RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 G3V3Y1 287 aa13.89□□□□□ -0.19
LDLR-204ENST00000545707 DBHP09172 617 aa13.89□□□□□ -0.19
LDLR-204ENST00000545707 PTGFRP43088 359 aa13.89□□□□□ -0.19
LDLR-204ENST00000545707 AFF3P51826 1226 aaKnown RBP13.89□□□□□ -0.19
LDLR-204ENST00000545707 BLOC1S1P78537 153 aa13.89□□□□□ -0.19
LDLR-204ENST00000545707 SLC25A53Q5H9E4 307 aa13.89□□□□□ -0.19
LDLR-204ENST00000545707 DOK3Q7L591 496 aa13.89□□□□□ -0.19
LDLR-204ENST00000545707 RABEPKQ7Z6M1 372 aa13.89□□□□□ -0.19
LDLR-204ENST00000545707 ESX1Q8N693 406 aa13.89□□□□□ -0.19
LDLR-204ENST00000545707 PNLDC1Q8NA58 520 aaKnown RBP13.89□□□□□ -0.19
LDLR-204ENST00000545707 OR5L2Q8NGL0 311 aa13.89□□□□□ -0.19
LDLR-204ENST00000545707 STOML3Q8TAV4 291 aa13.89□□□□□ -0.19
LDLR-204ENST00000545707 RNF138Q8WVD3 245 aa13.89□□□□□ -0.19
LDLR-204ENST00000545707 PIGTQ969N2 578 aa13.89□□□□□ -0.19
LDLR-204ENST00000545707 OXGR1Q96P68 337 aa13.89□□□□□ -0.19
LDLR-204ENST00000545707 RASL10BQ96S79 203 aa13.89□□□□□ -0.19
LDLR-204ENST00000545707 CDC6Q99741 560 aa13.89□□□□□ -0.19
LDLR-204ENST00000545707 NUDT16L1Q9BRJ7 211 aaKnown RBP13.89□□□□□ -0.19
LDLR-204ENST00000545707 URM1Q9BTM9 101 aaKnown RBP13.89□□□□□ -0.19
LDLR-204ENST00000545707 TREM1Q9NP99 234 aa13.89□□□□□ -0.19
LDLR-204ENST00000545707 FSCN3Q9NQT6 498 aa13.89□□□□□ -0.19
LDLR-204ENST00000545707 PURGQ9UJV8 347 aaKnown RBP13.89□□□□□ -0.19
LDLR-204ENST00000545707 ANAPC10Q9UM13 185 aa13.89□□□□□ -0.19
LDLR-204ENST00000545707 MYO7BQ6PIF6 2116 aa13.89□□□□□ -0.19
LDLR-204ENST00000545707 RAB19A4D1S5 217 aa13.89□□□□□ -0.19
LDLR-204ENST00000545707 ZNF205O95201 554 aa13.89□□□□□ -0.19
LDLR-204ENST00000545707 HPNP05981 417 aa13.89□□□□□ -0.19
LDLR-204ENST00000545707 SFTPBP07988 381 aa13.89□□□□□ -0.19
LDLR-204ENST00000545707 FAM157CP0CG43 387 aa13.89□□□□□ -0.19
LDLR-204ENST00000545707 CD79AP11912 226 aa13.89□□□□□ -0.19
LDLR-204ENST00000545707 IL32P24001 234 aa13.89□□□□□ -0.19
LDLR-204ENST00000545707 MSX1P28360 303 aa13.89□□□□□ -0.19
LDLR-204ENST00000545707 SHBQ15464 509 aa13.89□□□□□ -0.19
LDLR-204ENST00000545707 CPNE2Q96FN4 548 aaPredicted RBP13.89□□□□□ -0.19
LDLR-204ENST00000545707 SPSB2Q99619 263 aa13.89□□□□□ -0.19
LDLR-204ENST00000545707 HDHD3Q9BSH5 251 aaPredicted RBP13.89□□□□□ -0.19
LDLR-204ENST00000545707 HRH4Q9H3N8 390 aa13.89□□□□□ -0.19
LDLR-204ENST00000545707 ZNF160Q9HCG1 818 aa13.89□□□□□ -0.19
LDLR-204ENST00000545707 ZNF701Q9NV72 531 aaPredicted RBP13.89□□□□□ -0.19
LDLR-204ENST00000545707 ZNF705EA8MWA4 302 aaPredicted RBP13.88□□□□□ -0.19
LDLR-204ENST00000545707 FCGR2AP12318 317 aa13.88□□□□□ -0.19
LDLR-204ENST00000545707 FPR2P25090 351 aa13.88□□□□□ -0.19
LDLR-204ENST00000545707 CYCSP99999 105 aaKnown RBP13.88□□□□□ -0.19
LDLR-204ENST00000545707 C6orf201Q7Z4U5 140 aa13.88□□□□□ -0.19
LDLR-204ENST00000545707 SSC4DQ8WTU2 575 aa13.88□□□□□ -0.19
LDLR-204ENST00000545707 RNF141Q8WVD5 230 aa13.88□□□□□ -0.19
LDLR-204ENST00000545707 DEFB126Q9BYW3 111 aa13.88□□□□□ -0.19
LDLR-204ENST00000545707 RAB18Q9NP72 206 aa13.88□□□□□ -0.19
LDLR-204ENST00000545707 TMEM100Q9NV29 134 aa13.88□□□□□ -0.19
LDLR-204ENST00000545707 HPF1Q9NWY4 346 aa13.88□□□□□ -0.19
LDLR-204ENST00000545707 PISDQ9UG56 409 aa13.88□□□□□ -0.19
LDLR-204ENST00000545707 A0A1W2PQM1 296 aa13.88□□□□□ -0.19
LDLR-204ENST00000545707 PCP4L1A6NKN8 68 aa13.88□□□□□ -0.19
LDLR-204ENST00000545707 MBTPS2O43462 519 aa13.88□□□□□ -0.19
LDLR-204ENST00000545707 RPS2P15880 293 aaKnown RBP13.88□□□□□ -0.19
LDLR-204ENST00000545707 RCC1P18754 421 aaPredicted RBP13.88□□□□□ -0.19
LDLR-204ENST00000545707 ACY1Q03154 408 aa13.88□□□□□ -0.19
LDLR-204ENST00000545707 HIST3H3Q16695 136 aa13.88□□□□□ -0.19
LDLR-204ENST00000545707 MST1LQ2TV78 715 aa13.88□□□□□ -0.19
LDLR-204ENST00000545707 PRSS54Q6PEW0 395 aa13.88□□□□□ -0.19
LDLR-204ENST00000545707 UQCC3Q6UW78 93 aa13.88□□□□□ -0.19
LDLR-204ENST00000545707 LHFPL1Q86WI0 220 aa13.88□□□□□ -0.19
LDLR-204ENST00000545707 ZNF385AQ96PM9 386 aaKnown RBP13.88□□□□□ -0.19
LDLR-204ENST00000545707 SLC26A1Q9H2B4 701 aa13.88□□□□□ -0.19
LDLR-204ENST00000545707 ZNF581Q9P0T4 197 aa13.88□□□□□ -0.19
LDLR-204ENST00000545707 ZNF629Q9UEG4 869 aaPredicted RBP13.88□□□□□ -0.19
LDLR-204ENST00000545707 OSGIN2Q9Y236 505 aa13.88□□□□□ -0.19
LDLR-204ENST00000545707 CCL1P22362 96 aa13.87□□□□□ -0.19
LDLR-204ENST00000545707 GABRR1P24046 479 aa13.87□□□□□ -0.19
LDLR-204ENST00000545707 CCL7P80098 99 aa13.87□□□□□ -0.19
LDLR-204ENST00000545707 SCRN3Q0VDG4 424 aa13.87□□□□□ -0.19
LDLR-204ENST00000545707 RSPO1Q2MKA7 263 aaPredicted RBP13.87□□□□□ -0.19
LDLR-204ENST00000545707 PEG10Q86TG7 708 aaKnown RBP13.87□□□□□ -0.19
LDLR-204ENST00000545707 SPACA9Q96E40 222 aaPredicted RBP13.87□□□□□ -0.19
LDLR-204ENST00000545707 GNRHR2Q96P88 292 aa13.87□□□□□ -0.19
LDLR-204ENST00000545707 UCN2Q96RP3 112 aa13.87□□□□□ -0.19
LDLR-204ENST00000545707 PECRQ9BY49 303 aa13.87□□□□□ -0.19
LDLR-204ENST00000545707 PMS2P1A4D2B8 440 aa13.86□□□□□ -0.19
LDLR-204ENST00000545707 CEACAM18A8MTB9 384 aa13.86□□□□□ -0.19
LDLR-204ENST00000545707 PNLIPRP3Q17RR3 467 aa13.86□□□□□ -0.19
LDLR-204ENST00000545707 RPL7L1Q6DKI1 246 aaKnown RBP13.86□□□□□ -0.19
LDLR-204ENST00000545707 H3F3CQ6NXT2 135 aa13.86□□□□□ -0.19
LDLR-204ENST00000545707 SVBPQ8N300 66 aa13.86□□□□□ -0.19
LDLR-204ENST00000545707 FAM89BQ8N5H3 189 aa13.86□□□□□ -0.19
LDLR-204ENST00000545707 ARL11Q969Q4 196 aa13.86□□□□□ -0.19
LDLR-204ENST00000545707 ZNF837Q96EG3 531 aaPredicted RBP13.86□□□□□ -0.19
LDLR-204ENST00000545707 MCTS1Q9ULC4 181 aaKnown RBP13.86□□□□□ -0.19
LDLR-204ENST00000545707 AQP7P3A6NL99 342 aa13.86□□□□□ -0.19
LDLR-204ENST00000545707 MASP2O00187 686 aa13.86□□□□□ -0.19
LDLR-204ENST00000545707 AGPAT2O15120 278 aa13.86□□□□□ -0.19
LDLR-204ENST00000545707 SIGLEC6O43699 453 aa13.86□□□□□ -0.19
LDLR-204ENST00000545707 PTGER4P35408 488 aa13.86□□□□□ -0.19
LDLR-204ENST00000545707 ID4P47928 161 aa13.86□□□□□ -0.19
LDLR-204ENST00000545707 NPBWR1P48145 328 aa13.86□□□□□ -0.19
LDLR-204ENST00000545707 CHRFAM7AQ494W8 412 aa13.86□□□□□ -0.19
LDLR-204ENST00000545707 ACTBL2Q562R1 376 aa13.86□□□□□ -0.19
LDLR-204ENST00000545707 OR2A2Q6IF42 318 aa13.86□□□□□ -0.19
LDLR-204ENST00000545707 HAGHLQ6PII5 290 aaPredicted RBP13.86□□□□□ -0.19
LDLR-204ENST00000545707 RBM24Q9BX46 236 aaKnown RBP13.86□□□□□ -0.19
LDLR-204ENST00000545707 RARRES3Q9UL19 164 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms