RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 DOCK11Q5JSL3 2073 aa6.19□□□□□ -1.42
CPSF7-224ENST00000544990 A0A0G2JMP0 313 aa6.19□□□□□ -1.42
CPSF7-224ENST00000544990 IGHV3-64DA0A0J9YX35 117 aa6.19□□□□□ -1.42
CPSF7-224ENST00000544990 A0A0X1KG70 313 aa6.19□□□□□ -1.42
CPSF7-224ENST00000544990 hCG_38984A0A1B0GV85 526 aa6.19□□□□□ -1.42
CPSF7-224ENST00000544990 TMEM269A0A1B0GVZ9 245 aa6.19□□□□□ -1.42
CPSF7-224ENST00000544990 C5orf63A6NC05 138 aa6.19□□□□□ -1.42
CPSF7-224ENST00000544990 ANXA2P2A6NMY6 339 aa6.19□□□□□ -1.42
CPSF7-224ENST00000544990 ZNF670-ZNF695F2Z2N8 137 aa6.19□□□□□ -1.42
CPSF7-224ENST00000544990 H3BNX3 289 aa6.19□□□□□ -1.42
CPSF7-224ENST00000544990 PLPP2O43688 288 aa6.19□□□□□ -1.42
CPSF7-224ENST00000544990 FSTL3O95633 263 aa6.19□□□□□ -1.42
CPSF7-224ENST00000544990 CYB5R3P00387 301 aaPredicted RBP6.19□□□□□ -1.42
CPSF7-224ENST00000544990 ALPLP05186 524 aa6.19□□□□□ -1.42
CPSF7-224ENST00000544990 GATA3P23771 443 aa6.19□□□□□ -1.42
CPSF7-224ENST00000544990 THBS2P35442 1172 aa6.19□□□□□ -1.42
CPSF7-224ENST00000544990 ATP6V1E1P36543 226 aa6.19□□□□□ -1.42
CPSF7-224ENST00000544990 POLR2IP36954 125 aaKnown RBP6.19□□□□□ -1.42
CPSF7-224ENST00000544990 ALDH3A2P51648 485 aa6.19□□□□□ -1.42
CPSF7-224ENST00000544990 HCCSP53701 268 aa6.19□□□□□ -1.42
CPSF7-224ENST00000544990 SCGB2A2Q13296 93 aa6.19□□□□□ -1.42
CPSF7-224ENST00000544990 TMED1Q13445 227 aa6.19□□□□□ -1.42
CPSF7-224ENST00000544990 ZMYND11Q15326 602 aa6.19□□□□□ -1.42
CPSF7-224ENST00000544990 KCNJ8Q15842 424 aa6.19□□□□□ -1.42
CPSF7-224ENST00000544990 ZNF829Q3KNS6 432 aaPredicted RBP6.19□□□□□ -1.42
CPSF7-224ENST00000544990 FAHD2BQ6P2I3 314 aaPredicted RBP6.19□□□□□ -1.42
CPSF7-224ENST00000544990 BCDIN3DQ7Z5W3 292 aaKnown RBP6.19□□□□□ -1.42
CPSF7-224ENST00000544990 SLC35F2Q8IXU6 374 aa6.19□□□□□ -1.42
CPSF7-224ENST00000544990 OR4M2Q8NGB6 313 aa6.19□□□□□ -1.42
CPSF7-224ENST00000544990 OR51G2Q8NGK0 314 aa6.19□□□□□ -1.42
CPSF7-224ENST00000544990 Q8TCH9 128 aa6.19□□□□□ -1.42
CPSF7-224ENST00000544990 STMN2Q93045 179 aa6.19□□□□□ -1.42
CPSF7-224ENST00000544990 FAHD2AQ96GK7 314 aa6.19□□□□□ -1.42
CPSF7-224ENST00000544990 OR8B4Q96RC9 309 aa6.19□□□□□ -1.42
CPSF7-224ENST00000544990 C9orf16Q9BUW7 83 aa6.19□□□□□ -1.42
CPSF7-224ENST00000544990 S100A14Q9HCY8 104 aa6.19□□□□□ -1.42
CPSF7-224ENST00000544990 ABCB9Q9NP78 766 aa6.19□□□□□ -1.42
CPSF7-224ENST00000544990 UFSP2Q9NUQ7 469 aa6.19□□□□□ -1.42
CPSF7-224ENST00000544990 CLN6Q9NWW5 311 aa6.19□□□□□ -1.42
CPSF7-224ENST00000544990 IMPAD1Q9NX62 359 aa6.19□□□□□ -1.42
CPSF7-224ENST00000544990 DCAF16Q9NXF7 216 aa6.19□□□□□ -1.42
CPSF7-224ENST00000544990 USE1Q9NZ43 259 aa6.19□□□□□ -1.42
CPSF7-224ENST00000544990 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.19□□□□□ -1.42
CPSF7-224ENST00000544990 RNF7Q9UBF6 113 aa6.19□□□□□ -1.42
CPSF7-224ENST00000544990 MIOXQ9UGB7 285 aa6.19□□□□□ -1.42
CPSF7-224ENST00000544990 IKZF2Q9UKS7 526 aa6.19□□□□□ -1.42
CPSF7-224ENST00000544990 KLHDC2Q9Y2U9 406 aa6.19□□□□□ -1.42
CPSF7-224ENST00000544990 PPIAL4CA0A0B4J2A2 164 aa6.18□□□□□ -1.42
CPSF7-224ENST00000544990 A0A0U1RQV5 110 aa6.18□□□□□ -1.42
CPSF7-224ENST00000544990 A6NLC8 198 aa6.18□□□□□ -1.42
CPSF7-224ENST00000544990 SNTNA6NMZ2 147 aa6.18□□□□□ -1.42
CPSF7-224ENST00000544990 J3QLI3 93 aa6.18□□□□□ -1.42
CPSF7-224ENST00000544990 M0R129 80 aa6.18□□□□□ -1.42
CPSF7-224ENST00000544990 PSMD9O00233 223 aa6.18□□□□□ -1.42
CPSF7-224ENST00000544990 EI24O14681 340 aa6.18□□□□□ -1.42
CPSF7-224ENST00000544990 FAM20BO75063 409 aa6.18□□□□□ -1.42
CPSF7-224ENST00000544990 MTRF1O75570 445 aaKnown RBP6.18□□□□□ -1.42
CPSF7-224ENST00000544990 PTBP3O95758 552 aaKnown RBP6.18□□□□□ -1.42
CPSF7-224ENST00000544990 PNPP00491 289 aa6.18□□□□□ -1.42
CPSF7-224ENST00000544990 GRPP07492 148 aa6.18□□□□□ -1.42
CPSF7-224ENST00000544990 OR2T7P0C7T2 308 aa6.18□□□□□ -1.42
CPSF7-224ENST00000544990 ATP6V1B1P15313 513 aa6.18□□□□□ -1.42
CPSF7-224ENST00000544990 ANOS1P23352 680 aa6.18□□□□□ -1.42
CPSF7-224ENST00000544990 HTR1FP30939 366 aa6.18□□□□□ -1.42
CPSF7-224ENST00000544990 CXCR4P61073 352 aa6.18□□□□□ -1.42
CPSF7-224ENST00000544990 IL5RAQ01344 420 aa6.18□□□□□ -1.42
CPSF7-224ENST00000544990 OR8B8Q15620 311 aa6.18□□□□□ -1.42
CPSF7-224ENST00000544990 MPPED2Q15777 294 aa6.18□□□□□ -1.42
CPSF7-224ENST00000544990 ZIK1Q3SY52 487 aaPredicted RBP6.18□□□□□ -1.42
CPSF7-224ENST00000544990 ESCO2Q56NI9 601 aa6.18□□□□□ -1.42
CPSF7-224ENST00000544990 DCAF12L2Q5VW00 463 aa6.18□□□□□ -1.42
CPSF7-224ENST00000544990 PRAMEF6Q5VXH4 476 aa6.18□□□□□ -1.42
CPSF7-224ENST00000544990 MEDAGQ5VYS4 303 aa6.18□□□□□ -1.42
CPSF7-224ENST00000544990 ZNF322Q6U7Q0 402 aaPredicted RBP6.18□□□□□ -1.42
CPSF7-224ENST00000544990 ZBTB49Q6ZSB9 765 aa6.18□□□□□ -1.42
CPSF7-224ENST00000544990 IL17RELQ6ZVW7 336 aa6.18□□□□□ -1.42
CPSF7-224ENST00000544990 ZNF771Q7L3S4 317 aaPredicted RBP6.18□□□□□ -1.42
CPSF7-224ENST00000544990 COMMD2Q86X83 199 aa6.18□□□□□ -1.42
CPSF7-224ENST00000544990 PQLC1Q8N2U9 271 aa6.18□□□□□ -1.42
CPSF7-224ENST00000544990 CBR4Q8N4T8 237 aa6.18□□□□□ -1.42
CPSF7-224ENST00000544990 OR8B12Q8NGG6 310 aa6.18□□□□□ -1.42
CPSF7-224ENST00000544990 OR2T27Q8NH04 317 aa6.18□□□□□ -1.42
CPSF7-224ENST00000544990 FAM81AQ8TBF8 368 aa6.18□□□□□ -1.42
CPSF7-224ENST00000544990 EME1Q96AY2 570 aa6.18□□□□□ -1.42
CPSF7-224ENST00000544990 HIST1H2AAQ96QV6 131 aa6.18□□□□□ -1.42
CPSF7-224ENST00000544990 MICU1Q9BPX6 476 aa6.18□□□□□ -1.42
CPSF7-224ENST00000544990 PAPOLGQ9BWT3 736 aaKnown RBP6.18□□□□□ -1.42
CPSF7-224ENST00000544990 ADGRL4Q9HBW9 690 aa6.18□□□□□ -1.42
CPSF7-224ENST00000544990 TMEM165Q9HC07 324 aa6.18□□□□□ -1.42
CPSF7-224ENST00000544990 TRIM36Q9NQ86 728 aa6.18□□□□□ -1.42
CPSF7-224ENST00000544990 G6PC2Q9NQR9 355 aa6.18□□□□□ -1.42
CPSF7-224ENST00000544990 ZNF319Q9P2F9 582 aa6.18□□□□□ -1.42
CPSF7-224ENST00000544990 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.18□□□□□ -1.42
CPSF7-224ENST00000544990 COPS3Q9UNS2 423 aa6.18□□□□□ -1.42
CPSF7-224ENST00000544990 LRCH1Q9Y2L9 728 aa6.18□□□□□ -1.42
CPSF7-224ENST00000544990 MPC1Q9Y5U8 109 aa6.18□□□□□ -1.42
CPSF7-224ENST00000544990 WNK2Q9Y3S1 2297 aa6.17□□□□□ -1.42
CPSF7-224ENST00000544990 TRAV38-1A0A0B4J264 116 aa6.17□□□□□ -1.42
CPSF7-224ENST00000544990 hCG_1807616A0A1W2PRN6 198 aa6.17□□□□□ -1.42
CPSF7-224ENST00000544990 CEACAM18A8MTB9 384 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms