RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 NAA20P61599 178 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 HBA1P69905 142 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 SPIBQ01892 262 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 HSF2Q03933 536 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 KHDRBS1Q07666 443 aaKnown RBP eCLIP1.73□□□□□ -2.13
PTCH1-223ENST00000551623 BNIP2Q12982 314 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 PDIA2Q13087 525 aaKnown RBP1.73□□□□□ -2.13
PTCH1-223ENST00000551623 GNA13Q14344 377 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 MAPK11Q15759 364 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 MPPED2Q15777 294 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 KCTD19Q17RG1 926 aaPredicted RBP1.73□□□□□ -2.13
PTCH1-223ENST00000551623 ZNF678Q5SXM1 525 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 LDLRAD2Q5SZI1 272 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 FAM27D1Q5T7N8 215 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 FAM219BQ5XKK7 198 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 FAM91A1Q658Y4 838 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 ZNF770Q6IQ21 691 aaPredicted RBP1.73□□□□□ -2.13
PTCH1-223ENST00000551623 ANKRD26P1Q6NSI1 321 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 CEMP1Q6PRD7 247 aaPredicted RBP1.73□□□□□ -2.13
PTCH1-223ENST00000551623 LRRC74BQ6ZQY2 392 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 RPS27LQ71UM5 84 aaKnown RBP1.73□□□□□ -2.13
PTCH1-223ENST00000551623 C16orf62Q7Z3J2 963 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 SZRD1Q7Z422 152 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 CENPVQ7Z7K6 275 aaPredicted RBP1.73□□□□□ -2.13
PTCH1-223ENST00000551623 MOGAT3Q86VF5 341 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 PDZD9Q8IXQ8 264 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 FAM185AQ8N0U4 392 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 DYNAPQ8N1N2 210 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 CLDN22Q8N7P3 220 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 ICA1LQ8NDH6 482 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 NOXO1Q8NFA2 376 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 OR7A2PQ8NGA2 310 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 OR11H6Q8NGC7 330 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 OR11L1Q8NGX0 322 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 C4orf3Q8WVX3 66 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 ACOT11Q8WXI4 607 aaPredicted RBP1.73□□□□□ -2.13
PTCH1-223ENST00000551623 PTP4A1Q93096 173 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 TAAR8Q969N4 342 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 MAGOHBQ96A72 148 aaKnown RBP1.73□□□□□ -2.13
PTCH1-223ENST00000551623 RASD2Q96D21 266 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 CMBLQ96DG6 245 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 TEX37Q96LM6 180 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 TMEM237Q96Q45 408 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 OR5M11Q96RB7 305 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 NKX3-1Q99801 234 aaPredicted RBP1.73□□□□□ -2.13
PTCH1-223ENST00000551623 MRPL57Q9BQC6 102 aaKnown RBP1.73□□□□□ -2.13
PTCH1-223ENST00000551623 TMEM43Q9BTV4 400 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 EMC6Q9BV81 110 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 ST6GALNAC5Q9BVH7 336 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 TMEM120AQ9BXJ8 343 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 SLC22A4Q9H015 551 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 HEXA-AS1Q9H8Q6 139 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 MTHFD2LQ9H903 347 aaPredicted RBP1.73□□□□□ -2.13
PTCH1-223ENST00000551623 RNF121Q9H920 327 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 MEAF6Q9HAF1 191 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 RNPEPL1Q9HAU8 725 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 RRAGDQ9NQL2 400 aaPredicted RBP1.73□□□□□ -2.13
PTCH1-223ENST00000551623 NANSQ9NR45 359 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 ATAD3AQ9NVI7 634 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 C1orf109Q9NX04 203 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 CPSF2Q9P2I0 782 aaKnown RBP1.73□□□□□ -2.13
PTCH1-223ENST00000551623 ONECUT1Q9UBC0 465 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 A4GNTQ9UNA3 340 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 NOP16Q9Y3C1 178 aaKnown RBP1.73□□□□□ -2.13
PTCH1-223ENST00000551623 POLR3HQ9Y535 204 aaPredicted RBP1.73□□□□□ -2.13
PTCH1-223ENST00000551623 TIMM10BQ9Y5J6 103 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 CAPN7Q9Y6W3 813 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 PKHD1P08F94 4074 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 EXOC1LA0A1B0GW35 172 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 PSMB11A5LHX3 300 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 OR6C6A6NF89 314 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 ZNF726A6NNF4 738 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 F5H5P2 479 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 SLC28A1O00337 649 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 HSPA12AO43301 675 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 GMDSO60547 372 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 SMIM24O75264 130 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 SEC22BO75396 215 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 LYPLA1O75608 230 aaPredicted RBP1.72□□□□□ -2.13
PTCH1-223ENST00000551623 RHBDL1O75783 438 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 OR2F2O95006 317 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 C6orf47O95873 294 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 INHBAP08476 426 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 LAMP1P11279 417 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 NR2C1P13056 603 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 PRG2P13727 222 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 ETFAP13804 333 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 IRF2P14316 349 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 SPNP16150 400 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 ZNF823P16415 610 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 IL7RP16871 459 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 HOXB9P17482 250 aaPredicted RBP1.72□□□□□ -2.13
PTCH1-223ENST00000551623 IMPDH1P20839 514 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 PRPS1L1P21108 318 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 BGNP21810 368 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 C21orf33P30042 268 aaPredicted RBP1.72□□□□□ -2.13
PTCH1-223ENST00000551623 HMOX2P30519 316 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 SSTR1P30872 391 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 HPCAL1P37235 193 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 OR3A4PP47883 348 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms