RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 B4GALT3O60512 393 aa13.89□□□□□ -0.19
HMGA2-210ENST00000541363 CST7O76096 145 aa13.89□□□□□ -0.19
HMGA2-210ENST00000541363 HTN1P15515 57 aa13.89□□□□□ -0.19
HMGA2-210ENST00000541363 TNFRSF1AP19438 455 aa13.89□□□□□ -0.19
HMGA2-210ENST00000541363 SYT14P1Q58G82 188 aa13.89□□□□□ -0.19
HMGA2-210ENST00000541363 LMO3Q8TAP4 145 aa13.89□□□□□ -0.19
HMGA2-210ENST00000541363 COPS9Q8WXC6 57 aa13.89□□□□□ -0.19
HMGA2-210ENST00000541363 KISS1RQ969F8 398 aaPredicted RBP13.89□□□□□ -0.19
HMGA2-210ENST00000541363 PCYT2Q99447 389 aa13.89□□□□□ -0.19
HMGA2-210ENST00000541363 HAPLN2Q9GZV7 340 aa13.89□□□□□ -0.19
HMGA2-210ENST00000541363 RNF186Q9NXI6 227 aa13.89□□□□□ -0.19
HMGA2-210ENST00000541363 KRASP01116 189 aa13.89□□□□□ -0.19
HMGA2-210ENST00000541363 GP2P55259 537 aaKnown RBP13.89□□□□□ -0.19
HMGA2-210ENST00000541363 TMEM229BQ8NBD8 167 aa13.89□□□□□ -0.19
HMGA2-210ENST00000541363 ZDHHC5Q9C0B5 715 aa13.89□□□□□ -0.19
HMGA2-210ENST00000541363 CLDN34H7C241 214 aa13.89□□□□□ -0.19
HMGA2-210ENST00000541363 GPANK1O95872 356 aa13.89□□□□□ -0.19
HMGA2-210ENST00000541363 ZNF680Q8NEM1 530 aa13.89□□□□□ -0.19
HMGA2-210ENST00000541363 CORTO00230 105 aa13.88□□□□□ -0.19
HMGA2-210ENST00000541363 PRKRAO75569 313 aaKnown RBP13.88□□□□□ -0.19
HMGA2-210ENST00000541363 JUNBP17275 347 aaPredicted RBP13.88□□□□□ -0.19
HMGA2-210ENST00000541363 SDHBP21912 280 aa13.88□□□□□ -0.19
HMGA2-210ENST00000541363 SLC19A1P41440 591 aa13.88□□□□□ -0.19
HMGA2-210ENST00000541363 C19orf57Q0VDD7 668 aa13.88□□□□□ -0.19
HMGA2-210ENST00000541363 ZNF296Q8WUU4 475 aaPredicted RBP13.88□□□□□ -0.19
HMGA2-210ENST00000541363 NTNG2Q96CW9 530 aa13.88□□□□□ -0.19
HMGA2-210ENST00000541363 HDAC8Q9BY41 377 aa13.88□□□□□ -0.19
HMGA2-210ENST00000541363 MANBALQ9NQG1 85 aa13.88□□□□□ -0.19
HMGA2-210ENST00000541363 A0A087X0M5 115 aa13.88□□□□□ -0.19
HMGA2-210ENST00000541363 A0A1B0GX30 115 aa13.88□□□□□ -0.19
HMGA2-210ENST00000541363 TNFRSF10CO14798 259 aa13.88□□□□□ -0.19
HMGA2-210ENST00000541363 LIPAP38571 399 aa13.88□□□□□ -0.19
HMGA2-210ENST00000541363 LGALS7P47929 136 aa13.88□□□□□ -0.19
HMGA2-210ENST00000541363 C11orf87Q6NUJ2 197 aa13.88□□□□□ -0.19
HMGA2-210ENST00000541363 CCDC190Q86UF4 302 aa13.88□□□□□ -0.19
HMGA2-210ENST00000541363 Q8IYB0 196 aa13.88□□□□□ -0.19
HMGA2-210ENST00000541363 ADPRHL1Q8NDY3 354 aa13.88□□□□□ -0.19
HMGA2-210ENST00000541363 FAM210BQ96KR6 192 aa13.88□□□□□ -0.19
HMGA2-210ENST00000541363 CACNA1CQ13936 2221 aa13.88□□□□□ -0.19
HMGA2-210ENST00000541363 MIA3Q5JRA6 1907 aa13.88□□□□□ -0.19
HMGA2-210ENST00000541363 MFNGO00587 321 aa13.88□□□□□ -0.19
HMGA2-210ENST00000541363 SLC25A26Q70HW3 274 aa13.88□□□□□ -0.19
HMGA2-210ENST00000541363 SLC35B3Q9H1N7 401 aa13.88□□□□□ -0.19
HMGA2-210ENST00000541363 CDK5RAP2Q96SN8 1893 aa13.88□□□□□ -0.19
HMGA2-210ENST00000541363 DUXBA0A1W2PPF3 345 aa13.88□□□□□ -0.19
HMGA2-210ENST00000541363 SPRY3O43610 288 aa13.88□□□□□ -0.19
HMGA2-210ENST00000541363 SOX15O60248 233 aa13.88□□□□□ -0.19
HMGA2-210ENST00000541363 PGA3P0DJD8 388 aa13.88□□□□□ -0.19
HMGA2-210ENST00000541363 PTHLHP12272 177 aa13.88□□□□□ -0.19
HMGA2-210ENST00000541363 CLDN18P56856 261 aa13.88□□□□□ -0.19
HMGA2-210ENST00000541363 LYZP61626 148 aa13.88□□□□□ -0.19
HMGA2-210ENST00000541363 C19orf54Q5BKX5 351 aa13.88□□□□□ -0.19
HMGA2-210ENST00000541363 OR52N5Q8NH56 324 aa13.88□□□□□ -0.19
HMGA2-210ENST00000541363 RELBQ01201 579 aa13.88□□□□□ -0.19
HMGA2-210ENST00000541363 FZD2Q14332 565 aa13.88□□□□□ -0.19
HMGA2-210ENST00000541363 TMEM128Q5BJH2 165 aa13.88□□□□□ -0.19
HMGA2-210ENST00000541363 K7ESF4 209 aa13.88□□□□□ -0.19
HMGA2-210ENST00000541363 HOXC11O43248 304 aaPredicted RBP13.88□□□□□ -0.19
HMGA2-210ENST00000541363 ZNF121P58317 390 aaPredicted RBP13.88□□□□□ -0.19
HMGA2-210ENST00000541363 FAAP20Q6NZ36 180 aa13.88□□□□□ -0.19
HMGA2-210ENST00000541363 DND1Q8IYX4 353 aaKnown RBP13.88□□□□□ -0.19
HMGA2-210ENST00000541363 CADM3Q8N126 398 aa13.88□□□□□ -0.19
HMGA2-210ENST00000541363 D2HGDHQ8N465 521 aa13.88□□□□□ -0.19
HMGA2-210ENST00000541363 NUP37Q8NFH4 326 aa13.88□□□□□ -0.19
HMGA2-210ENST00000541363 SPACA5Q96QH8 159 aa13.88□□□□□ -0.19
HMGA2-210ENST00000541363 C3P01024 1663 aa13.88□□□□□ -0.19
HMGA2-210ENST00000541363 DHRS7CA6NNS2 312 aa13.87□□□□□ -0.19
HMGA2-210ENST00000541363 EMP1P54849 157 aa13.87□□□□□ -0.19
HMGA2-210ENST00000541363 XKR7Q5GH72 579 aa13.87□□□□□ -0.19
HMGA2-210ENST00000541363 NUDCD2Q8WVJ2 157 aa13.87□□□□□ -0.19
HMGA2-210ENST00000541363 KIR3DX1Q9H7L2 352 aa13.87□□□□□ -0.19
HMGA2-210ENST00000541363 ZNF638Q14966 1978 aaKnown RBP13.87□□□□□ -0.19
HMGA2-210ENST00000541363 ZC3H12DA2A288 527 aaKnown RBP13.87□□□□□ -0.19
HMGA2-210ENST00000541363 CD3DP04234 171 aa13.87□□□□□ -0.19
HMGA2-210ENST00000541363 SLC38A11Q08AI6 406 aa13.87□□□□□ -0.19
HMGA2-210ENST00000541363 C21orf62-AS1Q17RA5 79 aa13.87□□□□□ -0.19
HMGA2-210ENST00000541363 BCORP1Q8N888 145 aa13.87□□□□□ -0.19
HMGA2-210ENST00000541363 OR2Z1Q8NG97 314 aa13.87□□□□□ -0.19
HMGA2-210ENST00000541363 SMIM19Q96E16 107 aa13.87□□□□□ -0.19
HMGA2-210ENST00000541363 CLEC1BQ9P126 229 aa13.87□□□□□ -0.19
HMGA2-210ENST00000541363 ARFGEF2Q9Y6D5 1785 aa13.87□□□□□ -0.19
HMGA2-210ENST00000541363 OR5B21A6NL26 309 aa13.87□□□□□ -0.19
HMGA2-210ENST00000541363 MASP2O00187 686 aa13.87□□□□□ -0.19
HMGA2-210ENST00000541363 TRAT1Q6PIZ9 186 aa13.87□□□□□ -0.19
HMGA2-210ENST00000541363 WDR89Q96FK6 387 aaPredicted RBP13.87□□□□□ -0.19
HMGA2-210ENST00000541363 SRD5A3Q9H8P0 318 aa13.87□□□□□ -0.19
HMGA2-210ENST00000541363 SLC25A22Q9H936 323 aa13.87□□□□□ -0.19
HMGA2-210ENST00000541363 CSN3P07498 182 aa13.87□□□□□ -0.19
HMGA2-210ENST00000541363 PPP1CCP36873 323 aaKnown RBP13.87□□□□□ -0.19
HMGA2-210ENST00000541363 FAM78BQ5VT40 261 aa13.87□□□□□ -0.19
HMGA2-210ENST00000541363 LAT2Q9GZY6 243 aa13.87□□□□□ -0.19
HMGA2-210ENST00000541363 LHX3Q9UBR4 397 aa13.87□□□□□ -0.19
HMGA2-210ENST00000541363 OR51B4Q9Y5P0 310 aa13.87□□□□□ -0.19
HMGA2-210ENST00000541363 CEACAM6P40199 344 aa13.87□□□□□ -0.19
HMGA2-210ENST00000541363 KLRB1Q12918 225 aa13.87□□□□□ -0.19
HMGA2-210ENST00000541363 OR8A1Q8NGG7 326 aa13.87□□□□□ -0.19
HMGA2-210ENST00000541363 UBTD2Q8WUN7 234 aa13.87□□□□□ -0.19
HMGA2-210ENST00000541363 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.87□□□□□ -0.19
HMGA2-210ENST00000541363 MOB4Q9Y3A3 225 aa13.87□□□□□ -0.19
HMGA2-210ENST00000541363 DSCR3O14972 297 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms