RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 MMP7P09237 267 aaPredicted RBP5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 SBK2P0C263 348 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 DBTP11182 482 aaKnown RBP5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 B4GALT1P15291 398 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 SLC25A16P16260 332 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 ZNF823P16415 610 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 USF1P22415 310 aaPredicted RBP5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 ARR3P36575 388 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 SRP14P37108 136 aaKnown RBP5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 SLC15A1P46059 708 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 ENTPD1P49961 510 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 UBE2NP61088 152 aaKnown RBP5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 PCBD1P61457 104 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 RAB40BQ12829 278 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 AQP6Q13520 282 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 ENDOGQ14249 297 aaKnown RBP5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 TSC22D1Q15714 1073 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 SGCAQ16586 387 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 MEP1BQ16820 701 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 SLC36A2Q495M3 483 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 HIKESHIQ53FT3 197 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 C6orf141Q5SZD1 244 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 C10orf25Q5T742 122 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 C9orf135Q5VTT2 229 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 LAIR2Q6ISS4 152 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 ADAM5Q6NVV9 412 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 TMEM65Q6PI78 240 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 UGT2A3Q6UWM9 527 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 SLC16A14Q7RTX9 510 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 SLC16A9Q7RTY1 509 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 LRRC18Q8N456 261 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 WDR31Q8NA23 367 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 OSR1Q8TAX0 266 aaPredicted RBP5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 CNIH3Q8TBE1 160 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 C10orf105Q8TEF2 133 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 HSD17B8Q92506 261 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 HTRA1Q92743 480 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 S100PBPQ96BU1 408 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 FBXO17Q96EF6 278 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 CNBD2Q96M20 576 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 INTS14Q96SY0 518 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 SH3GL3Q99963 347 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 TRAF4Q9BUZ4 470 aaPredicted RBP5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 ZNF416Q9BWM5 594 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 YIPF3Q9GZM5 350 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 KCNN2Q9H2S1 579 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 WDR76Q9H967 626 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 ADGRL4Q9HBW9 690 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 ESM1Q9NQ30 184 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 CRNNQ9UBG3 495 aaPredicted RBP5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 AASSQ9UDR5 926 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 CYB5R1Q9UHQ9 305 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 EXOGQ9Y2C4 368 aaKnown RBP5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 RPL36Q9Y3U8 105 aaKnown RBP5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 SLC25A15Q9Y619 301 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 LHFPL6Q9Y693 200 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 HUWE1Q7Z6Z7 4374 aaKnown RBP5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 IRGMA1A4Y4 181 aa5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 TVP23AA6NH52 213 aa5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 ZNF593O00488 134 aaPredicted RBP5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 SELENOFO60613 162 aa5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 IGKV3-15P01624 115 aa5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 IGLV1-44P01699 117 aa5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 CCDC159P0C7I6 412 aa5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 OR2T7P0C7T2 308 aa5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 PIPP12273 146 aaPredicted RBP5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 CBR1P16152 277 aa5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 ZNF32P17041 273 aa5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 NUDT6P53370 316 aa5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 RPS16P62249 146 aaKnown RBP5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 ZNF91Q05481 1191 aa5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 SCRN3Q0VDG4 424 aa5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 MED21Q13503 144 aa5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 PPA1Q15181 289 aa5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 TAB1Q15750 504 aa5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 GSG1Q2KHT4 349 aa5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 KLHL22Q53GT1 634 aa5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 BEX5Q5H9J7 111 aa5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 RBM48Q5RL73 367 aaKnown RBP5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 KRT80Q6KB66 452 aa5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 TMEM53Q6P2H8 277 aa5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 MZT2AQ6P582 158 aa5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 CLEC2AQ6UVW9 174 aa5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 B3GLCTQ6Y288 498 aa5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 DCDC5Q6ZRR9 648 aa5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 SHFQ7M4L6 423 aa5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 EGFL6Q8IUX8 553 aa5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 ERI1Q8IV48 349 aaKnown RBP5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 NANOGP1Q8N7R0 232 aa5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 GJC3Q8NFK1 279 aa5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 OR51G2Q8NGK0 314 aa5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 OR2T27Q8NH04 317 aa5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 OR52N5Q8NH56 324 aa5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 OTOSQ8NHW6 89 aa5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 FGFBP3Q8TAT2 258 aa5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 ST7LQ8TDW4 575 aa5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 SMAP2Q8WU79 429 aaPredicted RBP5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 IPCEF1Q8WWN9 437 aaPredicted RBP5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 MUCL1Q96DR8 90 aa5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 RNFT2Q96EX2 444 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms