RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 FAM71F1Q96KD3 344 aaPredicted RBP12.92□□□□□ -0.34
PRPF40B-211ENST00000551063 MYCBPQ99417 103 aaPredicted RBP12.92□□□□□ -0.34
PRPF40B-211ENST00000551063 TMEM246Q9BRR3 403 aa12.92□□□□□ -0.34
PRPF40B-211ENST00000551063 MIOXQ9UGB7 285 aa12.92□□□□□ -0.34
PRPF40B-211ENST00000551063 ENPP5Q9UJA9 477 aa12.92□□□□□ -0.34
PRPF40B-211ENST00000551063 LRCH1Q9Y2L9 728 aa12.92□□□□□ -0.34
PRPF40B-211ENST00000551063 POLR3KQ9Y2Y1 108 aaPredicted RBP12.92□□□□□ -0.34
PRPF40B-211ENST00000551063 hCG_1807616A0A1W2PRN6 198 aa12.91□□□□□ -0.34
PRPF40B-211ENST00000551063 J3QLI3 93 aa12.91□□□□□ -0.34
PRPF40B-211ENST00000551063 RPP14O95059 124 aaKnown RBP12.91□□□□□ -0.34
PRPF40B-211ENST00000551063 ZNF205O95201 554 aa12.91□□□□□ -0.34
PRPF40B-211ENST00000551063 SRD5A1P18405 259 aa12.91□□□□□ -0.34
PRPF40B-211ENST00000551063 LRRC36Q1X8D7 754 aa12.91□□□□□ -0.34
PRPF40B-211ENST00000551063 ESCO2Q56NI9 601 aa12.91□□□□□ -0.34
PRPF40B-211ENST00000551063 FAM201AQ5SY85 155 aa12.91□□□□□ -0.34
PRPF40B-211ENST00000551063 TTC23Q5W5X9 447 aa12.91□□□□□ -0.34
PRPF40B-211ENST00000551063 LPCAT4Q643R3 524 aa12.91□□□□□ -0.34
PRPF40B-211ENST00000551063 Q6ZSR3 168 aa12.91□□□□□ -0.34
PRPF40B-211ENST00000551063 ZNF771Q7L3S4 317 aaPredicted RBP12.91□□□□□ -0.34
PRPF40B-211ENST00000551063 DOK3Q7L591 496 aa12.91□□□□□ -0.34
PRPF40B-211ENST00000551063 NLRC3Q7RTR2 1065 aa12.91□□□□□ -0.34
PRPF40B-211ENST00000551063 KCTD20Q7Z5Y7 419 aa12.91□□□□□ -0.34
PRPF40B-211ENST00000551063 THAP5Q7Z6K1 395 aa12.91□□□□□ -0.34
PRPF40B-211ENST00000551063 GCSAMQ8N6F7 178 aa12.91□□□□□ -0.34
PRPF40B-211ENST00000551063 TEX29Q8N6K0 151 aa12.91□□□□□ -0.34
PRPF40B-211ENST00000551063 ACBD7Q8N6N7 88 aa12.91□□□□□ -0.34
PRPF40B-211ENST00000551063 CCDC54Q8NEL0 328 aa12.91□□□□□ -0.34
PRPF40B-211ENST00000551063 APH1BQ8WW43 257 aa12.91□□□□□ -0.34
PRPF40B-211ENST00000551063 TMEM158Q8WZ71 300 aa12.91□□□□□ -0.34
PRPF40B-211ENST00000551063 OR5P3Q8WZ94 311 aa12.91□□□□□ -0.34
PRPF40B-211ENST00000551063 RORBQ92753 470 aa12.91□□□□□ -0.34
PRPF40B-211ENST00000551063 PPP1R14AQ96A00 147 aa12.91□□□□□ -0.34
PRPF40B-211ENST00000551063 MRPL48Q96GC5 212 aaKnown RBP12.91□□□□□ -0.34
PRPF40B-211ENST00000551063 HIST1H2AAQ96QV6 131 aa12.91□□□□□ -0.34
PRPF40B-211ENST00000551063 PPP1R3EQ9H7J1 279 aa12.91□□□□□ -0.34
PRPF40B-211ENST00000551063 ACOXLQ9NUZ1 547 aa12.91□□□□□ -0.34
PRPF40B-211ENST00000551063 AASSQ9UDR5 926 aa12.91□□□□□ -0.34
PRPF40B-211ENST00000551063 V9GYS6 101 aa12.91□□□□□ -0.34
PRPF40B-211ENST00000551063 A0A1B0GTI1 187 aa12.9□□□□□ -0.34
PRPF40B-211ENST00000551063 OOEPA6NGQ2 149 aa12.9□□□□□ -0.34
PRPF40B-211ENST00000551063 OR5B21A6NL26 309 aa12.9□□□□□ -0.34
PRPF40B-211ENST00000551063 FADS2O95864 444 aaKnown RBP12.9□□□□□ -0.34
PRPF40B-211ENST00000551063 LHBP01229 141 aa12.9□□□□□ -0.34
PRPF40B-211ENST00000551063 WNT2P09544 360 aa12.9□□□□□ -0.34
PRPF40B-211ENST00000551063 CFHR2P36980 270 aa12.9□□□□□ -0.34
PRPF40B-211ENST00000551063 ACTA2P62736 377 aa12.9□□□□□ -0.34
PRPF40B-211ENST00000551063 ACTG2P63267 376 aa12.9□□□□□ -0.34
PRPF40B-211ENST00000551063 CSNK2BP67870 215 aa12.9□□□□□ -0.34
PRPF40B-211ENST00000551063 RAB40BQ12829 278 aa12.9□□□□□ -0.34
PRPF40B-211ENST00000551063 TP53I3Q53FA7 332 aa12.9□□□□□ -0.34
PRPF40B-211ENST00000551063 FAM76BQ5HYJ3 339 aa12.9□□□□□ -0.34
PRPF40B-211ENST00000551063 OGFRL1Q5TC84 451 aaPredicted RBP12.9□□□□□ -0.34
PRPF40B-211ENST00000551063 ZNF826PQ6ZT77 177 aa12.9□□□□□ -0.34
PRPF40B-211ENST00000551063 IL17RELQ6ZVW7 336 aa12.9□□□□□ -0.34
PRPF40B-211ENST00000551063 EGFL6Q8IUX8 553 aa12.9□□□□□ -0.34
PRPF40B-211ENST00000551063 C11orf53Q8IXP5 236 aa12.9□□□□□ -0.34
PRPF40B-211ENST00000551063 OR8B3Q8NGG8 313 aa12.9□□□□□ -0.34
PRPF40B-211ENST00000551063 OR10Z1Q8NGY1 313 aa12.9□□□□□ -0.34
PRPF40B-211ENST00000551063 OR14K1Q8NGZ2 314 aa12.9□□□□□ -0.34
PRPF40B-211ENST00000551063 NEIL1Q96FI4 390 aaPredicted RBP12.9□□□□□ -0.34
PRPF40B-211ENST00000551063 OR8B2Q96RD0 313 aa12.9□□□□□ -0.34
PRPF40B-211ENST00000551063 DCLRE1BQ9H816 532 aa12.9□□□□□ -0.34
PRPF40B-211ENST00000551063 INPP5EQ9NRR6 644 aa12.9□□□□□ -0.34
PRPF40B-211ENST00000551063 MRPS18AQ9NVS2 196 aaKnown RBP12.9□□□□□ -0.34
PRPF40B-211ENST00000551063 GNG8Q9UK08 70 aa12.9□□□□□ -0.34
PRPF40B-211ENST00000551063 SLC22A13Q9Y226 551 aa12.9□□□□□ -0.34
PRPF40B-211ENST00000551063 PIGLQ9Y2B2 252 aa12.9□□□□□ -0.34
PRPF40B-211ENST00000551063 RPL36Q9Y3U8 105 aaKnown RBP12.9□□□□□ -0.34
PRPF40B-211ENST00000551063 TRAV38-1A0A0B4J264 116 aa12.89□□□□□ -0.35
PRPF40B-211ENST00000551063 A0A1B0GVI7 797 aa12.89□□□□□ -0.35
PRPF40B-211ENST00000551063 DAPL1A0PJW8 107 aa12.89□□□□□ -0.35
PRPF40B-211ENST00000551063 P2RY10O00398 339 aa12.89□□□□□ -0.35
PRPF40B-211ENST00000551063 NDUFA2O43678 99 aa12.89□□□□□ -0.35
PRPF40B-211ENST00000551063 IGHA1P01876 353 aa12.89□□□□□ -0.35
PRPF40B-211ENST00000551063 UBCP0CG48 685 aaKnown RBP12.89□□□□□ -0.35
PRPF40B-211ENST00000551063 FAHP16930 419 aa12.89□□□□□ -0.35
PRPF40B-211ENST00000551063 ZFP36P26651 326 aaKnown RBP12.89□□□□□ -0.35
PRPF40B-211ENST00000551063 CD80P33681 288 aa12.89□□□□□ -0.35
PRPF40B-211ENST00000551063 THBS2P35442 1172 aa12.89□□□□□ -0.35
PRPF40B-211ENST00000551063 PSMB10P40306 273 aa12.89□□□□□ -0.35
PRPF40B-211ENST00000551063 SEC61A1P61619 476 aaKnown RBP12.89□□□□□ -0.35
PRPF40B-211ENST00000551063 GNG3P63215 75 aa12.89□□□□□ -0.35
PRPF40B-211ENST00000551063 LCN2P80188 198 aa12.89□□□□□ -0.35
PRPF40B-211ENST00000551063 IL18R1Q13478 541 aa12.89□□□□□ -0.35
PRPF40B-211ENST00000551063 WDR38Q5JTN6 314 aa12.89□□□□□ -0.35
PRPF40B-211ENST00000551063 ZNF691Q5VV52 312 aa12.89□□□□□ -0.35
PRPF40B-211ENST00000551063 DCAF12L2Q5VW00 463 aa12.89□□□□□ -0.35
PRPF40B-211ENST00000551063 TEX36Q5VZQ5 186 aa12.89□□□□□ -0.35
PRPF40B-211ENST00000551063 TMEM42Q69YG0 159 aa12.89□□□□□ -0.35
PRPF40B-211ENST00000551063 FAHD2BQ6P2I3 314 aaPredicted RBP12.89□□□□□ -0.35
PRPF40B-211ENST00000551063 WDR82Q6UXN9 313 aa12.89□□□□□ -0.35
PRPF40B-211ENST00000551063 SETD9Q8NE22 299 aa12.89□□□□□ -0.35
PRPF40B-211ENST00000551063 LRRC29Q8WV35 223 aa12.89□□□□□ -0.35
PRPF40B-211ENST00000551063 FAHD2AQ96GK7 314 aa12.89□□□□□ -0.35
PRPF40B-211ENST00000551063 RNF170Q96K19 258 aa12.89□□□□□ -0.35
PRPF40B-211ENST00000551063 SSBP3Q9BWW4 388 aaPredicted RBP12.89□□□□□ -0.35
PRPF40B-211ENST00000551063 FGF23Q9GZV9 251 aaPredicted RBP12.89□□□□□ -0.35
PRPF40B-211ENST00000551063 OR5V1Q9UGF6 321 aa12.89□□□□□ -0.35
PRPF40B-211ENST00000551063 SRRM5B3KS81 715 aa12.88□□□□□ -0.35
PRPF40B-211ENST00000551063 C3orf80F5H4A9 247 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms