RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 CSPG4Q6UVK1 2322 aa8.17□□□□□ -1.1
YBX3-215ENST00000544504 ANKRD61A6NGH8 418 aa8.17□□□□□ -1.1
YBX3-215ENST00000544504 ANXA2P2A6NMY6 339 aa8.17□□□□□ -1.1
YBX3-215ENST00000544504 CD300LBA8K4G0 201 aa8.17□□□□□ -1.1
YBX3-215ENST00000544504 ABCD4O14678 606 aa8.17□□□□□ -1.1
YBX3-215ENST00000544504 CDRT1O95170 752 aa8.17□□□□□ -1.1
YBX3-215ENST00000544504 ALDOBP05062 364 aa8.17□□□□□ -1.1
YBX3-215ENST00000544504 KITLGP21583 273 aa8.17□□□□□ -1.1
YBX3-215ENST00000544504 CALCRP30988 508 aa8.17□□□□□ -1.1
YBX3-215ENST00000544504 SDC2P34741 201 aa8.17□□□□□ -1.1
YBX3-215ENST00000544504 RORCP51449 518 aa8.17□□□□□ -1.1
YBX3-215ENST00000544504 NKX6-1P78426 367 aaPredicted RBP8.17□□□□□ -1.1
YBX3-215ENST00000544504 BSPH1Q075Z2 132 aa8.17□□□□□ -1.1
YBX3-215ENST00000544504 MZT1Q08AG7 82 aa8.17□□□□□ -1.1
YBX3-215ENST00000544504 INSL4Q14641 139 aa8.17□□□□□ -1.1
YBX3-215ENST00000544504 SPCS2Q15005 226 aa8.17□□□□□ -1.1
YBX3-215ENST00000544504 NCMAPQ5T1S8 102 aa8.17□□□□□ -1.1
YBX3-215ENST00000544504 MBNL2Q5VZF2 373 aaKnown RBP8.17□□□□□ -1.1
YBX3-215ENST00000544504 KRT74Q7RTS7 529 aa8.17□□□□□ -1.1
YBX3-215ENST00000544504 OR1M1Q8NGA1 313 aa8.17□□□□□ -1.1
YBX3-215ENST00000544504 SLC25A40Q8TBP6 338 aa8.17□□□□□ -1.1
YBX3-215ENST00000544504 KLF14Q8TD94 323 aaPredicted RBP8.17□□□□□ -1.1
YBX3-215ENST00000544504 SPSB1Q96BD6 273 aa8.17□□□□□ -1.1
YBX3-215ENST00000544504 CMBLQ96DG6 245 aa8.17□□□□□ -1.1
YBX3-215ENST00000544504 TRMT61AQ96FX7 289 aaKnown RBP8.17□□□□□ -1.1
YBX3-215ENST00000544504 MARS2Q96GW9 593 aaKnown RBP8.17□□□□□ -1.1
YBX3-215ENST00000544504 HIST1H2AAQ96QV6 131 aa8.17□□□□□ -1.1
YBX3-215ENST00000544504 OR2J1Q9GZK6 312 aa8.17□□□□□ -1.1
YBX3-215ENST00000544504 CLEC4MQ9H2X3 399 aaPredicted RBP8.17□□□□□ -1.1
YBX3-215ENST00000544504 OR51B6Q9H340 312 aa8.17□□□□□ -1.1
YBX3-215ENST00000544504 LIME1Q9H400 295 aa8.17□□□□□ -1.1
YBX3-215ENST00000544504 ZNF442Q9H7R0 627 aa8.17□□□□□ -1.1
YBX3-215ENST00000544504 PTTG2Q9NZH5 202 aa8.17□□□□□ -1.1
YBX3-215ENST00000544504 MRPL15Q9P015 296 aaKnown RBP8.17□□□□□ -1.1
YBX3-215ENST00000544504 CCDC59Q9P031 241 aaKnown RBP8.17□□□□□ -1.1
YBX3-215ENST00000544504 FBXO9Q9UK97 447 aaPredicted RBP8.17□□□□□ -1.1
YBX3-215ENST00000544504 POU2F3Q9UKI9 436 aa8.17□□□□□ -1.1
YBX3-215ENST00000544504 SLC7A11Q9UPY5 501 aa8.17□□□□□ -1.1
YBX3-215ENST00000544504 CMAHPQ9Y471 501 aa8.17□□□□□ -1.1
YBX3-215ENST00000544504 A3GALT2U3KPV4 340 aa8.17□□□□□ -1.1
YBX3-215ENST00000544504 ATRQ13535 2644 aa8.17□□□□□ -1.1
YBX3-215ENST00000544504 HRNRQ86YZ3 2850 aaPredicted RBP8.17□□□□□ -1.1
YBX3-215ENST00000544504 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.16□□□□□ -1.1
YBX3-215ENST00000544504 A0A1W2PPW3 197 aa8.16□□□□□ -1.1
YBX3-215ENST00000544504 DPRXA6NFQ7 191 aa8.16□□□□□ -1.1
YBX3-215ENST00000544504 NOTOA8MTQ0 251 aa8.16□□□□□ -1.1
YBX3-215ENST00000544504 IQCF6A8MYZ5 107 aa8.16□□□□□ -1.1
YBX3-215ENST00000544504 PIN1P1O15428 100 aa8.16□□□□□ -1.1
YBX3-215ENST00000544504 SULT1B1O43704 296 aa8.16□□□□□ -1.1
YBX3-215ENST00000544504 CST4P01036 141 aa8.16□□□□□ -1.1
YBX3-215ENST00000544504 NRASP01111 189 aa8.16□□□□□ -1.1
YBX3-215ENST00000544504 ZNF250P15622 560 aa8.16□□□□□ -1.1
YBX3-215ENST00000544504 FAHP16930 419 aa8.16□□□□□ -1.1
YBX3-215ENST00000544504 ZNF182P17025 639 aaPredicted RBP8.16□□□□□ -1.1
YBX3-215ENST00000544504 IGFBP3P17936 291 aaPredicted RBP8.16□□□□□ -1.1
YBX3-215ENST00000544504 BDKRB2P30411 391 aa8.16□□□□□ -1.1
YBX3-215ENST00000544504 KLF3P57682 345 aaPredicted RBP8.16□□□□□ -1.1
YBX3-215ENST00000544504 MXD1Q05195 221 aa8.16□□□□□ -1.1
YBX3-215ENST00000544504 DYNC1I2Q13409 638 aaKnown RBP8.16□□□□□ -1.1
YBX3-215ENST00000544504 CNPY1Q3B7I2 92 aa8.16□□□□□ -1.1
YBX3-215ENST00000544504 FAM27D1Q5T7N8 215 aa8.16□□□□□ -1.1
YBX3-215ENST00000544504 GLT8D1Q68CQ7 371 aa8.16□□□□□ -1.1
YBX3-215ENST00000544504 TMEM42Q69YG0 159 aa8.16□□□□□ -1.1
YBX3-215ENST00000544504 ZNF529Q6P280 563 aa8.16□□□□□ -1.1
YBX3-215ENST00000544504 SPERTQ8NA61 448 aa8.16□□□□□ -1.1
YBX3-215ENST00000544504 DNAAF1Q8NEP3 725 aa8.16□□□□□ -1.1
YBX3-215ENST00000544504 WFDC11Q8NEX6 87 aa8.16□□□□□ -1.1
YBX3-215ENST00000544504 OR56B2PQ8NGI1 322 aa8.16□□□□□ -1.1
YBX3-215ENST00000544504 LINC01560Q8TB33 94 aa8.16□□□□□ -1.1
YBX3-215ENST00000544504 NDNFQ8TB73 568 aa8.16□□□□□ -1.1
YBX3-215ENST00000544504 SYNPRQ8TBG9 265 aa8.16□□□□□ -1.1
YBX3-215ENST00000544504 DYNC2LI1Q8TCX1 351 aa8.16□□□□□ -1.1
YBX3-215ENST00000544504 ACOT12Q8WYK0 555 aa8.16□□□□□ -1.1
YBX3-215ENST00000544504 SLC25A46Q96AG3 418 aa8.16□□□□□ -1.1
YBX3-215ENST00000544504 KCTD12Q96CX2 325 aaKnown RBP8.16□□□□□ -1.1
YBX3-215ENST00000544504 ADAT3Q96EY9 351 aaPredicted RBP8.16□□□□□ -1.1
YBX3-215ENST00000544504 PLPPR2Q96GM1 343 aa8.16□□□□□ -1.1
YBX3-215ENST00000544504 CYSLTR2Q9NS75 346 aa8.16□□□□□ -1.1
YBX3-215ENST00000544504 TAS2R4Q9NYW5 299 aa8.16□□□□□ -1.1
YBX3-215ENST00000544504 PURGQ9UJV8 347 aaKnown RBP8.16□□□□□ -1.1
YBX3-215ENST00000544504 PLEKHA6Q9Y2H5 1048 aa8.16□□□□□ -1.1
YBX3-215ENST00000544504 RNF115Q9Y4L5 304 aa8.16□□□□□ -1.1
YBX3-215ENST00000544504 ATP23Q9Y6H3 246 aa8.16□□□□□ -1.1
YBX3-215ENST00000544504 V9GY05 133 aa8.16□□□□□ -1.1
YBX3-215ENST00000544504 FN1P02751 2386 aaKnown RBP8.15□□□□□ -1.1
YBX3-215ENST00000544504 RTTNQ86VV8 2226 aa8.15□□□□□ -1.1
YBX3-215ENST00000544504 TRAV8-7A0A075B6U6 113 aa8.15□□□□□ -1.1
YBX3-215ENST00000544504 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.15□□□□□ -1.1
YBX3-215ENST00000544504 A0A1W2PPK0 400 aa8.15□□□□□ -1.1
YBX3-215ENST00000544504 PLSCR5A0PG75 271 aa8.15□□□□□ -1.1
YBX3-215ENST00000544504 C5orf63A6NC05 138 aa8.15□□□□□ -1.1
YBX3-215ENST00000544504 OR5B21A6NL26 309 aa8.15□□□□□ -1.1
YBX3-215ENST00000544504 ATP6V1G2-DDX39BF2Z307 99 aa8.15□□□□□ -1.1
YBX3-215ENST00000544504 H3BSH0 61 aa8.15□□□□□ -1.1
YBX3-215ENST00000544504 TIMM8AO60220 97 aaPredicted RBP8.15□□□□□ -1.1
YBX3-215ENST00000544504 GMDSO60547 372 aa8.15□□□□□ -1.1
YBX3-215ENST00000544504 IGHV3-13P01766 116 aa8.15□□□□□ -1.1
YBX3-215ENST00000544504 HCKP08631 526 aa8.15□□□□□ -1.1
YBX3-215ENST00000544504 ATF1P18846 271 aa8.15□□□□□ -1.1
YBX3-215ENST00000544504 ACKR3P25106 362 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms