RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 CCBE1Q6UXH8 406 aaPredicted RBP10.05□□□□□ -0.8
DDX54-206ENST00000549271 ASRGL1Q7L266 308 aa10.05□□□□□ -0.8
DDX54-206ENST00000549271 AMIGO2Q86SJ2 522 aa10.05□□□□□ -0.8
DDX54-206ENST00000549271 OTOSQ8NHW6 89 aa10.05□□□□□ -0.8
DDX54-206ENST00000549271 DNAJC9Q8WXX5 260 aa10.05□□□□□ -0.8
DDX54-206ENST00000549271 TOR3AQ9H497 397 aa10.05□□□□□ -0.8
DDX54-206ENST00000549271 FN3KRPQ9HA64 309 aa10.05□□□□□ -0.8
DDX54-206ENST00000549271 TVP23BQ9NYZ1 205 aa10.05□□□□□ -0.8
DDX54-206ENST00000549271 RNF7Q9UBF6 113 aa10.05□□□□□ -0.8
DDX54-206ENST00000549271 KLHDC2Q9Y2U9 406 aa10.05□□□□□ -0.8
DDX54-206ENST00000549271 N6AMT1Q9Y5N5 214 aa10.05□□□□□ -0.8
DDX54-206ENST00000549271 CCDC182A6NF36 153 aa10.04□□□□□ -0.8
DDX54-206ENST00000549271 GGT3PA6NGU5 568 aa10.04□□□□□ -0.8
DDX54-206ENST00000549271 G3V2T6 193 aa10.04□□□□□ -0.8
DDX54-206ENST00000549271 XRCC2O43543 280 aa10.04□□□□□ -0.8
DDX54-206ENST00000549271 TSPAN9O75954 239 aa10.04□□□□□ -0.8
DDX54-206ENST00000549271 IGHV4-59P01825 116 aa10.04□□□□□ -0.8
DDX54-206ENST00000549271 ALOX5APP20292 161 aa10.04□□□□□ -0.8
DDX54-206ENST00000549271 FASP25445 335 aa10.04□□□□□ -0.8
DDX54-206ENST00000549271 NAA10P41227 235 aaPredicted RBP10.04□□□□□ -0.8
DDX54-206ENST00000549271 IER3P46695 156 aa10.04□□□□□ -0.8
DDX54-206ENST00000549271 HCCSP53701 268 aa10.04□□□□□ -0.8
DDX54-206ENST00000549271 ZNF121P58317 390 aaPredicted RBP10.04□□□□□ -0.8
DDX54-206ENST00000549271 ESRRGP62508 458 aa10.04□□□□□ -0.8
DDX54-206ENST00000549271 FAM3AP98173 230 aa10.04□□□□□ -0.8
DDX54-206ENST00000549271 APOFQ13790 326 aa10.04□□□□□ -0.8
DDX54-206ENST00000549271 OR8G1Q15617 311 aa10.04□□□□□ -0.8
DDX54-206ENST00000549271 SNAPC1Q16533 368 aa10.04□□□□□ -0.8
DDX54-206ENST00000549271 KLHL12Q53G59 568 aa10.04□□□□□ -0.8
DDX54-206ENST00000549271 SLC35D3Q5M8T2 416 aa10.04□□□□□ -0.8
DDX54-206ENST00000549271 C1orf146Q5VVC0 180 aa10.04□□□□□ -0.8
DDX54-206ENST00000549271 PRAMEF6Q5VXH4 476 aa10.04□□□□□ -0.8
DDX54-206ENST00000549271 KDM4DQ6B0I6 523 aa10.04□□□□□ -0.8
DDX54-206ENST00000549271 FAM57BQ71RH2 274 aa10.04□□□□□ -0.8
DDX54-206ENST00000549271 ZNF454Q8N9F8 522 aa10.04□□□□□ -0.8
DDX54-206ENST00000549271 SPERTQ8NA61 448 aa10.04□□□□□ -0.8
DDX54-206ENST00000549271 OR56B2PQ8NGI1 322 aa10.04□□□□□ -0.8
DDX54-206ENST00000549271 THEM6Q8WUY1 208 aa10.04□□□□□ -0.8
DDX54-206ENST00000549271 LRTOMTQ8WZ04 291 aa10.04□□□□□ -0.8
DDX54-206ENST00000549271 SGCDQ92629 289 aa10.04□□□□□ -0.8
DDX54-206ENST00000549271 TBX15Q96SF7 602 aa10.04□□□□□ -0.8
DDX54-206ENST00000549271 TEAD3Q99594 435 aa10.04□□□□□ -0.8
DDX54-206ENST00000549271 KRTAP17-1Q9BYP8 105 aa10.04□□□□□ -0.8
DDX54-206ENST00000549271 MRPL15Q9P015 296 aaKnown RBP10.04□□□□□ -0.8
DDX54-206ENST00000549271 KIF17Q9P2E2 1029 aa10.04□□□□□ -0.8
DDX54-206ENST00000549271 ERVK-18Q9QC07 812 aa10.04□□□□□ -0.8
DDX54-206ENST00000549271 CTSZQ9UBR2 303 aa10.04□□□□□ -0.8
DDX54-206ENST00000549271 SACSQ9NZJ4 4579 aa10.04□□□□□ -0.8
DDX54-206ENST00000549271 TRAV38-1A0A0B4J264 116 aa10.03□□□□□ -0.8
DDX54-206ENST00000549271 CENPVL3A0A0U1RRI6 287 aa10.03□□□□□ -0.8
DDX54-206ENST00000549271 TBX1O43435 398 aa10.03□□□□□ -0.8
DDX54-206ENST00000549271 PRKYO43930 277 aa10.03□□□□□ -0.8
DDX54-206ENST00000549271 ANXA2P07355 339 aaKnown RBP10.03□□□□□ -0.8
DDX54-206ENST00000549271 LYNP07948 512 aa10.03□□□□□ -0.8
DDX54-206ENST00000549271 H2BFMP0C1H6 154 aa10.03□□□□□ -0.8
DDX54-206ENST00000549271 HSD11B1P28845 292 aa10.03□□□□□ -0.8
DDX54-206ENST00000549271 HOXA4Q00056 320 aaPredicted RBP10.03□□□□□ -0.8
DDX54-206ENST00000549271 EGR3Q06889 387 aa10.03□□□□□ -0.8
DDX54-206ENST00000549271 SLC16A9Q7RTY1 509 aa10.03□□□□□ -0.8
DDX54-206ENST00000549271 BCDIN3DQ7Z5W3 292 aaKnown RBP10.03□□□□□ -0.8
DDX54-206ENST00000549271 LDLRAD3Q86YD5 345 aa10.03□□□□□ -0.8
DDX54-206ENST00000549271 PNLDC1Q8NA58 520 aaKnown RBP10.03□□□□□ -0.8
DDX54-206ENST00000549271 C19orf18Q8NEA5 215 aa10.03□□□□□ -0.8
DDX54-206ENST00000549271 GATAD2BQ8WXI9 593 aa10.03□□□□□ -0.8
DDX54-206ENST00000549271 REEP6Q96HR9 211 aa10.03□□□□□ -0.8
DDX54-206ENST00000549271 DMRTB1Q96MA1 342 aa10.03□□□□□ -0.8
DDX54-206ENST00000549271 WDFY2Q96P53 400 aa10.03□□□□□ -0.8
DDX54-206ENST00000549271 TECTBQ96PL2 329 aa10.03□□□□□ -0.8
DDX54-206ENST00000549271 PCGF1Q9BSM1 259 aa10.03□□□□□ -0.8
DDX54-206ENST00000549271 TEX12Q9BXU0 123 aa10.03□□□□□ -0.8
DDX54-206ENST00000549271 GABARAPL1Q9H0R8 117 aa10.03□□□□□ -0.8
DDX54-206ENST00000549271 OPA3Q9H6K4 179 aa10.03□□□□□ -0.8
DDX54-206ENST00000549271 KRT84Q9NSB2 600 aa10.03□□□□□ -0.8
DDX54-206ENST00000549271 UFSP2Q9NUQ7 469 aa10.03□□□□□ -0.8
DDX54-206ENST00000549271 DNAJC27Q9NZQ0 273 aa10.03□□□□□ -0.8
DDX54-206ENST00000549271 KAAG1Q9UBP8 84 aa10.03□□□□□ -0.8
DDX54-206ENST00000549271 ZNF816-ZNF321PA0A0X1KG74 233 aa10.02□□□□□ -0.81
DDX54-206ENST00000549271 hCG_38984A0A1B0GV85 526 aa10.02□□□□□ -0.81
DDX54-206ENST00000549271 OOEPA6NGQ2 149 aa10.02□□□□□ -0.81
DDX54-206ENST00000549271 ZAR1LA6NP61 321 aa10.02□□□□□ -0.81
DDX54-206ENST00000549271 TOX4O94842 621 aa10.02□□□□□ -0.81
DDX54-206ENST00000549271 ECDO95905 644 aaPredicted RBP10.02□□□□□ -0.81
DDX54-206ENST00000549271 LHBP01229 141 aa10.02□□□□□ -0.81
DDX54-206ENST00000549271 APOC1P02654 83 aa10.02□□□□□ -0.81
DDX54-206ENST00000549271 SFTPBP07988 381 aa10.02□□□□□ -0.81
DDX54-206ENST00000549271 DDOSTP39656 456 aa10.02□□□□□ -0.81
DDX54-206ENST00000549271 GSK3AP49840 483 aa10.02□□□□□ -0.81
DDX54-206ENST00000549271 RPS7P62081 194 aaKnown RBP10.02□□□□□ -0.81
DDX54-206ENST00000549271 COL10A1Q03692 680 aa10.02□□□□□ -0.81
DDX54-206ENST00000549271 HERPUD1Q15011 391 aa10.02□□□□□ -0.81
DDX54-206ENST00000549271 TIGD6Q17RP2 521 aa10.02□□□□□ -0.81
DDX54-206ENST00000549271 SLX4IPQ5VYV7 408 aa10.02□□□□□ -0.81
DDX54-206ENST00000549271 GDPGP1Q6ZNW5 385 aa10.02□□□□□ -0.81
DDX54-206ENST00000549271 OR52H1Q8NGJ2 320 aa10.02□□□□□ -0.81
DDX54-206ENST00000549271 PHF21AQ96BD5 680 aa10.02□□□□□ -0.81
DDX54-206ENST00000549271 ADAT1Q9BUB4 502 aaKnown RBP10.02□□□□□ -0.81
DDX54-206ENST00000549271 YIPF3Q9GZM5 350 aa10.02□□□□□ -0.81
DDX54-206ENST00000549271 SIRPDQ9H106 197 aa10.02□□□□□ -0.81
DDX54-206ENST00000549271 PPP1R3EQ9H7J1 279 aa10.02□□□□□ -0.81
DDX54-206ENST00000549271 SP140LQ9H930 580 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms