RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 ETFDHQ16134 617 aa11.45□□□□□ -0.58
CHD4-211ENST00000544484 SP6Q3SY56 376 aa11.45□□□□□ -0.58
CHD4-211ENST00000544484 FAM74A1Q5RGS3 127 aa11.45□□□□□ -0.58
CHD4-211ENST00000544484 HES3Q5TGS1 186 aa11.45□□□□□ -0.58
CHD4-211ENST00000544484 OR10P1Q8NGE3 313 aa11.45□□□□□ -0.58
CHD4-211ENST00000544484 PPP1R1CQ8WVI7 109 aa11.45□□□□□ -0.58
CHD4-211ENST00000544484 EXTL1Q92935 676 aa11.45□□□□□ -0.58
CHD4-211ENST00000544484 ADGRL4Q9HBW9 690 aa11.45□□□□□ -0.58
CHD4-211ENST00000544484 ZFP64Q9NPA5 681 aa11.45□□□□□ -0.58
CHD4-211ENST00000544484 LIN7CQ9NUP9 197 aaKnown RBP11.45□□□□□ -0.58
CHD4-211ENST00000544484 JTBO76095 146 aa11.45□□□□□ -0.58
CHD4-211ENST00000544484 CTLA4P16410 223 aa11.45□□□□□ -0.58
CHD4-211ENST00000544484 HNF1AP20823 631 aa11.45□□□□□ -0.58
CHD4-211ENST00000544484 RTL8BQ17RB0 113 aa11.45□□□□□ -0.58
CHD4-211ENST00000544484 TMEM41BQ5BJD5 291 aa11.45□□□□□ -0.58
CHD4-211ENST00000544484 ADAM5Q6NVV9 412 aa11.45□□□□□ -0.58
CHD4-211ENST00000544484 FAM122BQ7Z309 247 aa11.45□□□□□ -0.58
CHD4-211ENST00000544484 ABI3BPQ7Z7G0 1075 aa11.45□□□□□ -0.58
CHD4-211ENST00000544484 LYG2Q86SG7 212 aa11.45□□□□□ -0.58
CHD4-211ENST00000544484 C17orf47Q8NEP4 570 aa11.45□□□□□ -0.58
CHD4-211ENST00000544484 SLIRPQ9GZT3 109 aaKnown RBP11.45□□□□□ -0.58
CHD4-211ENST00000544484 MTCH2Q9Y6C9 303 aa11.45□□□□□ -0.58
CHD4-211ENST00000544484 OR5H15A6NDH6 313 aa11.45□□□□□ -0.58
CHD4-211ENST00000544484 KIR2DL1P43626 348 aaPredicted RBP11.45□□□□□ -0.58
CHD4-211ENST00000544484 TRIP6Q15654 476 aaKnown RBP11.45□□□□□ -0.58
CHD4-211ENST00000544484 COMMD5Q9GZQ3 224 aa11.45□□□□□ -0.58
CHD4-211ENST00000544484 NARFLQ9H6Q4 476 aa11.45□□□□□ -0.58
CHD4-211ENST00000544484 DOCK5Q9H7D0 1870 aa11.45□□□□□ -0.58
CHD4-211ENST00000544484 SERTM1A2A2V5 107 aa11.45□□□□□ -0.58
CHD4-211ENST00000544484 DVL1O14640 695 aa11.45□□□□□ -0.58
CHD4-211ENST00000544484 RAB5CP51148 216 aa11.45□□□□□ -0.58
CHD4-211ENST00000544484 DVL1P1P54792 670 aaPredicted RBP11.45□□□□□ -0.58
CHD4-211ENST00000544484 NDUFA6P56556 154 aa11.45□□□□□ -0.58
CHD4-211ENST00000544484 PRDX4Q13162 271 aa11.45□□□□□ -0.58
CHD4-211ENST00000544484 KIAA1456Q9P272 454 aa11.45□□□□□ -0.58
CHD4-211ENST00000544484 FOXJ3Q9UPW0 622 aa11.45□□□□□ -0.58
CHD4-211ENST00000544484 A0A1B0GUH1 482 aa11.44□□□□□ -0.58
CHD4-211ENST00000544484 GPR37O15354 613 aa11.44□□□□□ -0.58
CHD4-211ENST00000544484 CA6P23280 308 aa11.44□□□□□ -0.58
CHD4-211ENST00000544484 HOXD11P31277 338 aaPredicted RBP11.44□□□□□ -0.58
CHD4-211ENST00000544484 CD226Q15762 336 aa11.44□□□□□ -0.58
CHD4-211ENST00000544484 SMIM21Q3B7S5 101 aa11.44□□□□□ -0.58
CHD4-211ENST00000544484 AARDQ4LEZ3 155 aa11.44□□□□□ -0.58
CHD4-211ENST00000544484 BAGE3Q86Y29 109 aa11.44□□□□□ -0.58
CHD4-211ENST00000544484 BAGE2Q86Y30 109 aa11.44□□□□□ -0.58
CHD4-211ENST00000544484 TVP23CQ96ET8 276 aa11.44□□□□□ -0.58
CHD4-211ENST00000544484 C4orf45Q96LM5 186 aa11.44□□□□□ -0.58
CHD4-211ENST00000544484 ADAT1Q9BUB4 502 aaKnown RBP11.44□□□□□ -0.58
CHD4-211ENST00000544484 TEX51A0A1B0GUA7 166 aa11.44□□□□□ -0.58
CHD4-211ENST00000544484 PATE3B3GLJ2 98 aa11.44□□□□□ -0.58
CHD4-211ENST00000544484 ARPC3O15145 178 aa11.44□□□□□ -0.58
CHD4-211ENST00000544484 MOSPD3O75425 235 aa11.44□□□□□ -0.58
CHD4-211ENST00000544484 LYZL6O75951 148 aa11.44□□□□□ -0.58
CHD4-211ENST00000544484 CRYBB2P43320 205 aa11.44□□□□□ -0.58
CHD4-211ENST00000544484 FLI1Q01543 452 aaPredicted RBP11.44□□□□□ -0.58
CHD4-211ENST00000544484 DBPQ10586 325 aaPredicted RBP11.44□□□□□ -0.58
CHD4-211ENST00000544484 EIF3IQ13347 325 aaKnown RBP11.44□□□□□ -0.58
CHD4-211ENST00000544484 SSPNQ14714 243 aa11.44□□□□□ -0.58
CHD4-211ENST00000544484 KISS1Q15726 138 aa11.44□□□□□ -0.58
CHD4-211ENST00000544484 SSX1Q16384 188 aa11.44□□□□□ -0.58
CHD4-211ENST00000544484 OR10V1Q8NGI7 309 aa11.44□□□□□ -0.58
CHD4-211ENST00000544484 ZNF391Q9UJN7 358 aa11.44□□□□□ -0.58
CHD4-211ENST00000544484 ASXL3Q9C0F0 2248 aa11.44□□□□□ -0.58
CHD4-211ENST00000544484 PABPC1L2AQ5JQF8 200 aa11.44□□□□□ -0.58
CHD4-211ENST00000544484 RHBDD2Q6NTF9 364 aa11.44□□□□□ -0.58
CHD4-211ENST00000544484 RNF165Q6ZSG1 346 aa11.44□□□□□ -0.58
CHD4-211ENST00000544484 UBE3DQ7Z6J8 389 aa11.44□□□□□ -0.58
CHD4-211ENST00000544484 ZNF71Q9NQZ8 489 aaPredicted RBP11.44□□□□□ -0.58
CHD4-211ENST00000544484 PLSCR3Q9NRY6 295 aa11.44□□□□□ -0.58
CHD4-211ENST00000544484 BTBD17A6NE02 478 aa11.44□□□□□ -0.58
CHD4-211ENST00000544484 CRYM-AS1A6NIL9 109 aa11.44□□□□□ -0.58
CHD4-211ENST00000544484 MMP15P51511 669 aa11.44□□□□□ -0.58
CHD4-211ENST00000544484 CCDC190Q86UF4 302 aa11.44□□□□□ -0.58
CHD4-211ENST00000544484 OR8U1Q8NH10 309 aa11.44□□□□□ -0.58
CHD4-211ENST00000544484 C14orf79Q96F83 325 aa11.44□□□□□ -0.58
CHD4-211ENST00000544484 ICE1Q9Y2F5 2266 aa11.44□□□□□ -0.58
CHD4-211ENST00000544484 CRYABP02511 175 aaKnown RBP11.44□□□□□ -0.58
CHD4-211ENST00000544484 ARL16Q0P5N6 197 aa11.44□□□□□ -0.58
CHD4-211ENST00000544484 RAB35Q15286 201 aa11.44□□□□□ -0.58
CHD4-211ENST00000544484 TIGD3Q6B0B8 471 aa11.44□□□□□ -0.58
CHD4-211ENST00000544484 TERB2Q8NHR7 220 aa11.44□□□□□ -0.58
CHD4-211ENST00000544484 GALMQ96C23 342 aa11.44□□□□□ -0.58
CHD4-211ENST00000544484 ARHGAP5-AS1Q96IT6 56 aa11.44□□□□□ -0.58
CHD4-211ENST00000544484 ZNF75AQ96N20 296 aa11.44□□□□□ -0.58
CHD4-211ENST00000544484 PIGMQ9H3S5 423 aa11.44□□□□□ -0.58
CHD4-211ENST00000544484 LHX9Q9NQ69 397 aa11.44□□□□□ -0.58
CHD4-211ENST00000544484 CYSLTR2Q9NS75 346 aa11.44□□□□□ -0.58
CHD4-211ENST00000544484 QPCTLQ9NXS2 382 aa11.44□□□□□ -0.58
CHD4-211ENST00000544484 HMGA2P52926 109 aa11.44□□□□□ -0.58
CHD4-211ENST00000544484 ARHGEF39Q8N4T4 335 aa11.44□□□□□ -0.58
CHD4-211ENST00000544484 HES7Q9BYE0 225 aa11.44□□□□□ -0.58
CHD4-211ENST00000544484 SMCO4Q9NRQ5 59 aa11.44□□□□□ -0.58
CHD4-211ENST00000544484 CLEC1BQ9P126 229 aa11.44□□□□□ -0.58
CHD4-211ENST00000544484 TRAF3IP2O43734 574 aaPredicted RBP11.43□□□□□ -0.58
CHD4-211ENST00000544484 TBPP20226 339 aa11.43□□□□□ -0.58
CHD4-211ENST00000544484 CDONQ4KMG0 1287 aa11.43□□□□□ -0.58
CHD4-211ENST00000544484 OR4D11Q8NGI4 311 aa11.43□□□□□ -0.58
CHD4-211ENST00000544484 RFESDQ8TAC1 157 aa11.43□□□□□ -0.58
CHD4-211ENST00000544484 C2orf50Q96LR7 162 aa11.43□□□□□ -0.58
CHD4-211ENST00000544484 TMPRSS13Q9BYE2 586 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms