RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 F7P08709 466 aaPredicted RBP5.12□□□□□ -1.59
XRCC4-206ENST00000542685 PET100P0DJ07 73 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 GTF2F2P13984 249 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 HSD3B1P14060 373 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 GSTM3P21266 225 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 DGKAP23743 735 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 CXCR1P25024 350 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 OR10J1P30954 320 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 SNCAP37840 140 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 XCR1P46094 333 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 SLC11A1P49279 550 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 RAB7AP51149 207 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 GAS1P54826 345 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 CDH12P55289 794 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 DSCR9P59020 149 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 ERVPABLB-1P60509 514 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 RPS23P62266 143 aaKnown RBP5.12□□□□□ -1.59
XRCC4-206ENST00000542685 PAX5Q02548 391 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 CXCL9Q07325 125 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 OR5I1Q13606 314 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 CLINT1Q14677 625 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 ZNF674Q2M3X9 581 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 SMIM21Q3B7S5 101 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 LINC00303Q3SY05 128 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 MARC1Q5VT66 337 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 DCAF12L2Q5VW00 463 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 OR2T2Q6IF00 324 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 ZNF770Q6IQ21 691 aaPredicted RBP5.12□□□□□ -1.59
XRCC4-206ENST00000542685 TMIGD1Q6UXZ0 262 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 NHLRC1Q6VVB1 395 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 Q6ZTC4 211 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 KCTD9Q7L273 389 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 FAM220AQ7Z4H9 259 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 ABHD12BQ7Z5M8 362 aaPredicted RBP5.12□□□□□ -1.59
XRCC4-206ENST00000542685 BIVMQ86UB2 503 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 C11orf42Q8N5U0 333 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 TMEM217Q8N7C4 229 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 OR13C2Q8NGS9 318 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 CD200R1Q8TD46 325 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 CSGALNACT1Q8TDX6 532 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 MITD1Q8WV92 249 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 HMGB4Q8WW32 186 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 TMEM234Q8WY98 164 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 SMPDL3AQ92484 453 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 RPUSD4Q96CM3 377 aaKnown RBP5.12□□□□□ -1.59
XRCC4-206ENST00000542685 PCED1BQ96HM7 432 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 SLC35E1Q96K37 410 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 APOLD1Q96LR9 279 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 FOXN4Q96NZ1 517 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 TAAR6Q96RI8 345 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 C16orf70Q9BSU1 422 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 FAAP24Q9BTP7 215 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 SELENOIQ9C0D9 397 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 OR2J1Q9GZK6 312 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 ZNF350Q9GZX5 532 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 MAGT1Q9H0U3 335 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 RDH14Q9HBH5 336 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 APMAPQ9HDC9 416 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 Q9N2J8 555 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 PLSCR4Q9NRQ2 329 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 ZNF701Q9NV72 531 aaPredicted RBP5.12□□□□□ -1.59
XRCC4-206ENST00000542685 MARCH4Q9P2E8 410 aaPredicted RBP5.12□□□□□ -1.59
XRCC4-206ENST00000542685 CACNG4Q9UBN1 327 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 GJD2Q9UKL4 321 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 GPR34Q9UPC5 381 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 ANGPT4Q9Y264 503 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 RASD1Q9Y272 281 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 RAI2Q9Y5P3 530 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 ETV7Q9Y603 341 aa5.12□□□□□ -1.59
XRCC4-206ENST00000542685 PLXNA4Q9HCM2 1894 aa5.11□□□□□ -1.59
XRCC4-206ENST00000542685 F6UZH7 168 aa5.11□□□□□ -1.59
XRCC4-206ENST00000542685 P2RX6O15547 441 aa5.11□□□□□ -1.59
XRCC4-206ENST00000542685 OR1I1O60431 355 aa5.11□□□□□ -1.59
XRCC4-206ENST00000542685 FMO6PO60774 539 aa5.11□□□□□ -1.59
XRCC4-206ENST00000542685 CNMDO75829 334 aa5.11□□□□□ -1.59
XRCC4-206ENST00000542685 CYB5R3P00387 301 aaPredicted RBP5.11□□□□□ -1.59
XRCC4-206ENST00000542685 GAPDHP04406 335 aaKnown RBP5.11□□□□□ -1.59
XRCC4-206ENST00000542685 ANKRD34CP0C6C1 535 aa5.11□□□□□ -1.59
XRCC4-206ENST00000542685 LAMP1P11279 417 aa5.11□□□□□ -1.59
XRCC4-206ENST00000542685 LYL1P12980 280 aa5.11□□□□□ -1.59
XRCC4-206ENST00000542685 ATF1P18846 271 aa5.11□□□□□ -1.59
XRCC4-206ENST00000542685 ZBTB25P24278 435 aa5.11□□□□□ -1.59
XRCC4-206ENST00000542685 CHRNB4P30926 498 aa5.11□□□□□ -1.59
XRCC4-206ENST00000542685 CEACAM8P31997 349 aaPredicted RBP5.11□□□□□ -1.59
XRCC4-206ENST00000542685 MC5RP33032 325 aa5.11□□□□□ -1.59
XRCC4-206ENST00000542685 PTGER3P43115 390 aa5.11□□□□□ -1.59
XRCC4-206ENST00000542685 GPR4P46093 362 aa5.11□□□□□ -1.59
XRCC4-206ENST00000542685 CEBPDP49716 269 aaPredicted RBP5.11□□□□□ -1.59
XRCC4-206ENST00000542685 KHKP50053 298 aa5.11□□□□□ -1.59
XRCC4-206ENST00000542685 AKR1C2P52895 323 aa5.11□□□□□ -1.59
XRCC4-206ENST00000542685 CAV3P56539 151 aa5.11□□□□□ -1.59
XRCC4-206ENST00000542685 TMPRSS3P57727 454 aa5.11□□□□□ -1.59
XRCC4-206ENST00000542685 RPS14P62263 151 aaKnown RBP5.11□□□□□ -1.59
XRCC4-206ENST00000542685 IRF8Q02556 426 aa5.11□□□□□ -1.59
XRCC4-206ENST00000542685 AKR1C1Q04828 323 aa5.11□□□□□ -1.59
XRCC4-206ENST00000542685 RASGEF1BQ0VAM2 473 aa5.11□□□□□ -1.59
XRCC4-206ENST00000542685 EBPQ15125 230 aaKnown RBP5.11□□□□□ -1.59
XRCC4-206ENST00000542685 RBBP7Q16576 425 aa5.11□□□□□ -1.59
XRCC4-206ENST00000542685 TMEM176BQ3YBM2 270 aaPredicted RBP5.11□□□□□ -1.59
XRCC4-206ENST00000542685 SYT14P1Q58G82 188 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms