226ENST00000553011 THBS2P35442 1172 aa11.87□□□□□ -0.51
PTCH1-226ENST00000553011 GZMKP49863 264 aa11.87□□□□□ -0.51
PTCH1-226ENST00000553011 BTG1P62324 171 aa11.87□□□□□ -0.51
PTCH1-226ENST00000553011 CSNK2BP67870 215 aa11.87□□□□□ -0.51
PTCH1-226ENST00000553011 MZT1Q08AG7 82 aa11.87□□□□□ -0.51
PTCH1-226ENST00000553011 ZNF181Q2M3W8 571 aa11.87□□□□□ -0.51
PTCH1-226ENST00000553011 CYB5R2Q6BCY4 276 aa11.87□□□□□ -0.51
PTCH1-226ENST00000553011 Q6ZSR3 168 aa11.87□□□□□ -0.51
PTCH1-226ENST00000553011 DOK3Q7L591 496 aa11.87□□□□□ -0.51
PTCH1-226ENST00000553011 KRT74Q7RTS7 529 aa11.87□□□□□ -0.51
PTCH1-226ENST00000553011 ZDHHC23Q8IYP9 409 aa11.87□□□□□ -0.51
PTCH1-226ENST00000553011 BPIFB6Q8NFQ5 453 aa11.87□□□□□ -0.51
PTCH1-226ENST00000553011 OR11L1Q8NGX0 322 aa11.87□□□□□ -0.51
PTCH1-226ENST00000553011 Q8TCH9 128 aa11.87□□□□□ -0.51
PTCH1-226ENST00000553011 OR5P3Q8WZ94 311 aa11.87□□□□□ -0.51
PTCH1-226ENST00000553011 HPS1Q92902 700 aa11.87□□□□□ -0.51
PTCH1-226ENST00000553011 ERGIC1Q969X5 290 aa11.87□□□□□ -0.51
PTCH1-226ENST00000553011 MICU1Q9BPX6 476 aa11.87□□□□□ -0.51
PTCH1-226ENST00000553011 FN3KRPQ9HA64 309 aa11.87□□□□□ -0.51
PTCH1-226ENST00000553011 C14orf119Q9NWQ9 140 aa11.87□□□□□ -0.51
PTCH1-226ENST00000553011 C1orf123Q9NWV4 160 aa11.87□□□□□ -0.51
PTCH1-226ENST00000553011 UBAP1Q9NZ09 502 aa11.87□□□□□ -0.51
PTCH1-226ENST00000553011 FRRS1LQ9P0K9 344 aa11.87□□□□□ -0.51
PTCH1-226ENST00000553011 ENPP5Q9UJA9 477 aa11.87□□□□□ -0.51
PTCH1-226ENST00000553011 DIMT1Q9UNQ2 313 aaKnown RBP11.87□□□□□ -0.51
PTCH1-226ENST00000553011 V9GYS6 101 aa11.87□□□□□ -0.51
PTCH1-226ENST00000553011 NF1P21359 2839 aa11.87□□□□□ -0.51
PTCH1-226ENST00000553011 LRRC30A6NM36 301 aa11.86□□□□□ -0.51
PTCH1-226ENST00000553011 OR4C45A6NMZ5 311 aa11.86□□□□□ -0.51
PTCH1-226ENST00000553011 FAM157AC9JC47 383 aa11.86□□□□□ -0.51
PTCH1-226ENST00000553011 SYT7O43581 403 aa11.86□□□□□ -0.51
PTCH1-226ENST00000553011 ST3GAL4Q11206 333 aa11.86□□□□□ -0.51
PTCH1-226ENST00000553011 ZNF154Q13106 437 aa11.86□□□□□ -0.51
PTCH1-226ENST00000553011 ALKBH1Q13686 389 aaKnown RBP11.86□□□□□ -0.51
PTCH1-226ENST00000553011 CEP78Q5JTW2 689 aa11.86□□□□□ -0.51
PTCH1-226ENST00000553011 ZBTB37Q5TC79 503 aa11.86□□□□□ -0.51
PTCH1-226ENST00000553011 OR2G6Q5TZ20 316 aa11.86□□□□□ -0.51
PTCH1-226ENST00000553011 MOB3CQ70IA8 216 aa11.86□□□□□ -0.51
PTCH1-226ENST00000553011 AHSA2Q719I0 299 aa11.86□□□□□ -0.51
PTCH1-226ENST00000553011 C11orf53Q8IXP5 236 aa11.86□□□□□ -0.51
PTCH1-226ENST00000553011 C19orf18Q8NEA5 215 aa11.86□□□□□ -0.51
PTCH1-226ENST00000553011 OR1M1Q8NGA1 313 aa11.86□□□□□ -0.51
PTCH1-226ENST00000553011 ITFG2Q969R8 447 aa11.86□□□□□ -0.51
PTCH1-226ENST00000553011 TMEM80Q96HE8 168 aa11.86□□□□□ -0.51
PTCH1-226ENST00000553011 RNF170Q96K19 258 aa11.86□□□□□ -0.51
PTCH1-226ENST00000553011 MYCBPQ99417 103 aaPredicted RBP11.86□□□□□ -0.51
PTCH1-226ENST00000553011 GAL3ST1Q99999 423 aa11.86□□□□□ -0.51
PTCH1-226ENST00000553011 RTL8AQ9BWD3 113 aa11.86□□□□□ -0.51
PTCH1-226ENST00000553011 METTL17Q9H7H0 456 aaPredicted RBP11.86□□□□□ -0.51
PTCH1-226ENST00000553011 ZNF665Q9H7R5 613 aa11.86□□□□□ -0.51
PTCH1-226ENST00000553011 ABCB9Q9NP78 766 aa11.86□□□□□ -0.51
PTCH1-226ENST00000553011 YAE1D1Q9NRH1 226 aa11.86□□□□□ -0.51
PTCH1-226ENST00000553011 PLCXD1Q9NUJ7 323 aa11.86□□□□□ -0.51
PTCH1-226ENST00000553011 CLEC2DQ9UHP7 191 aa11.86□□□□□ -0.51
PTCH1-226ENST00000553011 PSORS1C1Q9UIG5 152 aa11.86□□□□□ -0.51
PTCH1-226ENST00000553011 hCG_1807616A0A1W2PRN6 198 aa11.85□□□□□ -0.51
PTCH1-226ENST00000553011 EFCAB10A6NFE3 127 aa11.85□□□□□ -0.51
PTCH1-226ENST00000553011 NRASP01111 189 aa11.85□□□□□ -0.51
PTCH1-226ENST00000553011 IGHV2-5P01817 119 aa11.85□□□□□ -0.51
PTCH1-226ENST00000553011 UBCP0CG48 685 aaKnown RBP11.85□□□□□ -0.51
PTCH1-226ENST00000553011 PIPP12273 146 aaPredicted RBP11.85□□□□□ -0.51
PTCH1-226ENST00000553011 IRF2P14316 349 aa11.85□□□□□ -0.51
PTCH1-226ENST00000553011 MYL12AP19105 171 aa11.85□□□□□ -0.51
PTCH1-226ENST00000553011 MYF6P23409 242 aa11.85□□□□□ -0.51
PTCH1-226ENST00000553011 VHLP40337 213 aa11.85□□□□□ -0.51
PTCH1-226ENST00000553011 GPM6AP51674 278 aa11.85□□□□□ -0.51
PTCH1-226ENST00000553011 CCR9P51686 369 aa11.85□□□□□ -0.51
PTCH1-226ENST00000553011 GTF2A1P52655 376 aaPredicted RBP11.85□□□□□ -0.51
PTCH1-226ENST00000553011 CDH15P55291 814 aa11.85□□□□□ -0.51
PTCH1-226ENST00000553011 C6orf141Q5SZD1 244 aa11.85□□□□□ -0.51
PTCH1-226ENST00000553011 PLCXD3Q63HM9 321 aa11.85□□□□□ -0.51
PTCH1-226ENST00000553011 TMEM42Q69YG0 159 aa11.85□□□□□ -0.51
PTCH1-226ENST00000553011 KCTD8Q6ZWB6 473 aa11.85□□□□□ -0.51
PTCH1-226ENST00000553011 LRRC28Q86X40 367 aaPredicted RBP11.85□□□□□ -0.51
PTCH1-226ENST00000553011 EGFL6Q8IUX8 553 aa11.85□□□□□ -0.51
PTCH1-226ENST00000553011 C1orf87Q8N0U7 546 aa11.85□□□□□ -0.51
PTCH1-226ENST00000553011 BOLLQ8N9W6 283 aaKnown RBP11.85□□□□□ -0.51
PTCH1-226ENST00000553011 OR10AC1Q8NH08 325 aa11.85□□□□□ -0.51
PTCH1-226ENST00000553011 C1orf159Q96HA4 380 aa11.85□□□□□ -0.51
PTCH1-226ENST00000553011 HIST1H2AAQ96QV6 131 aa11.85□□□□□ -0.51
PTCH1-226ENST00000553011 ANKRD60Q9BZ19 345 aa11.85□□□□□ -0.51
PTCH1-226ENST00000553011 TMEM165Q9HC07 324 aa11.85□□□□□ -0.51
PTCH1-226ENST00000553011 GPR173Q9NS66 373 aa11.85□□□□□ -0.51
PTCH1-226ENST00000553011 CNOT2Q9NZN8 540 aaKnown RBP11.85□□□□□ -0.51
PTCH1-226ENST00000553011 RNF7Q9UBF6 113 aa11.85□□□□□ -0.51
PTCH1-226ENST00000553011 CAB39Q9Y376 341 aaPredicted RBP11.85□□□□□ -0.51
PTCH1-226ENST00000553011 EXOSC1Q9Y3B2 195 aaKnown RBP11.85□□□□□ -0.51
PTCH1-226ENST00000553011 PPIAL4EA0A075B759 164 aa11.84□□□□□ -0.51
PTCH1-226ENST00000553011 DHRS7CA6NNS2 312 aa11.84□□□□□ -0.51
PTCH1-226ENST00000553011 ZNF732B4DXR9 585 aa11.84□□□□□ -0.51
PTCH1-226ENST00000553011 PPIAL4DF5H284 164 aa11.84□□□□□ -0.51
PTCH1-226ENST00000553011 C3orf80F5H4A9 247 aa11.84□□□□□ -0.51
PTCH1-226ENST00000553011 SLC1A7O00341 560 aa11.84□□□□□ -0.51
PTCH1-226ENST00000553011 TGFAP01135 160 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms