RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 CFAP45Q9UL16 551 aa2.16□□□□□ -2.06
SNHG1-224ENST00000545688 PCLOQ9Y6V0 5065 aa2.15□□□□□ -2.06
SNHG1-224ENST00000545688 IGKV3D-11A0A0A0MRZ8 115 aa2.15□□□□□ -2.07
SNHG1-224ENST00000545688 TRAV40A0A0B4J280 105 aa2.15□□□□□ -2.07
SNHG1-224ENST00000545688 GLYATL1P3A0A0U1RQE8 302 aa2.15□□□□□ -2.07
SNHG1-224ENST00000545688 H0YGG7 62 aa2.15□□□□□ -2.07
SNHG1-224ENST00000545688 SDHDO14521 159 aa2.15□□□□□ -2.07
SNHG1-224ENST00000545688 NDC80O14777 642 aa2.15□□□□□ -2.07
SNHG1-224ENST00000545688 SHOX2O60902 331 aaPredicted RBP2.15□□□□□ -2.07
SNHG1-224ENST00000545688 ENTPD5O75356 428 aa2.15□□□□□ -2.07
SNHG1-224ENST00000545688 SRP72O76094 671 aaKnown RBP2.15□□□□□ -2.07
SNHG1-224ENST00000545688 NSA2O95478 260 aaKnown RBP2.15□□□□□ -2.07
SNHG1-224ENST00000545688 IGLV2-23P01705 113 aa2.15□□□□□ -2.07
SNHG1-224ENST00000545688 ERGP11308 486 aa2.15□□□□□ -2.07
SNHG1-224ENST00000545688 ATP1B2P14415 290 aaPredicted RBP2.15□□□□□ -2.07
SNHG1-224ENST00000545688 CD9P21926 228 aa2.15□□□□□ -2.07
SNHG1-224ENST00000545688 FGF9P31371 208 aaPredicted RBP2.15□□□□□ -2.07
SNHG1-224ENST00000545688 EWSR1Q01844 656 aaKnown RBP eCLIP2.15□□□□□ -2.07
SNHG1-224ENST00000545688 SLC25A11Q02978 314 aaKnown RBP2.15□□□□□ -2.07
SNHG1-224ENST00000545688 GBE1Q04446 702 aa2.15□□□□□ -2.07
SNHG1-224ENST00000545688 LOXL1Q08397 574 aaPredicted RBP2.15□□□□□ -2.07
SNHG1-224ENST00000545688 PPIDQ08752 370 aaKnown RBP2.15□□□□□ -2.07
SNHG1-224ENST00000545688 RIPK1Q13546 671 aa2.15□□□□□ -2.07
SNHG1-224ENST00000545688 CLEC12BQ2HXU8 276 aa2.15□□□□□ -2.07
SNHG1-224ENST00000545688 TMEM249Q2WGJ8 235 aa2.15□□□□□ -2.07
SNHG1-224ENST00000545688 RFX4Q33E94 735 aa2.15□□□□□ -2.07
SNHG1-224ENST00000545688 SFT2D3Q587I9 215 aa2.15□□□□□ -2.07
SNHG1-224ENST00000545688 CCDC183Q5T5S1 534 aa2.15□□□□□ -2.07
SNHG1-224ENST00000545688 TIGD3Q6B0B8 471 aa2.15□□□□□ -2.07
SNHG1-224ENST00000545688 DNAJC24Q6P3W2 148 aa2.15□□□□□ -2.07
SNHG1-224ENST00000545688 LRRC8BQ6P9F7 803 aa2.15□□□□□ -2.07
SNHG1-224ENST00000545688 FAM151BQ6UXP7 276 aa2.15□□□□□ -2.07
SNHG1-224ENST00000545688 SYT10Q6XYQ8 523 aa2.15□□□□□ -2.07
SNHG1-224ENST00000545688 ERASQ7Z444 233 aa2.15□□□□□ -2.07
SNHG1-224ENST00000545688 NT5DC3Q86UY8 548 aa2.15□□□□□ -2.07
SNHG1-224ENST00000545688 LRP11Q86VZ4 500 aa2.15□□□□□ -2.07
SNHG1-224ENST00000545688 LRRC25Q8N386 305 aaPredicted RBP2.15□□□□□ -2.07
SNHG1-224ENST00000545688 PQLC3Q8N755 202 aa2.15□□□□□ -2.07
SNHG1-224ENST00000545688 OR2M7Q8NG81 312 aa2.15□□□□□ -2.07
SNHG1-224ENST00000545688 OR2L3Q8NG85 312 aa2.15□□□□□ -2.07
SNHG1-224ENST00000545688 OR2A1Q8NGT9 310 aa2.15□□□□□ -2.07
SNHG1-224ENST00000545688 EXOSC8Q96B26 276 aaKnown RBP2.15□□□□□ -2.07
SNHG1-224ENST00000545688 CCL19Q99731 98 aa2.15□□□□□ -2.07
SNHG1-224ENST00000545688 SELENOSQ9BQE4 189 aa2.15□□□□□ -2.07
SNHG1-224ENST00000545688 OSBPL11Q9BXB4 747 aa2.15□□□□□ -2.07
SNHG1-224ENST00000545688 TTTY12Q9BZ98 90 aa2.15□□□□□ -2.07
SNHG1-224ENST00000545688 FOLH1BQ9HBA9 442 aa2.15□□□□□ -2.07
SNHG1-224ENST00000545688 PROK2Q9HC23 129 aa2.15□□□□□ -2.07
SNHG1-224ENST00000545688 WFDC1Q9HC57 220 aa2.15□□□□□ -2.07
SNHG1-224ENST00000545688 PCSK1NQ9UHG2 260 aa2.15□□□□□ -2.07
SNHG1-224ENST00000545688 IKBKGQ9Y6K9 419 aa2.15□□□□□ -2.07
SNHG1-224ENST00000545688 YLPM1P49750 1951 aaKnown RBP2.15□□□□□ -2.07
SNHG1-224ENST00000545688 KIAA1549Q9HCM3 1950 aa2.15□□□□□ -2.07
SNHG1-224ENST00000545688 TENM3Q9P273 2699 aa2.15□□□□□ -2.07
SNHG1-224ENST00000545688 HYDINQ4G0P3 5121 aa2.14□□□□□ -2.07
SNHG1-224ENST00000545688 KCNE1BA0A087WTH5 132 aa2.14□□□□□ -2.07
SNHG1-224ENST00000545688 A0A0U1RQV5 110 aa2.14□□□□□ -2.07
SNHG1-224ENST00000545688 KCNK1O00180 336 aa2.14□□□□□ -2.07
SNHG1-224ENST00000545688 DCTN6O00399 190 aa2.14□□□□□ -2.07
SNHG1-224ENST00000545688 LIN7AO14910 233 aaPredicted RBP2.14□□□□□ -2.07
SNHG1-224ENST00000545688 CDC40O60508 579 aaKnown RBP eCLIP2.14□□□□□ -2.075e-11■□□□□ 11.3
SNHG1-224ENST00000545688 RCBTB2O95199 551 aa2.14□□□□□ -2.07
SNHG1-224ENST00000545688 SOD3P08294 240 aa2.14□□□□□ -2.07
SNHG1-224ENST00000545688 TPSB2P20231 275 aa2.14□□□□□ -2.07
SNHG1-224ENST00000545688 CNR1P21554 472 aa2.14□□□□□ -2.07
SNHG1-224ENST00000545688 IL10P22301 178 aa2.14□□□□□ -2.07
SNHG1-224ENST00000545688 PSMA2P25787 234 aa2.14□□□□□ -2.07
SNHG1-224ENST00000545688 PBLDP30039 288 aaPredicted RBP2.14□□□□□ -2.07
SNHG1-224ENST00000545688 ADRA1AP35348 466 aa2.14□□□□□ -2.07
SNHG1-224ENST00000545688 PTGDSP41222 190 aa2.14□□□□□ -2.07
SNHG1-224ENST00000545688 ASMTP46597 345 aa2.14□□□□□ -2.07
SNHG1-224ENST00000545688 ZNF140P52738 457 aaPredicted RBP2.14□□□□□ -2.07
SNHG1-224ENST00000545688 ATP5J2P56134 94 aa2.14□□□□□ -2.07
SNHG1-224ENST00000545688 CACNG7P62955 275 aa2.14□□□□□ -2.07
SNHG1-224ENST00000545688 GAMTQ14353 236 aa2.14□□□□□ -2.07
SNHG1-224ENST00000545688 KIAA0087Q14695 138 aa2.14□□□□□ -2.07
SNHG1-224ENST00000545688 PDK1Q15118 436 aa2.14□□□□□ -2.07
SNHG1-224ENST00000545688 TPSAB1Q15661 275 aa2.14□□□□□ -2.07
SNHG1-224ENST00000545688 ATP6AP1Q15904 470 aa2.14□□□□□ -2.07
SNHG1-224ENST00000545688 TRIM16LQ309B1 348 aa2.14□□□□□ -2.07
SNHG1-224ENST00000545688 ZNF880Q6PDB4 577 aa2.14□□□□□ -2.07
SNHG1-224ENST00000545688 C12orf54Q6X4T0 127 aa2.14□□□□□ -2.07
SNHG1-224ENST00000545688 C19orf35Q6ZS72 473 aa2.14□□□□□ -2.07
SNHG1-224ENST00000545688 VN1R4Q7Z5H5 301 aa2.14□□□□□ -2.07
SNHG1-224ENST00000545688 PIANPQ8IYJ0 282 aa2.14□□□□□ -2.07
SNHG1-224ENST00000545688 ELMOD2Q8IZ81 293 aa2.14□□□□□ -2.07
SNHG1-224ENST00000545688 CYP4Z2PQ8N1L4 340 aa2.14□□□□□ -2.07
SNHG1-224ENST00000545688 CLDN19Q8N6F1 224 aa2.14□□□□□ -2.07
SNHG1-224ENST00000545688 ZFP90Q8TF47 636 aa2.14□□□□□ -2.07
SNHG1-224ENST00000545688 TSLPQ969D9 159 aa2.14□□□□□ -2.07
SNHG1-224ENST00000545688 TM4SF19Q96DZ7 209 aa2.14□□□□□ -2.07
SNHG1-224ENST00000545688 WFIKKN1Q96NZ8 548 aa2.14□□□□□ -2.07
SNHG1-224ENST00000545688 OLFM3Q96PB7 478 aa2.14□□□□□ -2.07
SNHG1-224ENST00000545688 BEX2Q9BXY8 128 aa2.14□□□□□ -2.07
SNHG1-224ENST00000545688 DRC3Q9H069 523 aa2.14□□□□□ -2.07
SNHG1-224ENST00000545688 SIAEQ9HAT2 523 aa2.14□□□□□ -2.07
SNHG1-224ENST00000545688 PARVAQ9NVD7 372 aa2.14□□□□□ -2.07
SNHG1-224ENST00000545688 QPCTLQ9NXS2 382 aa2.14□□□□□ -2.07
SNHG1-224ENST00000545688 RWDD2AQ9UIY3 292 aa2.14□□□□□ -2.07
SNHG1-224ENST00000545688 B9D1Q9UPM9 204 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms