RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 DNM1P46Q6ZS02 220 aa11.66□□□□□ -0.54
PTCH1-213ENST00000546820 KCTD8Q6ZWB6 473 aa11.66□□□□□ -0.54
PTCH1-213ENST00000546820 TGIF2LYQ8IUE0 185 aa11.66□□□□□ -0.54
PTCH1-213ENST00000546820 SVOPQ8N4V2 548 aa11.66□□□□□ -0.54
PTCH1-213ENST00000546820 WFDC11Q8NEX6 87 aa11.66□□□□□ -0.54
PTCH1-213ENST00000546820 OR5A2Q8NGI9 324 aa11.66□□□□□ -0.54
PTCH1-213ENST00000546820 OR13C3Q8NGS6 347 aa11.66□□□□□ -0.54
PTCH1-213ENST00000546820 OR11L1Q8NGX0 322 aa11.66□□□□□ -0.54
PTCH1-213ENST00000546820 GPR148Q8TDV2 347 aa11.66□□□□□ -0.54
PTCH1-213ENST00000546820 C10orf105Q8TEF2 133 aa11.66□□□□□ -0.54
PTCH1-213ENST00000546820 PP6455Q8WZ26 134 aa11.66□□□□□ -0.54
PTCH1-213ENST00000546820 OR5P3Q8WZ94 311 aa11.66□□□□□ -0.54
PTCH1-213ENST00000546820 HPS1Q92902 700 aa11.66□□□□□ -0.54
PTCH1-213ENST00000546820 FGGYQ96C11 551 aa11.66□□□□□ -0.54
PTCH1-213ENST00000546820 SMIM19Q96E16 107 aa11.66□□□□□ -0.54
PTCH1-213ENST00000546820 TIMD4Q96H15 378 aa11.66□□□□□ -0.54
PTCH1-213ENST00000546820 RNF170Q96K19 258 aa11.66□□□□□ -0.54
PTCH1-213ENST00000546820 TECTBQ96PL2 329 aa11.66□□□□□ -0.54
PTCH1-213ENST00000546820 PDCD1LG2Q9BQ51 273 aa11.66□□□□□ -0.54
PTCH1-213ENST00000546820 NEK6Q9HC98 313 aa11.66□□□□□ -0.54
PTCH1-213ENST00000546820 GCM1Q9NP62 436 aa11.66□□□□□ -0.54
PTCH1-213ENST00000546820 SLC7A11Q9UPY5 501 aa11.66□□□□□ -0.54
PTCH1-213ENST00000546820 ZNF281Q9Y2X9 895 aa11.66□□□□□ -0.54
PTCH1-213ENST00000546820 CCDC168Q8NDH2 2452 aa11.65□□□□□ -0.54
PTCH1-213ENST00000546820 TMEM210A6NLX4 147 aa11.65□□□□□ -0.54
PTCH1-213ENST00000546820 CLDN25C9JDP6 229 aa11.65□□□□□ -0.54
PTCH1-213ENST00000546820 PPIHO43447 177 aaKnown RBP11.65□□□□□ -0.54
PTCH1-213ENST00000546820 PLPP2O43688 288 aa11.65□□□□□ -0.54
PTCH1-213ENST00000546820 GATBO75879 557 aaKnown RBP11.65□□□□□ -0.54
PTCH1-213ENST00000546820 CD1AP06126 327 aa11.65□□□□□ -0.54
PTCH1-213ENST00000546820 CD2P06729 351 aa11.65□□□□□ -0.54
PTCH1-213ENST00000546820 CELP19835 753 aa11.65□□□□□ -0.54
PTCH1-213ENST00000546820 GPR6P46095 362 aaPredicted RBP11.65□□□□□ -0.54
PTCH1-213ENST00000546820 PLCXD3Q63HM9 321 aa11.65□□□□□ -0.54
PTCH1-213ENST00000546820 TMEM42Q69YG0 159 aa11.65□□□□□ -0.54
PTCH1-213ENST00000546820 DMKNQ6E0U4 476 aaPredicted RBP11.65□□□□□ -0.54
PTCH1-213ENST00000546820 KRTAP1-3Q8IUG1 177 aa11.65□□□□□ -0.54
PTCH1-213ENST00000546820 SERPINA12Q8IW75 414 aa11.65□□□□□ -0.54
PTCH1-213ENST00000546820 C1orf87Q8N0U7 546 aa11.65□□□□□ -0.54
PTCH1-213ENST00000546820 OR5D14Q8NGL3 314 aa11.65□□□□□ -0.54
PTCH1-213ENST00000546820 RPS4Y2Q8TD47 263 aa11.65□□□□□ -0.54
PTCH1-213ENST00000546820 TSEN15Q8WW01 171 aaKnown RBP11.65□□□□□ -0.54
PTCH1-213ENST00000546820 SGCDQ92629 289 aa11.65□□□□□ -0.54
PTCH1-213ENST00000546820 GHSRQ92847 366 aa11.65□□□□□ -0.54
PTCH1-213ENST00000546820 RAB1CQ92928 201 aa11.65□□□□□ -0.54
PTCH1-213ENST00000546820 YIPF5Q969M3 257 aa11.65□□□□□ -0.54
PTCH1-213ENST00000546820 ITPKCQ96DU7 683 aa11.65□□□□□ -0.54
PTCH1-213ENST00000546820 ISYNA1Q9NPH2 558 aa11.65□□□□□ -0.54
PTCH1-213ENST00000546820 ZNF275Q9NSD4 429 aaPredicted RBP11.65□□□□□ -0.54
PTCH1-213ENST00000546820 TREM2Q9NZC2 230 aa11.65□□□□□ -0.54
PTCH1-213ENST00000546820 DHDHQ9UQ10 334 aa11.65□□□□□ -0.54
PTCH1-213ENST00000546820 CREBBPQ92793 2442 aa11.64□□□□□ -0.55
PTCH1-213ENST00000546820 LOC100289279A0A1B0GTE1 492 aa11.64□□□□□ -0.55
PTCH1-213ENST00000546820 ANKRD61A6NGH8 418 aa11.64□□□□□ -0.55
PTCH1-213ENST00000546820 A6NIN4 97 aa11.64□□□□□ -0.55
PTCH1-213ENST00000546820 OR5B21A6NL26 309 aa11.64□□□□□ -0.55
PTCH1-213ENST00000546820 A6NLC8 198 aa11.64□□□□□ -0.55
PTCH1-213ENST00000546820 PTBP3O95758 552 aaKnown RBP11.64□□□□□ -0.55
PTCH1-213ENST00000546820 LALBAP00709 142 aa11.64□□□□□ -0.55
PTCH1-213ENST00000546820 OCM2P0CE71 109 aa11.64□□□□□ -0.55
PTCH1-213ENST00000546820 OCMP0CE72 109 aaPredicted RBP11.64□□□□□ -0.55
PTCH1-213ENST00000546820 NR4A2P43354 598 aa11.64□□□□□ -0.55
PTCH1-213ENST00000546820 GNG3P63215 75 aa11.64□□□□□ -0.55
PTCH1-213ENST00000546820 GPR50Q13585 617 aa11.64□□□□□ -0.55
PTCH1-213ENST00000546820 RIN1Q13671 783 aa11.64□□□□□ -0.55
PTCH1-213ENST00000546820 ZNF181Q2M3W8 571 aa11.64□□□□□ -0.55
PTCH1-213ENST00000546820 SPRNQ5BIV9 151 aa11.64□□□□□ -0.55
PTCH1-213ENST00000546820 YIF1BQ5BJH7 314 aa11.64□□□□□ -0.55
PTCH1-213ENST00000546820 CEP78Q5JTW2 689 aa11.64□□□□□ -0.55
PTCH1-213ENST00000546820 XAF1Q6GPH4 301 aa11.64□□□□□ -0.55
PTCH1-213ENST00000546820 MOGAT3Q86VF5 341 aa11.64□□□□□ -0.55
PTCH1-213ENST00000546820 DVL3Q92997 716 aaPredicted RBP11.64□□□□□ -0.55
PTCH1-213ENST00000546820 REG4Q9BYZ8 158 aa11.64□□□□□ -0.55
PTCH1-213ENST00000546820 TMEM106BQ9NUM4 274 aa11.64□□□□□ -0.55
PTCH1-213ENST00000546820 UFSP2Q9NUQ7 469 aa11.64□□□□□ -0.55
PTCH1-213ENST00000546820 LRCH1Q9Y2L9 728 aa11.64□□□□□ -0.55
PTCH1-213ENST00000546820 SIRT4Q9Y6E7 314 aaPredicted RBP11.64□□□□□ -0.55
PTCH1-213ENST00000546820 CHD3Q12873 2000 aaKnown RBP11.64□□□□□ -0.55
PTCH1-213ENST00000546820 IGHV4-30-2A0A087WSY4 118 aa11.63□□□□□ -0.55
PTCH1-213ENST00000546820 IGHV3-64DA0A0J9YX35 117 aa11.63□□□□□ -0.55
PTCH1-213ENST00000546820 ZNF732B4DXR9 585 aa11.63□□□□□ -0.55
PTCH1-213ENST00000546820 RP2O75695 350 aa11.63□□□□□ -0.55
PTCH1-213ENST00000546820 HSMCR30P0CW71 290 aa11.63□□□□□ -0.55
PTCH1-213ENST00000546820 PRKACBP22694 351 aa11.63□□□□□ -0.55
PTCH1-213ENST00000546820 GPM6AP51674 278 aa11.63□□□□□ -0.55
PTCH1-213ENST00000546820 FUT6P51993 359 aa11.63□□□□□ -0.55
PTCH1-213ENST00000546820 CHN2P52757 468 aa11.63□□□□□ -0.55
PTCH1-213ENST00000546820 CNN3Q15417 329 aaKnown RBP11.63□□□□□ -0.55
PTCH1-213ENST00000546820 TBCEQ15813 527 aaPredicted RBP11.63□□□□□ -0.55
PTCH1-213ENST00000546820 KCTD21Q4G0X4 260 aa11.63□□□□□ -0.55
PTCH1-213ENST00000546820 FAM76BQ5HYJ3 339 aa11.63□□□□□ -0.55
PTCH1-213ENST00000546820 PRAMEF6Q5VXH4 476 aa11.63□□□□□ -0.55
PTCH1-213ENST00000546820 UTS2BQ765I0 119 aa11.63□□□□□ -0.55
PTCH1-213ENST00000546820 ZNF573Q86YE8 665 aa11.63□□□□□ -0.55
PTCH1-213ENST00000546820 MS4A15Q8N5U1 240 aa11.63□□□□□ -0.55
PTCH1-213ENST00000546820 ZFP41Q8N8Y5 198 aa11.63□□□□□ -0.55
PTCH1-213ENST00000546820 OR1M1Q8NGA1 313 aa11.63□□□□□ -0.55
PTCH1-213ENST00000546820 OR51A4Q8NGJ6 313 aa11.63□□□□□ -0.55
PTCH1-213ENST00000546820 Q8TCH9 128 aa11.63□□□□□ -0.55
PTCH1-213ENST00000546820 THRSPQ92748 146 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms