RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 MYO1DO94832 1006 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 TMEM50AO95807 157 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 LALBAP00709 142 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 RBMY1DP0C7P1 496 aaKnown RBP2.96□□□□□ -1.94
LIMA1-208ENST00000551691 CT45A10P0DMU9 189 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 SLC25A16P16260 332 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 MDKP21741 143 aaPredicted RBP2.96□□□□□ -1.94
LIMA1-208ENST00000551691 NTSP30990 170 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 RPL29P47914 159 aaKnown RBP2.96□□□□□ -1.94
LIMA1-208ENST00000551691 HCAR3P49019 387 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 PRLHRP49683 370 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 ETV1P50549 477 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 RAB9AP51151 201 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 GPM6AP51674 278 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 NDUFA8P51970 172 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 DIO3P55073 304 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 EIF3EP60228 445 aaKnown RBP2.96□□□□□ -1.94
LIMA1-208ENST00000551691 ERVK11-1P61568 191 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 RPL32P62910 135 aaKnown RBP2.96□□□□□ -1.94
LIMA1-208ENST00000551691 UBA52P62987 128 aaKnown RBP2.96□□□□□ -1.94
LIMA1-208ENST00000551691 XIAPP98170 497 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 PNOCQ13519 176 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 ARL6IP1Q15041 203 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 OXA1LQ15070 435 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 DUSP7Q16829 419 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 ALKBH6Q3KRA9 238 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 C9orf135Q5VTT2 229 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 ZNF57Q68EA5 555 aaPredicted RBP2.96□□□□□ -1.94
LIMA1-208ENST00000551691 ADAM5Q6NVV9 412 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 C16orf87Q6PH81 154 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 SBSNQ6UWP8 590 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 GABRG1Q8N1C3 465 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 GTPBP8Q8N3Z3 284 aaPredicted RBP2.96□□□□□ -1.94
LIMA1-208ENST00000551691 TRIML2Q8N7C3 387 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 BBS1Q8NFJ9 593 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 B3GNT7Q8NFL0 401 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 OR2L3Q8NG85 312 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 OR7G2Q8NG99 324 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 OR52H1Q8NGJ2 320 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 OR2A1Q8NGT9 310 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 BLOC1S5Q8TDH9 187 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 GPR151Q8TDV0 419 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 DOK4Q8TEW6 326 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 TOMM40LQ969M1 308 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 TM4SF19Q96DZ7 209 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 DCUN1D1Q96GG9 259 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 CSPG4P5Q96PW8 444 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 OR2A5Q96R48 311 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 OR5M11Q96RB7 305 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 OPRPNQ99935 248 aaPredicted RBP2.96□□□□□ -1.94
LIMA1-208ENST00000551691 SFXN3Q9BWM7 321 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 GLIPR2Q9H4G4 154 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 HAUS4Q9H6D7 363 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 HEXA-AS1Q9H8Q6 139 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 ANKRA2Q9H9E1 313 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 CAB39LQ9H9S4 337 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 DPM3Q9P2X0 92 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 YARS2Q9Y2Z4 477 aaKnown RBP2.96□□□□□ -1.94
LIMA1-208ENST00000551691 CSDC2Q9Y534 153 aaKnown RBP2.96□□□□□ -1.94
LIMA1-208ENST00000551691 ARL5AQ9Y689 179 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 PLECQ15149 4684 aaKnown RBP2.95□□□□□ -1.94
LIMA1-208ENST00000551691 SLC5A10A0PJK1 596 aa2.95□□□□□ -1.94
LIMA1-208ENST00000551691 DPRXA6NFQ7 191 aa2.95□□□□□ -1.94
LIMA1-208ENST00000551691 RPL37AP8A6NKH3 93 aa2.95□□□□□ -1.94
LIMA1-208ENST00000551691 GOSR2O14653 212 aa2.95□□□□□ -1.94
LIMA1-208ENST00000551691 HAT1O14929 419 aa2.95□□□□□ -1.94
LIMA1-208ENST00000551691 CHST10O43529 356 aa2.95□□□□□ -1.94
LIMA1-208ENST00000551691 SH3BGRLO75368 114 aa2.95□□□□□ -1.94
LIMA1-208ENST00000551691 ZFAND5O76080 213 aa2.95□□□□□ -1.94
LIMA1-208ENST00000551691 SRP72O76094 671 aaKnown RBP2.95□□□□□ -1.94
LIMA1-208ENST00000551691 GAS8-AS1O95177 125 aa2.95□□□□□ -1.94
LIMA1-208ENST00000551691 LSM8O95777 96 aaKnown RBP2.95□□□□□ -1.94
LIMA1-208ENST00000551691 LGI1O95970 557 aa2.95□□□□□ -1.94
LIMA1-208ENST00000551691 RENP00797 406 aa2.95□□□□□ -1.94
LIMA1-208ENST00000551691 CGAP01215 116 aa2.95□□□□□ -1.94
LIMA1-208ENST00000551691 C1QAP02745 245 aa2.95□□□□□ -1.94
LIMA1-208ENST00000551691 AMBPP02760 352 aa2.95□□□□□ -1.94
LIMA1-208ENST00000551691 HCKP08631 526 aa2.95□□□□□ -1.94
LIMA1-208ENST00000551691 UMPSP11172 480 aa2.95□□□□□ -1.94
LIMA1-208ENST00000551691 PRKACAP17612 351 aa2.95□□□□□ -1.94
LIMA1-208ENST00000551691 VDAC1P21796 283 aa2.95□□□□□ -1.94
LIMA1-208ENST00000551691 GDF1P27539 372 aa2.95□□□□□ -1.94
LIMA1-208ENST00000551691 CD1BP29016 333 aa2.95□□□□□ -1.94
LIMA1-208ENST00000551691 ALDH3B2P48448 385 aa2.95□□□□□ -1.94
LIMA1-208ENST00000551691 OR5I1Q13606 314 aa2.95□□□□□ -1.94
LIMA1-208ENST00000551691 FAM53BQ14153 422 aa2.95□□□□□ -1.94
LIMA1-208ENST00000551691 GNMTQ14749 295 aa2.95□□□□□ -1.94
LIMA1-208ENST00000551691 TMEM30BQ3MIR4 351 aa2.95□□□□□ -1.94
LIMA1-208ENST00000551691 C9orf66Q5T8R8 295 aa2.95□□□□□ -1.94
LIMA1-208ENST00000551691 METTL11BQ5VVY1 283 aa2.95□□□□□ -1.94
LIMA1-208ENST00000551691 OR5M10Q6IEU7 315 aa2.95□□□□□ -1.94
LIMA1-208ENST00000551691 DCUN1D2Q6PH85 259 aa2.95□□□□□ -1.94
LIMA1-208ENST00000551691 Q6ZN92 141 aa2.95□□□□□ -1.94
LIMA1-208ENST00000551691 RTL4Q6ZR62 310 aa2.95□□□□□ -1.94
LIMA1-208ENST00000551691 GDPD3Q7L5L3 318 aa2.95□□□□□ -1.94
LIMA1-208ENST00000551691 SLC16A14Q7RTX9 510 aa2.95□□□□□ -1.94
LIMA1-208ENST00000551691 OR2L13Q8N349 312 aa2.95□□□□□ -1.94
LIMA1-208ENST00000551691 LRRC25Q8N386 305 aaPredicted RBP2.95□□□□□ -1.94
LIMA1-208ENST00000551691 OR4F6Q8NGB9 312 aa2.95□□□□□ -1.94
LIMA1-208ENST00000551691 OR4K2Q8NGD2 314 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms