RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 YOD1Q5VVQ6 348 aaPredicted RBP9.22□□□□□ -0.93
CHFR-219ENST00000541341 ZNF787Q6DD87 383 aa9.22□□□□□ -0.93
CHFR-219ENST00000541341 DCXRQ7Z4W1 244 aa9.22□□□□□ -0.93
CHFR-219ENST00000541341 OR4N5Q8IXE1 308 aa9.22□□□□□ -0.93
CHFR-219ENST00000541341 PRSS35Q8N3Z0 413 aa9.22□□□□□ -0.93
CHFR-219ENST00000541341 JAGN1Q8N5M9 183 aa9.22□□□□□ -0.93
CHFR-219ENST00000541341 OR8G5Q8NG78 346 aa9.22□□□□□ -0.93
CHFR-219ENST00000541341 OR56B1Q8NGI3 324 aa9.22□□□□□ -0.93
CHFR-219ENST00000541341 OR13C8Q8NGS7 320 aa9.22□□□□□ -0.93
CHFR-219ENST00000541341 OR52N5Q8NH56 324 aa9.22□□□□□ -0.93
CHFR-219ENST00000541341 ZNF563Q8TA94 476 aa9.22□□□□□ -0.93
CHFR-219ENST00000541341 PRR7Q8TB68 274 aa9.22□□□□□ -0.93
CHFR-219ENST00000541341 RXFP4Q8TDU9 374 aa9.22□□□□□ -0.93
CHFR-219ENST00000541341 RNF166Q96A37 237 aaPredicted RBP9.22□□□□□ -0.93
CHFR-219ENST00000541341 ANKRD9Q96BM1 317 aaPredicted RBP9.22□□□□□ -0.93
CHFR-219ENST00000541341 CPNE2Q96FN4 548 aaPredicted RBP9.22□□□□□ -0.93
CHFR-219ENST00000541341 SLC6A7Q99884 636 aa9.22□□□□□ -0.93
CHFR-219ENST00000541341 TTTY10Q9BZA0 68 aa9.22□□□□□ -0.93
CHFR-219ENST00000541341 CHST6Q9GZX3 395 aa9.22□□□□□ -0.93
CHFR-219ENST00000541341 TLNRD1Q9H1K6 362 aa9.22□□□□□ -0.93
CHFR-219ENST00000541341 TXNIPQ9H3M7 391 aa9.22□□□□□ -0.93
CHFR-219ENST00000541341 RGCCQ9H4X1 137 aa9.22□□□□□ -0.93
CHFR-219ENST00000541341 BCO1Q9HAY6 547 aa9.22□□□□□ -0.93
CHFR-219ENST00000541341 TAF9BQ9HBM6 251 aa9.22□□□□□ -0.93
CHFR-219ENST00000541341 FGF21Q9NSA1 209 aa9.22□□□□□ -0.93
CHFR-219ENST00000541341 C1orf123Q9NWV4 160 aa9.22□□□□□ -0.93
CHFR-219ENST00000541341 GDF2Q9UK05 429 aaPredicted RBP9.22□□□□□ -0.93
CHFR-219ENST00000541341 ANAPC10Q9UM13 185 aa9.22□□□□□ -0.93
CHFR-219ENST00000541341 B9D1Q9UPM9 204 aa9.22□□□□□ -0.93
CHFR-219ENST00000541341 TIMM10BQ9Y5J6 103 aa9.22□□□□□ -0.93
CHFR-219ENST00000541341 USP9YO00507 2555 aaPredicted RBP9.22□□□□□ -0.93
CHFR-219ENST00000541341 CENPVL1A0A0U1RR11 272 aa9.21□□□□□ -0.94
CHFR-219ENST00000541341 MASP2O00187 686 aa9.21□□□□□ -0.94
CHFR-219ENST00000541341 SCRG1O75711 98 aa9.21□□□□□ -0.94
CHFR-219ENST00000541341 CSTBP04080 98 aaKnown RBP9.21□□□□□ -0.94
CHFR-219ENST00000541341 SEC11BP0C7V7 166 aa9.21□□□□□ -0.94
CHFR-219ENST00000541341 TMIGD3P0DMS9 266 aaPredicted RBP9.21□□□□□ -0.94
CHFR-219ENST00000541341 RCC1P18754 421 aaPredicted RBP9.21□□□□□ -0.94
CHFR-219ENST00000541341 AGAP20933 346 aa9.21□□□□□ -0.94
CHFR-219ENST00000541341 PTGER1P34995 402 aa9.21□□□□□ -0.94
CHFR-219ENST00000541341 MAS1LP35410 378 aa9.21□□□□□ -0.94
CHFR-219ENST00000541341 KIR3DL2P43630 455 aa9.21□□□□□ -0.94
CHFR-219ENST00000541341 DAP3P51398 398 aaKnown RBP9.21□□□□□ -0.94
CHFR-219ENST00000541341 RPL18Q07020 188 aaKnown RBP9.21□□□□□ -0.94
CHFR-219ENST00000541341 DEFB110Q30KQ9 67 aa9.21□□□□□ -0.94
CHFR-219ENST00000541341 FAM74A1Q5RGS3 127 aa9.21□□□□□ -0.94
CHFR-219ENST00000541341 GPR157Q5UAW9 335 aa9.21□□□□□ -0.94
CHFR-219ENST00000541341 MED25Q71SY5 747 aa9.21□□□□□ -0.94
CHFR-219ENST00000541341 KCTD9Q7L273 389 aa9.21□□□□□ -0.94
CHFR-219ENST00000541341 NAA40Q86UY6 237 aa9.21□□□□□ -0.94
CHFR-219ENST00000541341 CD163Q86VB7 1156 aa9.21□□□□□ -0.94
CHFR-219ENST00000541341 FJX1Q86VR8 437 aa9.21□□□□□ -0.94
CHFR-219ENST00000541341 BCORP1Q8N888 145 aa9.21□□□□□ -0.94
CHFR-219ENST00000541341 WDSUB1Q8N9V3 476 aa9.21□□□□□ -0.94
CHFR-219ENST00000541341 SLC38A9Q8NBW4 561 aa9.21□□□□□ -0.94
CHFR-219ENST00000541341 OR10R2Q8NGX6 335 aa9.21□□□□□ -0.94
CHFR-219ENST00000541341 OR4K15Q8NH41 348 aa9.21□□□□□ -0.94
CHFR-219ENST00000541341 OR1L3Q8NH93 324 aa9.21□□□□□ -0.94
CHFR-219ENST00000541341 TMEM234Q8WY98 164 aa9.21□□□□□ -0.94
CHFR-219ENST00000541341 ZNF75AQ96N20 296 aa9.21□□□□□ -0.94
CHFR-219ENST00000541341 LPAR4Q99677 370 aa9.21□□□□□ -0.94
CHFR-219ENST00000541341 SMAD5Q99717 465 aaKnown RBP9.21□□□□□ -0.94
CHFR-219ENST00000541341 MACROD1Q9BQ69 325 aa9.21□□□□□ -0.94
CHFR-219ENST00000541341 OCSTAMPQ9BR26 566 aa9.21□□□□□ -0.94
CHFR-219ENST00000541341 TINAGL1Q9GZM7 467 aaPredicted RBP9.21□□□□□ -0.94
CHFR-219ENST00000541341 CST11Q9H112 138 aa9.21□□□□□ -0.94
CHFR-219ENST00000541341 METTL8Q9H825 291 aaKnown RBP9.21□□□□□ -0.94
CHFR-219ENST00000541341 SEBOXQ9HB31 216 aaPredicted RBP9.21□□□□□ -0.94
CHFR-219ENST00000541341 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.21□□□□□ -0.943e-7■■■■□ 22.9
CHFR-219ENST00000541341 PRTFDC1Q9NRG1 225 aa9.21□□□□□ -0.94
CHFR-219ENST00000541341 CUTCQ9NTM9 273 aa9.21□□□□□ -0.94
CHFR-219ENST00000541341 FBXO34Q9NWN3 711 aa9.21□□□□□ -0.94
CHFR-219ENST00000541341 C14orf166Q9Y224 244 aaKnown RBP9.21□□□□□ -0.94
CHFR-219ENST00000541341 TMED3Q9Y3Q3 217 aa9.21□□□□□ -0.94
CHFR-219ENST00000541341 MMACHCQ9Y4U1 282 aa9.21□□□□□ -0.94
CHFR-219ENST00000541341 DOCK10Q96BY6 2186 aa9.21□□□□□ -0.94
CHFR-219ENST00000541341 CELSR2Q9HCU4 2923 aa9.21□□□□□ -0.94
CHFR-219ENST00000541341 NPIPA5A0A0B4J1W7 369 aa9.2□□□□□ -0.94
CHFR-219ENST00000541341 C13orf42A0A1B0GVH6 325 aa9.2□□□□□ -0.94
CHFR-219ENST00000541341 A0A1W2PS29 197 aa9.2□□□□□ -0.94
CHFR-219ENST00000541341 COLCA2A8K830 154 aa9.2□□□□□ -0.94
CHFR-219ENST00000541341 TMEM150CB9EJG8 249 aa9.2□□□□□ -0.94
CHFR-219ENST00000541341 EEF1E1-BLOC1S5C9J1V9 151 aa9.2□□□□□ -0.94
CHFR-219ENST00000541341 NPIPA7E9PJI5 369 aa9.2□□□□□ -0.94
CHFR-219ENST00000541341 M0QYG6 137 aa9.2□□□□□ -0.94
CHFR-219ENST00000541341 AP4M1O00189 453 aa9.2□□□□□ -0.94
CHFR-219ENST00000541341 EIF1BO60739 113 aaKnown RBP9.2□□□□□ -0.94
CHFR-219ENST00000541341 AKR7A3O95154 331 aa9.2□□□□□ -0.94
CHFR-219ENST00000541341 HTR3BO95264 441 aa9.2□□□□□ -0.94
CHFR-219ENST00000541341 TSPAN15O95858 294 aa9.2□□□□□ -0.94
CHFR-219ENST00000541341 SFTA3P0C7M3 94 aa9.2□□□□□ -0.94
CHFR-219ENST00000541341 FAM157CP0CG43 387 aa9.2□□□□□ -0.94
CHFR-219ENST00000541341 NPIPA8P0DM63 369 aa9.2□□□□□ -0.94
CHFR-219ENST00000541341 SERPINF1P36955 418 aa9.2□□□□□ -0.94
CHFR-219ENST00000541341 EIF1P41567 113 aaKnown RBP9.2□□□□□ -0.94
CHFR-219ENST00000541341 OR3A2P47893 321 aa9.2□□□□□ -0.94
CHFR-219ENST00000541341 POLR2HP52434 150 aaKnown RBP9.2□□□□□ -0.94
CHFR-219ENST00000541341 PNLIPRP2P54317 469 aa9.2□□□□□ -0.94
CHFR-219ENST00000541341 RPS15P62841 145 aaKnown RBP9.2□□□□□ -0.94
CHFR-219ENST00000541341 GUCA2AQ02747 115 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms