RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-205ENST00000548313 RAB43Q86YS6 212 aa1.87□□□□□ -2.11
DEPDC4-205ENST00000548313 RNF10Q8N5U6 811 aaKnown RBP1.87□□□□□ -2.11
DEPDC4-205ENST00000548313 ZCCHC13Q8WW36 166 aaKnown RBP1.87□□□□□ -2.11
DEPDC4-205ENST00000548313 HGDQ93099 445 aa1.87□□□□□ -2.11
DEPDC4-205ENST00000548313 MRPL48Q96GC5 212 aaKnown RBP1.87□□□□□ -2.11
DEPDC4-205ENST00000548313 SNF8Q96H20 258 aa1.87□□□□□ -2.11
DEPDC4-205ENST00000548313 AGMATQ9BSE5 352 aa1.87□□□□□ -2.11
DEPDC4-205ENST00000548313 CLSTN2Q9H4D0 955 aa1.87□□□□□ -2.11
DEPDC4-205ENST00000548313 CD209Q9NNX6 404 aa1.87□□□□□ -2.11
DEPDC4-205ENST00000548313 MYEF2Q9P2K5 600 aaKnown RBP1.87□□□□□ -2.11
DEPDC4-205ENST00000548313 ZNF230Q9UIE0 474 aaPredicted RBP1.87□□□□□ -2.11
DEPDC4-205ENST00000548313 JCADQ9P266 1359 aa1.86□□□□□ -2.11
DEPDC4-205ENST00000548313 TRIM64CA6NLI5 447 aa1.86□□□□□ -2.11
DEPDC4-205ENST00000548313 GOLGA8JA6NMD2 632 aa1.86□□□□□ -2.11
DEPDC4-205ENST00000548313 WRBO00258 174 aa1.86□□□□□ -2.11
DEPDC4-205ENST00000548313 MYL12BO14950 172 aa1.86□□□□□ -2.11
DEPDC4-205ENST00000548313 KRT16P08779 473 aa1.86□□□□□ -2.11
DEPDC4-205ENST00000548313 UBCP0CG48 685 aaKnown RBP1.86□□□□□ -2.11
DEPDC4-205ENST00000548313 GOLGA8HP0CJ92 632 aa1.86□□□□□ -2.11
DEPDC4-205ENST00000548313 INAFM2P0DMQ5 153 aa1.86□□□□□ -2.11
DEPDC4-205ENST00000548313 OR1Q1Q15612 314 aa1.86□□□□□ -2.11
DEPDC4-205ENST00000548313 RPEL1Q2QD12 228 aa1.86□□□□□ -2.11
DEPDC4-205ENST00000548313 TMEM236Q5W0B7 351 aa1.86□□□□□ -2.11
DEPDC4-205ENST00000548313 APOBEC3HQ6NTF7 200 aaKnown RBP1.86□□□□□ -2.11
DEPDC4-205ENST00000548313 ADM2Q7Z4H4 148 aa1.86□□□□□ -2.11
DEPDC4-205ENST00000548313 OR1S1Q8NH92 325 aa1.86□□□□□ -2.11
DEPDC4-205ENST00000548313 SFXN5Q8TD22 340 aa1.86□□□□□ -2.11
DEPDC4-205ENST00000548313 RDH12Q96NR8 316 aa1.86□□□□□ -2.11
DEPDC4-205ENST00000548313 MTG1Q9BT17 334 aaPredicted RBP1.86□□□□□ -2.11
DEPDC4-205ENST00000548313 HEBP1Q9NRV9 189 aa1.86□□□□□ -2.11
DEPDC4-205ENST00000548313 RWDD2AQ9UIY3 292 aa1.86□□□□□ -2.11
DEPDC4-205ENST00000548313 TBC1D24Q9ULP9 559 aa1.86□□□□□ -2.11
DEPDC4-205ENST00000548313 CCL15-CCL14A0A0B4J2E2 113 aa1.85□□□□□ -2.11
DEPDC4-205ENST00000548313 LRRIQ4A6NIV6 560 aa1.85□□□□□ -2.11
DEPDC4-205ENST00000548313 C4orf51C9J302 202 aa1.85□□□□□ -2.11
DEPDC4-205ENST00000548313 CASQ2O14958 399 aaPredicted RBP1.85□□□□□ -2.11
DEPDC4-205ENST00000548313 CCDC22O60826 627 aa1.85□□□□□ -2.11
DEPDC4-205ENST00000548313 FSTL3O95633 263 aa1.85□□□□□ -2.11
DEPDC4-205ENST00000548313 CXCR1P25024 350 aa1.85□□□□□ -2.11
DEPDC4-205ENST00000548313 PRSS3P35030 304 aa1.85□□□□□ -2.11
DEPDC4-205ENST00000548313 TGM4P49221 684 aa1.85□□□□□ -2.11
DEPDC4-205ENST00000548313 TAS2R39P59534 338 aa1.85□□□□□ -2.11
DEPDC4-205ENST00000548313 IHHQ14623 411 aa1.85□□□□□ -2.11
DEPDC4-205ENST00000548313 CCL15Q16663 113 aa1.85□□□□□ -2.11
DEPDC4-205ENST00000548313 FAM104BQ5XKR9 115 aa1.85□□□□□ -2.11
DEPDC4-205ENST00000548313 STEAP4Q687X5 459 aa1.85□□□□□ -2.11
DEPDC4-205ENST00000548313 OR2T5Q6IEZ7 315 aa1.85□□□□□ -2.11
DEPDC4-205ENST00000548313 DAZ4Q86SG3 579 aaKnown RBP1.85□□□□□ -2.11
DEPDC4-205ENST00000548313 WDR31Q8NA23 367 aa1.85□□□□□ -2.11
DEPDC4-205ENST00000548313 OR2T29Q8NH02 315 aa1.85□□□□□ -2.11
DEPDC4-205ENST00000548313 SMARCD1Q96GM5 515 aa1.85□□□□□ -2.11
DEPDC4-205ENST00000548313 FAM19A4Q96LR4 140 aa1.85□□□□□ -2.11
DEPDC4-205ENST00000548313 ALS2CR12Q96Q35 445 aa1.85□□□□□ -2.11
DEPDC4-205ENST00000548313 DEFB129Q9H1M3 183 aa1.85□□□□□ -2.11
DEPDC4-205ENST00000548313 REEP1Q9H902 201 aa1.85□□□□□ -2.11
DEPDC4-205ENST00000548313 FANCEQ9HB96 536 aa1.85□□□□□ -2.11
DEPDC4-205ENST00000548313 LYRM4Q9HD34 91 aa1.85□□□□□ -2.11
DEPDC4-205ENST00000548313 DAZ1Q9NQZ3 744 aaKnown RBP1.85□□□□□ -2.11
DEPDC4-205ENST00000548313 ZC4H2Q9NQZ6 224 aa1.85□□□□□ -2.11
DEPDC4-205ENST00000548313 LOXHD1Q8IVV2 1947 aa1.84□□□□□ -2.11
DEPDC4-205ENST00000548313 RPRD2Q5VT52 1461 aaKnown RBP1.84□□□□□ -2.11
DEPDC4-205ENST00000548313 LINC01619G3V211 115 aa1.84□□□□□ -2.11
DEPDC4-205ENST00000548313 TEX46H3BTG2 121 aa1.84□□□□□ -2.11
DEPDC4-205ENST00000548313 UPK1BO75841 260 aa1.84□□□□□ -2.11
DEPDC4-205ENST00000548313 KLHL2O95198 593 aa1.84□□□□□ -2.11
DEPDC4-205ENST00000548313 IGHV1-46P01743 117 aa1.84□□□□□ -2.11
DEPDC4-205ENST00000548313 THRAP10827 490 aa1.84□□□□□ -2.11
DEPDC4-205ENST00000548313 GALP22466 123 aa1.84□□□□□ -2.11
DEPDC4-205ENST00000548313 IL3RAP26951 378 aa1.84□□□□□ -2.11
DEPDC4-205ENST00000548313 GPR1P46091 355 aa1.84□□□□□ -2.11
DEPDC4-205ENST00000548313 TRDNQ13061 729 aa1.84□□□□□ -2.11
DEPDC4-205ENST00000548313 DNAJC3Q13217 504 aa1.84□□□□□ -2.11
DEPDC4-205ENST00000548313 HCP5Q6MZN7 132 aa1.84□□□□□ -2.11
DEPDC4-205ENST00000548313 BBS7Q8IWZ6 715 aa1.84□□□□□ -2.11
DEPDC4-205ENST00000548313 COMMD1Q8N668 190 aa1.84□□□□□ -2.11
DEPDC4-205ENST00000548313 S100PBPQ96BU1 408 aa1.84□□□□□ -2.11
DEPDC4-205ENST00000548313 CAB39Q9Y376 341 aaPredicted RBP1.84□□□□□ -2.11
DEPDC4-205ENST00000548313 ZNF407Q9C0G0 2248 aa1.84□□□□□ -2.11
DEPDC4-205ENST00000548313 MROH7Q68CQ1 1323 aa1.84□□□□□ -2.12
DEPDC4-205ENST00000548313 FBN1P35555 2871 aaKnown RBP1.83□□□□□ -2.12
DEPDC4-205ENST00000548313 TRAV25A0A0B4J276 109 aa1.83□□□□□ -2.12
DEPDC4-205ENST00000548313 CLDN34H7C241 214 aa1.83□□□□□ -2.12
DEPDC4-205ENST00000548313 SLC19A2O60779 497 aa1.83□□□□□ -2.12
DEPDC4-205ENST00000548313 KRTAP12-3P60328 96 aa1.83□□□□□ -2.12
DEPDC4-205ENST00000548313 KRTAP12-4P60329 112 aa1.83□□□□□ -2.12
DEPDC4-205ENST00000548313 INCA1Q0VD86 236 aa1.83□□□□□ -2.12
DEPDC4-205ENST00000548313 MAPRE2Q15555 327 aa1.83□□□□□ -2.12
DEPDC4-205ENST00000548313 C5orf64Q2M2E5 130 aa1.83□□□□□ -2.12
DEPDC4-205ENST00000548313 DEFB134Q4QY38 66 aa1.83□□□□□ -2.12
DEPDC4-205ENST00000548313 HHATQ5VTY9 493 aa1.83□□□□□ -2.12
DEPDC4-205ENST00000548313 KDM4DQ6B0I6 523 aa1.83□□□□□ -2.12
DEPDC4-205ENST00000548313 SLC30A8Q8IWU4 369 aa1.83□□□□□ -2.12
DEPDC4-205ENST00000548313 INO80EQ8NBZ0 244 aaPredicted RBP1.83□□□□□ -2.12
DEPDC4-205ENST00000548313 OR10Z1Q8NGY1 313 aa1.83□□□□□ -2.12
DEPDC4-205ENST00000548313 YIPF5Q969M3 257 aa1.83□□□□□ -2.12
DEPDC4-205ENST00000548313 SCGB3A2Q96PL1 93 aa1.83□□□□□ -2.12
DEPDC4-205ENST00000548313 MYCBPQ99417 103 aaPredicted RBP1.83□□□□□ -2.12
DEPDC4-205ENST00000548313 NAPGQ99747 312 aaPredicted RBP1.83□□□□□ -2.12
DEPDC4-205ENST00000548313 TBL1XR1Q9BZK7 514 aa1.83□□□□□ -2.12
DEPDC4-205ENST00000548313 PLA2G12AQ9BZM1 189 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms