RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 FAM107AO95990 144 aa9.54□□□□□ -0.88
PTCH1-222ENST00000551425 TFF1P04155 84 aa9.54□□□□□ -0.88
PTCH1-222ENST00000551425 OTX1P32242 354 aaPredicted RBP9.54□□□□□ -0.88
PTCH1-222ENST00000551425 IFNA8P32881 189 aa9.54□□□□□ -0.88
PTCH1-222ENST00000551425 CDKN2AP42771 156 aaKnown RBP9.54□□□□□ -0.88
PTCH1-222ENST00000551425 THBS3P49746 956 aa9.54□□□□□ -0.88
PTCH1-222ENST00000551425 IL5RAQ01344 420 aa9.54□□□□□ -0.88
PTCH1-222ENST00000551425 NFYCQ13952 458 aa9.54□□□□□ -0.88
PTCH1-222ENST00000551425 SLC36A3Q495N2 470 aa9.54□□□□□ -0.88
PTCH1-222ENST00000551425 AGKQ53H12 422 aa9.54□□□□□ -0.88
PTCH1-222ENST00000551425 PIGWQ7Z7B1 504 aa9.54□□□□□ -0.88
PTCH1-222ENST00000551425 FAM185AQ8N0U4 392 aa9.54□□□□□ -0.88
PTCH1-222ENST00000551425 LNX2Q8N448 690 aa9.54□□□□□ -0.88
PTCH1-222ENST00000551425 CYB561A3Q8NBI2 242 aa9.54□□□□□ -0.88
PTCH1-222ENST00000551425 OR10Z1Q8NGY1 313 aa9.54□□□□□ -0.88
PTCH1-222ENST00000551425 OR2AJ1Q8NGZ0 328 aa9.54□□□□□ -0.88
PTCH1-222ENST00000551425 OR10A6Q8NH74 314 aa9.54□□□□□ -0.88
PTCH1-222ENST00000551425 SPTSSAQ969W0 71 aa9.54□□□□□ -0.88
PTCH1-222ENST00000551425 MALSU1Q96EH3 234 aa9.54□□□□□ -0.88
PTCH1-222ENST00000551425 RCHY1Q96PM5 261 aa9.54□□□□□ -0.88
PTCH1-222ENST00000551425 TBL2Q9Y4P3 447 aaKnown RBP9.54□□□□□ -0.88
PTCH1-222ENST00000551425 SOCS2O14508 198 aa9.53□□□□□ -0.88
PTCH1-222ENST00000551425 CCDC22O60826 627 aa9.53□□□□□ -0.88
PTCH1-222ENST00000551425 TXNDC12O95881 172 aa9.53□□□□□ -0.88
PTCH1-222ENST00000551425 COX7A1P24310 79 aa9.53□□□□□ -0.88
PTCH1-222ENST00000551425 AZGP1P25311 298 aaKnown RBP9.53□□□□□ -0.88
PTCH1-222ENST00000551425 GPR4P46093 362 aa9.53□□□□□ -0.88
PTCH1-222ENST00000551425 SLC25A1P53007 311 aa9.53□□□□□ -0.88
PTCH1-222ENST00000551425 TRAM2Q15035 370 aa9.53□□□□□ -0.88
PTCH1-222ENST00000551425 KHDC1LQ5JSQ8 128 aa9.53□□□□□ -0.88
PTCH1-222ENST00000551425 DRAM2Q6UX65 266 aa9.53□□□□□ -0.88
PTCH1-222ENST00000551425 OFCC1Q8IZS5 231 aa9.53□□□□□ -0.88
PTCH1-222ENST00000551425 OR52H1Q8NGJ2 320 aa9.53□□□□□ -0.88
PTCH1-222ENST00000551425 SPSB4Q96A44 273 aa9.53□□□□□ -0.88
PTCH1-222ENST00000551425 C19orf12Q9NSK7 152 aa9.53□□□□□ -0.88
PTCH1-222ENST00000551425 B9D1Q9UPM9 204 aa9.53□□□□□ -0.88
PTCH1-222ENST00000551425 ARL2BPQ9Y2Y0 163 aa9.53□□□□□ -0.88
PTCH1-222ENST00000551425 CSMD3Q7Z407 3707 aa9.52□□□□□ -0.89
PTCH1-222ENST00000551425 A0A087WUU8 490 aa9.52□□□□□ -0.89
PTCH1-222ENST00000551425 hCG_1809904A0A1W2PP81 198 aa9.52□□□□□ -0.89
PTCH1-222ENST00000551425 A0A1W2PPE2 198 aa9.52□□□□□ -0.89
PTCH1-222ENST00000551425 A0A1W2PPH5 198 aa9.52□□□□□ -0.89
PTCH1-222ENST00000551425 A0A1W2PR64 198 aa9.52□□□□□ -0.89
PTCH1-222ENST00000551425 A0A1W2PRV1 198 aa9.52□□□□□ -0.89
PTCH1-222ENST00000551425 OR2AT4A6NND4 320 aa9.52□□□□□ -0.89
PTCH1-222ENST00000551425 ODF3BA8MYP8 253 aa9.52□□□□□ -0.89
PTCH1-222ENST00000551425 PTP4A3O75365 173 aa9.52□□□□□ -0.89
PTCH1-222ENST00000551425 NDUFB2O95178 105 aa9.52□□□□□ -0.89
PTCH1-222ENST00000551425 IFNA14P01570 189 aa9.52□□□□□ -0.89
PTCH1-222ENST00000551425 GMFBP60983 142 aa9.52□□□□□ -0.89
PTCH1-222ENST00000551425 SSX2Q16385 188 aa9.52□□□□□ -0.89
PTCH1-222ENST00000551425 C10orf99Q6UWK7 81 aa9.52□□□□□ -0.89
PTCH1-222ENST00000551425 MBOAT2Q6ZWT7 520 aa9.52□□□□□ -0.89
PTCH1-222ENST00000551425 OR6V1Q8N148 313 aa9.52□□□□□ -0.89
PTCH1-222ENST00000551425 ZNRF1Q8ND25 227 aa9.52□□□□□ -0.89
PTCH1-222ENST00000551425 BCAS4Q8TDM0 211 aa9.52□□□□□ -0.89
PTCH1-222ENST00000551425 PRR25Q96S07 402 aa9.52□□□□□ -0.89
PTCH1-222ENST00000551425 NLKQ9UBE8 527 aa9.52□□□□□ -0.89
PTCH1-222ENST00000551425 SIGLEC7Q9Y286 467 aa9.52□□□□□ -0.89
PTCH1-222ENST00000551425 IER3IP1Q9Y5U9 82 aa9.52□□□□□ -0.89
PTCH1-222ENST00000551425 PCLOQ9Y6V0 5065 aa9.51□□□□□ -0.89
PTCH1-222ENST00000551425 IGKV1D-17A0A075B6S4 117 aa9.51□□□□□ -0.89
PTCH1-222ENST00000551425 FAM90A22PA8MWA6 464 aa9.51□□□□□ -0.89
PTCH1-222ENST00000551425 H3BUI4 141 aa9.51□□□□□ -0.89
PTCH1-222ENST00000551425 NDUFAB1O14561 156 aa9.51□□□□□ -0.89
PTCH1-222ENST00000551425 XRCC2O43543 280 aa9.51□□□□□ -0.89
PTCH1-222ENST00000551425 NOS3P29474 1203 aa9.51□□□□□ -0.89
PTCH1-222ENST00000551425 MYCNOSP40205 109 aa9.51□□□□□ -0.89
PTCH1-222ENST00000551425 GP2P55259 537 aaKnown RBP9.51□□□□□ -0.89
PTCH1-222ENST00000551425 ERVFRD-1P60508 538 aa9.51□□□□□ -0.89
PTCH1-222ENST00000551425 LDLRAD2Q5SZI1 272 aa9.51□□□□□ -0.89
PTCH1-222ENST00000551425 TMEM200BQ69YZ2 307 aa9.51□□□□□ -0.89
PTCH1-222ENST00000551425 ZNF730Q6ZMV8 503 aa9.51□□□□□ -0.89
PTCH1-222ENST00000551425 DPY19L2P2Q6ZN68 376 aa9.51□□□□□ -0.89
PTCH1-222ENST00000551425 CCDC197Q8NCU1 140 aa9.51□□□□□ -0.89
PTCH1-222ENST00000551425 TMEM185AQ8NFB2 350 aa9.51□□□□□ -0.89
PTCH1-222ENST00000551425 LZICQ8WZA0 190 aa9.51□□□□□ -0.89
PTCH1-222ENST00000551425 P2RX4Q99571 388 aa9.51□□□□□ -0.89
PTCH1-222ENST00000551425 ZNF649Q9BS31 505 aa9.51□□□□□ -0.89
PTCH1-222ENST00000551425 FNDC11Q9BVV2 318 aa9.51□□□□□ -0.89
PTCH1-222ENST00000551425 SRA1Q9HD15 236 aaKnown RBP9.51□□□□□ -0.89
PTCH1-222ENST00000551425 SAR1AQ9NR31 198 aa9.51□□□□□ -0.89
PTCH1-222ENST00000551425 USE1Q9NZ43 259 aa9.51□□□□□ -0.89
PTCH1-222ENST00000551425 RHCGQ9UBD6 479 aa9.51□□□□□ -0.89
PTCH1-222ENST00000551425 KCNG2Q9UJ96 466 aa9.51□□□□□ -0.89
PTCH1-222ENST00000551425 ZNF222Q9UK12 451 aa9.51□□□□□ -0.89
PTCH1-222ENST00000551425 FFAR1O14842 300 aa9.5□□□□□ -0.89
PTCH1-222ENST00000551425 SLC22A2O15244 555 aa9.5□□□□□ -0.89
PTCH1-222ENST00000551425 AKR7A2O43488 359 aa9.5□□□□□ -0.89
PTCH1-222ENST00000551425 DCTN3O75935 186 aa9.5□□□□□ -0.89
PTCH1-222ENST00000551425 ARG1P05089 322 aa9.5□□□□□ -0.89
PTCH1-222ENST00000551425 SLC6A1P30531 599 aa9.5□□□□□ -0.89
PTCH1-222ENST00000551425 GNALP38405 381 aa9.5□□□□□ -0.89
PTCH1-222ENST00000551425 GABRA2P47869 451 aa9.5□□□□□ -0.89
PTCH1-222ENST00000551425 RPS6KA3P51812 740 aa9.5□□□□□ -0.89
PTCH1-222ENST00000551425 RPL31P62899 125 aaKnown RBP9.5□□□□□ -0.89
PTCH1-222ENST00000551425 FAM3AP98173 230 aa9.5□□□□□ -0.89
PTCH1-222ENST00000551425 CYBRD1Q53TN4 286 aa9.5□□□□□ -0.89
PTCH1-222ENST00000551425 ZNF626Q68DY1 528 aa9.5□□□□□ -0.89
PTCH1-222ENST00000551425 ZFAND6Q6FIF0 208 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms