RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 PBOV1Q9GZY1 135 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 CXorf56Q9H5V9 222 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 ISG20L2Q9H9L3 353 aaKnown RBP5.4□□□□□ -1.54
PRKDC-211ENST00000546304 BARX1Q9HBU1 254 aaPredicted RBP5.4□□□□□ -1.54
PRKDC-211ENST00000546304 TRIM36Q9NQ86 728 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 CHCHD3Q9NX63 227 aaKnown RBP5.4□□□□□ -1.54
PRKDC-211ENST00000546304 CLEC2DQ9UHP7 191 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 ZNF391Q9UJN7 358 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 PURGQ9UJV8 347 aaKnown RBP5.4□□□□□ -1.54
PRKDC-211ENST00000546304 OR52A1Q9UKL2 312 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 CAB39Q9Y376 341 aaPredicted RBP5.4□□□□□ -1.54
PRKDC-211ENST00000546304 SNX5Q9Y5X3 404 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 LOC107986453A0A1B0GWG9 222 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 PLSCR5A0PG75 271 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 ZSCAN5BA6NJL1 495 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 ACOD1A6NK06 481 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 CD300LBA8K4G0 201 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 IQCF6A8MYZ5 107 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 H7C417 338 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 IGLV3-1P01715 115 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 CD8AP01732 235 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 HTR1AP08908 422 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 SELEP16581 610 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 KITLGP21583 273 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 EEF1B2P24534 225 aaKnown RBP5.39□□□□□ -1.55
PRKDC-211ENST00000546304 DNASE1P24855 282 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 CALRP27797 417 aaKnown RBP5.39□□□□□ -1.55
PRKDC-211ENST00000546304 CDKN1AP38936 164 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 KIR3DL2P43630 455 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 TGM4P49221 684 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 WNT4P56705 351 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 NANOS3P60323 173 aaKnown RBP5.39□□□□□ -1.55
PRKDC-211ENST00000546304 PSG7Q13046 419 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 CDK5R1Q15078 307 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 OR8B8Q15620 311 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 TBCEQ15813 527 aaPredicted RBP5.39□□□□□ -1.55
PRKDC-211ENST00000546304 MST1LQ2TV78 715 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 ALKBH6Q3KRA9 238 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 KCTD21Q4G0X4 260 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 RNLSQ5VYX0 342 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 XAF1Q6GPH4 301 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 OR2T2Q6IF00 324 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 PRSS48Q7RTY5 328 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 EGFL6Q8IUX8 553 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 ELMOD2Q8IZ81 293 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 OR5AS1Q8N127 324 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 PRSS35Q8N3Z0 413 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 NUDT10Q8NFP7 164 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 OR2G2Q8NGZ5 317 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 OR51E1Q8TCB6 317 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 SPRYD4Q8WW59 207 aaPredicted RBP5.39□□□□□ -1.55
PRKDC-211ENST00000546304 GTF3AQ92664 365 aaKnown RBP5.39□□□□□ -1.55
PRKDC-211ENST00000546304 PIGTQ969N2 578 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 HAVCR1Q96D42 359 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 NUDT11Q96G61 164 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 AJUBAQ96IF1 538 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 FAM71F1Q96KD3 344 aaPredicted RBP5.39□□□□□ -1.55
PRKDC-211ENST00000546304 ADAT1Q9BUB4 502 aaKnown RBP5.39□□□□□ -1.55
PRKDC-211ENST00000546304 MND1Q9BWT6 205 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 CDCA4Q9BXL8 241 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 CCDC90BQ9GZT6 254 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 TPK1Q9H3S4 243 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 DUSP21Q9H596 190 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 SMURF1Q9HCE7 757 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 G6PC2Q9NQR9 355 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 GPR84Q9NQS5 396 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 TAAR3PQ9P1P4 343 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 ZNF319Q9P2F9 582 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 ERVK-18Q9QC07 812 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 EDARQ9UNE0 448 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 SLC22A13Q9Y226 551 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 ERGIC3Q9Y282 383 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 ACANP16112 2415 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 ABCA2Q9BZC7 2435 aa5.39□□□□□ -1.55
PRKDC-211ENST00000546304 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.39□□□□□ -1.55
PRKDC-211ENST00000546304 DYSFO75923 2080 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 A0A1B0GVI7 797 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 GGT3PA6NGU5 568 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 TMEM212A6NML5 194 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 OR4C45A6NMZ5 311 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 E9PI62 339 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 OVOL3O00110 214 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 P2RY10O00398 339 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 DHRS3O75911 302 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 NCR1O76036 304 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 LALBAP00709 142 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 ERCC1P07992 297 aaPredicted RBP5.38□□□□□ -1.55
PRKDC-211ENST00000546304 ACHEP22303 614 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 CCL1P22362 96 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 ACKR3P25106 362 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 LIPAP38571 399 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 PTH2RP49190 550 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 ZNF81P51508 661 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 MMP15P51511 669 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 CCR9P51686 369 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 CHN2P52757 468 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 GBX2P52951 348 aaPredicted RBP5.38□□□□□ -1.55
PRKDC-211ENST00000546304 TAS2R43P59537 309 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 FAM3AP98173 230 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 ALKBH1Q13686 389 aaKnown RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms