RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 LAMA1P25391 3075 aa12.13□□□□□ -0.47
HDAC7-228ENST00000548938 C7orf77A4D0Y5 90 aa12.12□□□□□ -0.47
HDAC7-228ENST00000548938 CRTAPO75718 401 aaPredicted RBP12.12□□□□□ -0.47
HDAC7-228ENST00000548938 PTGER4P35408 488 aa12.12□□□□□ -0.47
HDAC7-228ENST00000548938 OR3A2P47893 321 aa12.12□□□□□ -0.47
HDAC7-228ENST00000548938 IAH1Q2TAA2 248 aaPredicted RBP12.12□□□□□ -0.47
HDAC7-228ENST00000548938 RNF212Q495C1 297 aa12.12□□□□□ -0.47
HDAC7-228ENST00000548938 GKN2Q86XP6 184 aa12.12□□□□□ -0.47
HDAC7-228ENST00000548938 ZNF285Q96NJ3 590 aa12.12□□□□□ -0.47
HDAC7-228ENST00000548938 OCSTAMPQ9BR26 566 aa12.12□□□□□ -0.47
HDAC7-228ENST00000548938 RSRP1Q9BUV0 290 aa12.12□□□□□ -0.47
HDAC7-228ENST00000548938 TINAGQ9UJW2 476 aa12.12□□□□□ -0.47
HDAC7-228ENST00000548938 POMT1Q9Y6A1 747 aa12.12□□□□□ -0.47
HDAC7-228ENST00000548938 K7EPK0 472 aa12.12□□□□□ -0.47
HDAC7-228ENST00000548938 TXNL1O43396 289 aa12.12□□□□□ -0.47
HDAC7-228ENST00000548938 SEMA4FO95754 770 aa12.12□□□□□ -0.47
HDAC7-228ENST00000548938 ACKR3P25106 362 aa12.12□□□□□ -0.47
HDAC7-228ENST00000548938 FCGR2CP31995 323 aa12.12□□□□□ -0.47
HDAC7-228ENST00000548938 HAAOP46952 286 aa12.12□□□□□ -0.47
HDAC7-228ENST00000548938 RABIFP47224 123 aa12.12□□□□□ -0.47
HDAC7-228ENST00000548938 DHPSP49366 369 aaPredicted RBP12.12□□□□□ -0.47
HDAC7-228ENST00000548938 GFERP55789 205 aa12.12□□□□□ -0.47
HDAC7-228ENST00000548938 CSNK2A1P68400 391 aaPredicted RBP12.12□□□□□ -0.47
HDAC7-228ENST00000548938 ABHD12BQ7Z5M8 362 aaPredicted RBP12.12□□□□□ -0.47
HDAC7-228ENST00000548938 PRSS58Q8IYP2 241 aa12.12□□□□□ -0.47
HDAC7-228ENST00000548938 FAM71E2Q8N5Q1 922 aa12.12□□□□□ -0.47
HDAC7-228ENST00000548938 CSNK2A3Q8NEV1 391 aa12.12□□□□□ -0.47
HDAC7-228ENST00000548938 KCNG3Q8TAE7 436 aa12.12□□□□□ -0.47
HDAC7-228ENST00000548938 SCGB3A2Q96PL1 93 aa12.12□□□□□ -0.47
HDAC7-228ENST00000548938 CNTNAP3Q9BZ76 1288 aa12.12□□□□□ -0.47
HDAC7-228ENST00000548938 METTL1Q9UBP6 276 aaKnown RBP12.12□□□□□ -0.47
HDAC7-228ENST00000548938 AMDHD2Q9Y303 409 aa12.12□□□□□ -0.47
HDAC7-228ENST00000548938 TRBV23-1A0A0A0MS06 115 aa12.11□□□□□ -0.47
HDAC7-228ENST00000548938 M0R036 132 aa12.11□□□□□ -0.47
HDAC7-228ENST00000548938 OR8U8P0C7N1 319 aa12.11□□□□□ -0.47
HDAC7-228ENST00000548938 CAPZBP47756 277 aa12.11□□□□□ -0.47
HDAC7-228ENST00000548938 DAP3P51398 398 aaKnown RBP12.11□□□□□ -0.47
HDAC7-228ENST00000548938 SNU13P55769 128 aaKnown RBP12.11□□□□□ -0.47
HDAC7-228ENST00000548938 FZD2Q14332 565 aa12.11□□□□□ -0.47
HDAC7-228ENST00000548938 TTLL10Q6ZVT0 673 aa12.11□□□□□ -0.47
HDAC7-228ENST00000548938 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.11□□□□□ -0.47
HDAC7-228ENST00000548938 GALNTL5Q7Z4T8 443 aa12.11□□□□□ -0.47
HDAC7-228ENST00000548938 WWTR1Q9GZV5 400 aa12.11□□□□□ -0.47
HDAC7-228ENST00000548938 B3GALT5Q9Y2C3 310 aa12.11□□□□□ -0.47
HDAC7-228ENST00000548938 MEMO1Q9Y316 297 aa12.11□□□□□ -0.47
HDAC7-228ENST00000548938 IGKV3D-11A0A0A0MRZ8 115 aa12.11□□□□□ -0.47
HDAC7-228ENST00000548938 IGHV5-51A0A0C4DH38 117 aa12.11□□□□□ -0.47
HDAC7-228ENST00000548938 C2orf72A6NCS6 295 aa12.11□□□□□ -0.47
HDAC7-228ENST00000548938 C10orf142B7Z368 130 aa12.11□□□□□ -0.47
HDAC7-228ENST00000548938 NME2P1O60361 137 aa12.11□□□□□ -0.47
HDAC7-228ENST00000548938 CLN5O75503 358 aa12.11□□□□□ -0.47
HDAC7-228ENST00000548938 HCKP08631 526 aa12.11□□□□□ -0.47
HDAC7-228ENST00000548938 SRFP11831 508 aa12.11□□□□□ -0.47
HDAC7-228ENST00000548938 NQO2P16083 231 aa12.11□□□□□ -0.47
HDAC7-228ENST00000548938 TMEM33P57088 247 aa12.11□□□□□ -0.47
HDAC7-228ENST00000548938 HSF1Q00613 529 aa12.11□□□□□ -0.47
HDAC7-228ENST00000548938 MIDNQ504T8 468 aa12.11□□□□□ -0.47
HDAC7-228ENST00000548938 CLEC9AQ6UXN8 241 aa12.11□□□□□ -0.47
HDAC7-228ENST00000548938 PPP1R3BQ86XI6 285 aa12.11□□□□□ -0.47
HDAC7-228ENST00000548938 EDARADDQ8WWZ3 215 aa12.11□□□□□ -0.47
HDAC7-228ENST00000548938 FAM71F1Q96KD3 344 aaPredicted RBP12.11□□□□□ -0.47
HDAC7-228ENST00000548938 NUDT22Q9BRQ3 303 aa12.11□□□□□ -0.47
HDAC7-228ENST00000548938 OR51M1Q9H341 326 aa12.11□□□□□ -0.47
HDAC7-228ENST00000548938 TMEM265A0A087WTH1 108 aa12.1□□□□□ -0.47
HDAC7-228ENST00000548938 METTL12A8MUP2 240 aa12.1□□□□□ -0.47
HDAC7-228ENST00000548938 TSPAN15O95858 294 aa12.1□□□□□ -0.47
HDAC7-228ENST00000548938 IGHV4-34P06331 123 aa12.1□□□□□ -0.47
HDAC7-228ENST00000548938 THBS4P35443 961 aa12.1□□□□□ -0.47
HDAC7-228ENST00000548938 OR9K2Q8NGE7 335 aa12.1□□□□□ -0.47
HDAC7-228ENST00000548938 OR56B1Q8NGI3 324 aa12.1□□□□□ -0.47
HDAC7-228ENST00000548938 OR5D18Q8NGL1 313 aa12.1□□□□□ -0.47
HDAC7-228ENST00000548938 LYPD6BQ8NI32 183 aa12.1□□□□□ -0.47
HDAC7-228ENST00000548938 ERGIC1Q969X5 290 aa12.1□□□□□ -0.47
HDAC7-228ENST00000548938 TGM7Q96PF1 710 aa12.1□□□□□ -0.47
HDAC7-228ENST00000548938 GPER1Q99527 375 aa12.1□□□□□ -0.47
HDAC7-228ENST00000548938 RGCCQ9H4X1 137 aa12.1□□□□□ -0.47
HDAC7-228ENST00000548938 SPACA1Q9HBV2 294 aa12.1□□□□□ -0.47
HDAC7-228ENST00000548938 STARD10Q9Y365 291 aa12.1□□□□□ -0.47
HDAC7-228ENST00000548938 SLCO1B1Q9Y6L6 691 aa12.1□□□□□ -0.47
HDAC7-228ENST00000548938 SPTY2D1-AS1A0A0U1RR47 76 aa12.1□□□□□ -0.47
HDAC7-228ENST00000548938 FIGNL2A6NMB9 653 aa12.1□□□□□ -0.47
HDAC7-228ENST00000548938 JTBO76095 146 aa12.1□□□□□ -0.47
HDAC7-228ENST00000548938 IGHV2-5P01817 119 aa12.1□□□□□ -0.47
HDAC7-228ENST00000548938 RAB5AP20339 215 aa12.1□□□□□ -0.47
HDAC7-228ENST00000548938 BIDP55957 195 aa12.1□□□□□ -0.47
HDAC7-228ENST00000548938 OR2B8PP59922 312 aa12.1□□□□□ -0.47
HDAC7-228ENST00000548938 TLE3Q04726 772 aa12.1□□□□□ -0.47
HDAC7-228ENST00000548938 ACER2Q5QJU3 275 aa12.1□□□□□ -0.47
HDAC7-228ENST00000548938 H1FNTQ75WM6 255 aaPredicted RBP12.1□□□□□ -0.47
HDAC7-228ENST00000548938 OR8B12Q8NGG6 310 aa12.1□□□□□ -0.47
HDAC7-228ENST00000548938 C5orf34Q96MH7 638 aa12.1□□□□□ -0.47
HDAC7-228ENST00000548938 TAAR9Q96RI9 348 aa12.1□□□□□ -0.47
HDAC7-228ENST00000548938 RAB33BQ9H082 229 aa12.1□□□□□ -0.47
HDAC7-228ENST00000548938 DUSP15Q9H1R2 295 aaPredicted RBP12.1□□□□□ -0.47
HDAC7-228ENST00000548938 GPR84Q9NQS5 396 aa12.1□□□□□ -0.47
HDAC7-228ENST00000548938 ZNF319Q9P2F9 582 aa12.1□□□□□ -0.47
HDAC7-228ENST00000548938 CYP8B1Q9UNU6 501 aa12.1□□□□□ -0.47
HDAC7-228ENST00000548938 MMACHCQ9Y4U1 282 aa12.1□□□□□ -0.47
HDAC7-228ENST00000548938 LSM5Q9Y4Y9 91 aaKnown RBP12.1□□□□□ -0.47
HDAC7-228ENST00000548938 HS3ST3A1Q9Y663 406 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms