RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 OR5P2Q8WZ92 322 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 APH1AQ96BI3 265 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 ZMYND19Q96E35 227 aaPredicted RBP1.9□□□□□ -2.11
CPSF6-207ENST00000551516 NEURL3Q96EH8 262 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 OR5B2Q96R09 309 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 OR2M2Q96R28 347 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 OR7D2Q96RA2 312 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 SORT1Q99523 831 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 SLC6A7Q99884 636 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 SSX3Q99909 188 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 CENPKQ9BS16 269 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 MRPL13Q9BYD1 178 aaKnown RBP1.9□□□□□ -2.11
CPSF6-207ENST00000551516 BARHL1Q9BZE3 327 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 DPH5Q9H2P9 285 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 ELOVL6Q9H5J4 265 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 METTL17Q9H7H0 456 aaPredicted RBP1.9□□□□□ -2.11
CPSF6-207ENST00000551516 ZNF665Q9H7R5 613 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 DCLRE1BQ9H816 532 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 MED20Q9H944 212 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 S100A14Q9HCY8 104 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 PLCXD1Q9NUJ7 323 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 ACOXLQ9NUZ1 547 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 DDX18Q9NVP1 670 aaKnown RBP1.9□□□□□ -2.11
CPSF6-207ENST00000551516 FAIMQ9NVQ4 179 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 TREM2Q9NZC2 230 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 NDUFA13Q9P0J0 144 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 TMEM181Q9P2C4 612 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 TMCO1Q9UM00 188 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 OR10H1Q9Y4A9 318 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 UGT2A1Q9Y4X1 527 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 LRP12Q9Y561 859 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 SAR1BQ9Y6B6 198 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 ABCA13Q86UQ4 5058 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 NUP214P35658 2090 aaPredicted RBP1.9□□□□□ -2.11
CPSF6-207ENST00000551516 TMED7-TICAM2A0A0A6YYA0 188 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 LOC100653049A0A140TA62 436 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 ZSCAN5BA6NJL1 495 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 J3QLI3 93 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 hCG_2039718K7EN88 272 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 M0R1B8 84 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 SULT2B1O00204 365 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 GPR171O14626 319 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 RIPK2O43353 540 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 GMFGO60234 142 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 TPST1O60507 370 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 SHOX2O60902 331 aaPredicted RBP1.89□□□□□ -2.11
CPSF6-207ENST00000551516 MRPL33O75394 65 aaKnown RBP1.89□□□□□ -2.11
CPSF6-207ENST00000551516 B3GALNT1O75752 331 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 KRT34O76011 436 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 SUPT7LO94864 414 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 AKR7A3O95154 331 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 NDUFA7O95182 113 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 OR6A2O95222 327 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 SYNGR4O95473 234 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 SNAP29O95721 258 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 PTBP3O95758 552 aaKnown RBP1.89□□□□□ -2.11
CPSF6-207ENST00000551516 C6orf47O95873 294 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 MT-ATP6P00846 226 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 IGHV3-13P01766 116 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 HLA-HP01893 362 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 BGLAPP02818 100 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 SERPINA5P05154 406 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 CD55P08174 381 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 GSTA1P08263 222 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 SNRPAP09012 282 aaKnown RBP1.89□□□□□ -2.11
CPSF6-207ENST00000551516 WNT2P09544 360 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 ALOX5P09917 674 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 LINC00032P0C843 101 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 THRBP10828 461 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 ZNF26P17031 533 aaPredicted RBP1.89□□□□□ -2.11
CPSF6-207ENST00000551516 MDKP21741 143 aaPredicted RBP1.89□□□□□ -2.11
CPSF6-207ENST00000551516 PAX7P23759 505 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 FKBP2P26885 142 aaKnown RBP1.89□□□□□ -2.11
CPSF6-207ENST00000551516 GCKP35557 465 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 OPRL1P41146 370 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 MRPL19P49406 292 aaKnown RBP1.89□□□□□ -2.11
CPSF6-207ENST00000551516 GZMMP51124 257 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 CCR4P51679 360 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 BPIFB3P59826 476 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 PRPS1P60891 318 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 ABCE1P61221 599 aaKnown RBP1.89□□□□□ -2.11
CPSF6-207ENST00000551516 ERVK-16P61578 105 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 BTG1P62324 171 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 HERV-K104P63124 156 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 CAV1Q03135 178 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 MERTKQ12866 999 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 BNIP2Q12982 314 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 GAMTQ14353 236 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 MEF2DQ14814 521 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 MAD2L1BPQ15013 274 aaPredicted RBP1.89□□□□□ -2.11
CPSF6-207ENST00000551516 SYPL1Q16563 259 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 TMEM30BQ3MIR4 351 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 ZFP69Q49AA0 526 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 ADAMTSL4-AS1Q5T5F5 129 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 C9orf135Q5VTT2 229 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 PRAMEF7Q5VXH5 474 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 HCP5Q6MZN7 132 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 C12orf54Q6X4T0 127 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 C6orf120Q7Z4R8 191 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 TSEN54Q7Z6J9 526 aaKnown RBP1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms