RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 OR10R2Q8NGX6 335 aa2.53□□□□□ -2
SCFD1-207ENST00000544052 SUN5Q8TC36 379 aa2.53□□□□□ -2
SCFD1-207ENST00000544052 GEMIN6Q8WXD5 167 aaKnown RBP2.53□□□□□ -2
SCFD1-207ENST00000544052 ATP6V1G3Q96LB4 118 aa2.53□□□□□ -2
SCFD1-207ENST00000544052 OR2AG1Q9H205 316 aa2.53□□□□□ -2
SCFD1-207ENST00000544052 SAMSN1Q9NSI8 373 aaKnown RBP2.53□□□□□ -2
SCFD1-207ENST00000544052 C20orf96Q9NUD7 363 aaPredicted RBP2.53□□□□□ -2
SCFD1-207ENST00000544052 LYARQ9NX58 379 aaKnown RBP2.53□□□□□ -2
SCFD1-207ENST00000544052 UBAP1Q9NZ09 502 aa2.53□□□□□ -2
SCFD1-207ENST00000544052 MTCH1Q9NZJ7 389 aa2.53□□□□□ -2
SCFD1-207ENST00000544052 NEU3Q9UQ49 428 aa2.53□□□□□ -2
SCFD1-207ENST00000544052 CIB4A0PJX0 185 aa2.53□□□□□ -2.01
SCFD1-207ENST00000544052 PANO1I0J062 215 aa2.53□□□□□ -2.01
SCFD1-207ENST00000544052 CALUO43852 315 aaPredicted RBP2.53□□□□□ -2.01
SCFD1-207ENST00000544052 DPM1O60762 260 aa2.53□□□□□ -2.01
SCFD1-207ENST00000544052 UTS2O95399 124 aa2.53□□□□□ -2.01
SCFD1-207ENST00000544052 IGLV1-47P01700 117 aa2.53□□□□□ -2.01
SCFD1-207ENST00000544052 PNMA6AP0CW24 399 aaPredicted RBP2.53□□□□□ -2.01
SCFD1-207ENST00000544052 GIMD1P0DJR0 217 aa2.53□□□□□ -2.01
SCFD1-207ENST00000544052 CCNB1P14635 433 aa2.53□□□□□ -2.01
SCFD1-207ENST00000544052 MGMTP16455 207 aa2.53□□□□□ -2.01
SCFD1-207ENST00000544052 RCC1P18754 421 aaPredicted RBP2.53□□□□□ -2.01
SCFD1-207ENST00000544052 SRMP19623 302 aa2.53□□□□□ -2.01
SCFD1-207ENST00000544052 STOMP27105 288 aa2.53□□□□□ -2.01
SCFD1-207ENST00000544052 DRD3P35462 400 aa2.53□□□□□ -2.01
SCFD1-207ENST00000544052 SERPINB5P36952 375 aa2.53□□□□□ -2.01
SCFD1-207ENST00000544052 CX3CR1P49238 355 aa2.53□□□□□ -2.01
SCFD1-207ENST00000544052 TDGF1P3P51864 188 aa2.53□□□□□ -2.01
SCFD1-207ENST00000544052 NCBP2P52298 156 aaKnown RBP eCLIP2.53□□□□□ -2.016e-13■■□□□ 13
SCFD1-207ENST00000544052 PAX5Q02548 391 aa2.53□□□□□ -2.01
SCFD1-207ENST00000544052 ZSCAN26Q16670 478 aa2.53□□□□□ -2.01
SCFD1-207ENST00000544052 RFX4Q33E94 735 aa2.53□□□□□ -2.01
SCFD1-207ENST00000544052 COX15Q7KZN9 410 aa2.53□□□□□ -2.01
SCFD1-207ENST00000544052 TMEM135Q86UB9 458 aa2.53□□□□□ -2.01
SCFD1-207ENST00000544052 TAC4Q86UU9 113 aa2.53□□□□□ -2.01
SCFD1-207ENST00000544052 FAM9CQ8IZT9 166 aa2.53□□□□□ -2.01
SCFD1-207ENST00000544052 COMMD1Q8N668 190 aa2.53□□□□□ -2.01
SCFD1-207ENST00000544052 OR8K3Q8NH51 312 aa2.53□□□□□ -2.01
SCFD1-207ENST00000544052 MARCH1Q8TCQ1 289 aa2.53□□□□□ -2.01
SCFD1-207ENST00000544052 FAM131CQ96AQ9 280 aa2.53□□□□□ -2.01
SCFD1-207ENST00000544052 ECHDC3Q96DC8 303 aa2.53□□□□□ -2.01
SCFD1-207ENST00000544052 LRRC39Q96DD0 335 aa2.53□□□□□ -2.01
SCFD1-207ENST00000544052 AURKBQ96GD4 344 aaPredicted RBP2.53□□□□□ -2.01
SCFD1-207ENST00000544052 OSBPL10Q9BXB5 764 aa2.53□□□□□ -2.01
SCFD1-207ENST00000544052 ELOVL6Q9H5J4 265 aa2.53□□□□□ -2.01
SCFD1-207ENST00000544052 PRSS16Q9NQE7 514 aa2.53□□□□□ -2.01
SCFD1-207ENST00000544052 CTPS2Q9NRF8 586 aa2.53□□□□□ -2.01
SCFD1-207ENST00000544052 HRASLS2Q9NWW9 162 aa2.53□□□□□ -2.01
SCFD1-207ENST00000544052 ZNF225Q9UK10 706 aa2.53□□□□□ -2.01
SCFD1-207ENST00000544052 TP53TG5Q9Y2B4 290 aa2.53□□□□□ -2.01
SCFD1-207ENST00000544052 GOLT1BQ9Y3E0 138 aa2.53□□□□□ -2.01
SCFD1-207ENST00000544052 CFAP46Q8IYW2 2715 aa2.52□□□□□ -2.01
SCFD1-207ENST00000544052 ZNF106Q9H2Y7 1883 aaKnown RBP2.52□□□□□ -2.01
SCFD1-207ENST00000544052 TRBV9A0A0B4J1U6 114 aa2.52□□□□□ -2.01
SCFD1-207ENST00000544052 A0A1B0GW55 424 aa2.52□□□□□ -2.01
SCFD1-207ENST00000544052 AIREO43918 545 aa2.52□□□□□ -2.01
SCFD1-207ENST00000544052 EIF4E2O60573 245 aaKnown RBP2.52□□□□□ -2.01
SCFD1-207ENST00000544052 DUX4L2P0CJ85 424 aa2.52□□□□□ -2.01
SCFD1-207ENST00000544052 DUX4L3P0CJ86 424 aa2.52□□□□□ -2.01
SCFD1-207ENST00000544052 DUX4L4P0CJ87 422 aa2.52□□□□□ -2.01
SCFD1-207ENST00000544052 DUX4L5P0CJ88 424 aa2.52□□□□□ -2.01
SCFD1-207ENST00000544052 DUX4L6P0CJ89 424 aa2.52□□□□□ -2.01
SCFD1-207ENST00000544052 DUX4L7P0CJ90 424 aa2.52□□□□□ -2.01
SCFD1-207ENST00000544052 IGHV3-43DP0DP04 118 aa2.52□□□□□ -2.01
SCFD1-207ENST00000544052 ZNF17P17021 662 aa2.52□□□□□ -2.01
SCFD1-207ENST00000544052 AK4P27144 223 aaPredicted RBP2.52□□□□□ -2.01
SCFD1-207ENST00000544052 FOXN2P32314 431 aa2.52□□□□□ -2.01
SCFD1-207ENST00000544052 GTF2H1P32780 548 aa2.52□□□□□ -2.01
SCFD1-207ENST00000544052 SLC1A2P43004 574 aa2.52□□□□□ -2.01
SCFD1-207ENST00000544052 C9orf64Q5T6V5 341 aa2.52□□□□□ -2.01
SCFD1-207ENST00000544052 DEGS2Q6QHC5 323 aa2.52□□□□□ -2.01
SCFD1-207ENST00000544052 DUX4L9Q6RFH8 374 aaPredicted RBP2.52□□□□□ -2.01
SCFD1-207ENST00000544052 TCAIMQ8N3R3 496 aa2.52□□□□□ -2.01
SCFD1-207ENST00000544052 FAM71E2Q8N5Q1 922 aa2.52□□□□□ -2.01
SCFD1-207ENST00000544052 MNS1Q8NEH6 495 aa2.52□□□□□ -2.01
SCFD1-207ENST00000544052 CCDC54Q8NEL0 328 aa2.52□□□□□ -2.01
SCFD1-207ENST00000544052 NPBQ8NG41 125 aa2.52□□□□□ -2.01
SCFD1-207ENST00000544052 LYPD6BQ8NI32 183 aa2.52□□□□□ -2.01
SCFD1-207ENST00000544052 DDI1Q8WTU0 396 aa2.52□□□□□ -2.01
SCFD1-207ENST00000544052 TMEM158Q8WZ71 300 aa2.52□□□□□ -2.01
SCFD1-207ENST00000544052 C19orf60Q96EN9 201 aa2.52□□□□□ -2.01
SCFD1-207ENST00000544052 PIK3IP1Q96FE7 263 aa2.52□□□□□ -2.01
SCFD1-207ENST00000544052 XPO6Q96QU8 1125 aaKnown RBP2.52□□□□□ -2.01
SCFD1-207ENST00000544052 OR2M2Q96R28 347 aa2.52□□□□□ -2.01
SCFD1-207ENST00000544052 ANKRD60Q9BZ19 345 aa2.52□□□□□ -2.01
SCFD1-207ENST00000544052 DNTTIP1Q9H147 329 aa2.52□□□□□ -2.01
SCFD1-207ENST00000544052 DUX4Q9UBX2 424 aa2.52□□□□□ -2.01
SCFD1-207ENST00000544052 GGA2Q9UJY4 613 aa2.52□□□□□ -2.01
SCFD1-207ENST00000544052 ST3GAL6Q9Y274 331 aa2.52□□□□□ -2.01
SCFD1-207ENST00000544052 SLC17A4Q9Y2C5 497 aa2.52□□□□□ -2.01
SCFD1-207ENST00000544052 OR51B4Q9Y5P0 310 aa2.52□□□□□ -2.01
SCFD1-207ENST00000544052 SNX10Q9Y5X0 201 aa2.52□□□□□ -2.01
SCFD1-207ENST00000544052 MRPS18BQ9Y676 258 aaKnown RBP2.52□□□□□ -2.01
SCFD1-207ENST00000544052 HELZ2Q9BYK8 2649 aaKnown RBP2.52□□□□□ -2.01
SCFD1-207ENST00000544052 UNC13CQ8NB66 2214 aa2.52□□□□□ -2.01
SCFD1-207ENST00000544052 COL6A6A6NMZ7 2263 aa2.52□□□□□ -2.01
SCFD1-207ENST00000544052 SDK2Q58EX2 2172 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 LOC100506127A0A0U1RQW1 187 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 A0A1W2PNU3 283 aaPredicted RBP2.51□□□□□ -2.01
SCFD1-207ENST00000544052 H3BNH8 94 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms