RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 CNN3Q15417 329 aaKnown RBP14.89□□□□□ -0.03
CLSTN3-210ENST00000540931 ZNF181Q2M3W8 571 aa14.89□□□□□ -0.03
CLSTN3-210ENST00000540931 CEACAM21Q3KPI0 293 aa14.89□□□□□ -0.03
CLSTN3-210ENST00000540931 ALKBH6Q3KRA9 238 aa14.89□□□□□ -0.03
CLSTN3-210ENST00000540931 UTS2BQ765I0 119 aa14.89□□□□□ -0.03
CLSTN3-210ENST00000540931 SERPINA12Q8IW75 414 aa14.89□□□□□ -0.03
CLSTN3-210ENST00000540931 OR13C3Q8NGS6 347 aa14.89□□□□□ -0.03
CLSTN3-210ENST00000540931 RNF166Q96A37 237 aaPredicted RBP14.89□□□□□ -0.03
CLSTN3-210ENST00000540931 PERPQ96FX8 193 aa14.89□□□□□ -0.03
CLSTN3-210ENST00000540931 CHODLQ9H9P2 273 aa14.89□□□□□ -0.03
CLSTN3-210ENST00000540931 ZNF275Q9NSD4 429 aaPredicted RBP14.89□□□□□ -0.03
CLSTN3-210ENST00000540931 AKAP6Q13023 2319 aa14.88□□□□□ -0.03
CLSTN3-210ENST00000540931 IGHV1-69-2A0A0G2JMI3 117 aa14.88□□□□□ -0.03
CLSTN3-210ENST00000540931 PTBP3O95758 552 aaKnown RBP14.88□□□□□ -0.03
CLSTN3-210ENST00000540931 IGHV4-39P01824 125 aa14.88□□□□□ -0.03
CLSTN3-210ENST00000540931 OCM2P0CE71 109 aa14.88□□□□□ -0.03
CLSTN3-210ENST00000540931 OCMP0CE72 109 aaPredicted RBP14.88□□□□□ -0.03
CLSTN3-210ENST00000540931 IRF2P14316 349 aa14.88□□□□□ -0.03
CLSTN3-210ENST00000540931 CELP19835 753 aa14.88□□□□□ -0.03
CLSTN3-210ENST00000540931 PRKACBP22694 351 aa14.88□□□□□ -0.03
CLSTN3-210ENST00000540931 RANBP1P43487 201 aa14.88□□□□□ -0.03
CLSTN3-210ENST00000540931 ART1P52961 327 aa14.88□□□□□ -0.03
CLSTN3-210ENST00000540931 PRDX4Q13162 271 aa14.88□□□□□ -0.03
CLSTN3-210ENST00000540931 TMEM42Q69YG0 159 aa14.88□□□□□ -0.03
CLSTN3-210ENST00000540931 Q6ZR03 302 aa14.88□□□□□ -0.03
CLSTN3-210ENST00000540931 OR11L1Q8NGX0 322 aa14.88□□□□□ -0.03
CLSTN3-210ENST00000540931 TSEN15Q8WW01 171 aaKnown RBP14.88□□□□□ -0.03
CLSTN3-210ENST00000540931 PIGCQ92535 297 aa14.88□□□□□ -0.03
CLSTN3-210ENST00000540931 PHYHIPQ92561 330 aa14.88□□□□□ -0.03
CLSTN3-210ENST00000540931 GHSRQ92847 366 aa14.88□□□□□ -0.03
CLSTN3-210ENST00000540931 TIMD4Q96H15 378 aa14.88□□□□□ -0.03
CLSTN3-210ENST00000540931 OR2V2Q96R30 315 aa14.88□□□□□ -0.03
CLSTN3-210ENST00000540931 CHST5Q9GZS9 411 aa14.88□□□□□ -0.03
CLSTN3-210ENST00000540931 TPK1Q9H3S4 243 aa14.88□□□□□ -0.03
CLSTN3-210ENST00000540931 FN3KRPQ9HA64 309 aa14.88□□□□□ -0.03
CLSTN3-210ENST00000540931 ACOT13Q9NPJ3 140 aa14.88□□□□□ -0.03
CLSTN3-210ENST00000540931 CKLFQ9UBR5 152 aa14.88□□□□□ -0.03
CLSTN3-210ENST00000540931 PPP1R3CQ9UQK1 317 aa14.88□□□□□ -0.03
CLSTN3-210ENST00000540931 LSM2Q9Y333 95 aaKnown RBP14.88□□□□□ -0.03
CLSTN3-210ENST00000540931 RHBDD3Q9Y3P4 386 aa14.88□□□□□ -0.03
CLSTN3-210ENST00000540931 C5orf63A6NC05 138 aa14.87□□□□□ -0.03
CLSTN3-210ENST00000540931 ANKRD61A6NGH8 418 aa14.87□□□□□ -0.03
CLSTN3-210ENST00000540931 E9PI62 339 aa14.87□□□□□ -0.03
CLSTN3-210ENST00000540931 SLC25A16P16260 332 aa14.87□□□□□ -0.03
CLSTN3-210ENST00000540931 ACKR3P25106 362 aa14.87□□□□□ -0.03
CLSTN3-210ENST00000540931 GTF2A1P52655 376 aaPredicted RBP14.87□□□□□ -0.03
CLSTN3-210ENST00000540931 GNG3P63215 75 aa14.87□□□□□ -0.03
CLSTN3-210ENST00000540931 TPBGQ13641 420 aa14.87□□□□□ -0.03
CLSTN3-210ENST00000540931 TSTQ16762 297 aaKnown RBP14.87□□□□□ -0.03
CLSTN3-210ENST00000540931 ODF4Q2M2E3 257 aa14.87□□□□□ -0.03
CLSTN3-210ENST00000540931 Q499Y3 187 aa14.87□□□□□ -0.03
CLSTN3-210ENST00000540931 SPARTQ8N0X7 666 aa14.87□□□□□ -0.03
CLSTN3-210ENST00000540931 PARP16Q8N5Y8 322 aa14.87□□□□□ -0.03
CLSTN3-210ENST00000540931 DNAAF1Q8NEP3 725 aa14.87□□□□□ -0.03
CLSTN3-210ENST00000540931 FAM168AQ92567 244 aa14.87□□□□□ -0.03
CLSTN3-210ENST00000540931 PPP1R14AQ96A00 147 aa14.87□□□□□ -0.03
CLSTN3-210ENST00000540931 SPSB1Q96BD6 273 aa14.87□□□□□ -0.03
CLSTN3-210ENST00000540931 MEGF10Q96KG7 1140 aa14.87□□□□□ -0.03
CLSTN3-210ENST00000540931 MGLLQ99685 303 aa14.87□□□□□ -0.03
CLSTN3-210ENST00000540931 PDCD1LG2Q9BQ51 273 aa14.87□□□□□ -0.03
CLSTN3-210ENST00000540931 ZNF696Q9H7X3 374 aa14.87□□□□□ -0.03
CLSTN3-210ENST00000540931 NIPBLQ6KC79 2804 aaeCLIP14.86□□□□□ -0.03
CLSTN3-210ENST00000540931 ZNF850A8MQ14 1090 aa14.86□□□□□ -0.03
CLSTN3-210ENST00000540931 MLNRO43193 412 aa14.86□□□□□ -0.03
CLSTN3-210ENST00000540931 SSX4O60224 188 aa14.86□□□□□ -0.03
CLSTN3-210ENST00000540931 FSTL3O95633 263 aa14.86□□□□□ -0.03
CLSTN3-210ENST00000540931 FAHP16930 419 aa14.86□□□□□ -0.03
CLSTN3-210ENST00000540931 CPT2P23786 658 aa14.86□□□□□ -0.03
CLSTN3-210ENST00000540931 MAGEB1P43366 347 aa14.86□□□□□ -0.03
CLSTN3-210ENST00000540931 FUT6P51993 359 aa14.86□□□□□ -0.03
CLSTN3-210ENST00000540931 EMX1Q04741 257 aaPredicted RBP14.86□□□□□ -0.03
CLSTN3-210ENST00000540931 TNK1Q13470 666 aa14.86□□□□□ -0.03
CLSTN3-210ENST00000540931 FAM76BQ5HYJ3 339 aa14.86□□□□□ -0.03
CLSTN3-210ENST00000540931 TMEM255AQ5JRV8 349 aa14.86□□□□□ -0.03
CLSTN3-210ENST00000540931 UBE2UQ5VVX9 321 aa14.86□□□□□ -0.03
CLSTN3-210ENST00000540931 ZNF573Q86YE8 665 aa14.86□□□□□ -0.03
CLSTN3-210ENST00000540931 Q8TCH9 128 aa14.86□□□□□ -0.03
CLSTN3-210ENST00000540931 OR5P3Q8WZ94 311 aa14.86□□□□□ -0.03
CLSTN3-210ENST00000540931 ITPKCQ96DU7 683 aa14.86□□□□□ -0.03
CLSTN3-210ENST00000540931 PIMREGQ9BSJ6 248 aa14.86□□□□□ -0.03
CLSTN3-210ENST00000540931 MAGEB3O15480 346 aa14.85□□□□□ -0.03
CLSTN3-210ENST00000540931 HSMCR30P0CW71 290 aa14.85□□□□□ -0.03
CLSTN3-210ENST00000540931 CPEP16870 476 aa14.85□□□□□ -0.03
CLSTN3-210ENST00000540931 GIFP27352 417 aa14.85□□□□□ -0.03
CLSTN3-210ENST00000540931 CLEC12BQ2HXU8 276 aa14.85□□□□□ -0.03
CLSTN3-210ENST00000540931 Q5PR19 223 aa14.85□□□□□ -0.03
CLSTN3-210ENST00000540931 PLCXD3Q63HM9 321 aa14.85□□□□□ -0.03
CLSTN3-210ENST00000540931 RDH10Q8IZV5 341 aa14.85□□□□□ -0.03
CLSTN3-210ENST00000540931 ZCCHC24Q8N2G6 241 aaKnown RBP14.85□□□□□ -0.03
CLSTN3-210ENST00000540931 TSPAN14Q8NG11 270 aa14.85□□□□□ -0.03
CLSTN3-210ENST00000540931 OR10AD1Q8NGE0 317 aa14.85□□□□□ -0.03
CLSTN3-210ENST00000540931 RAB1CQ92928 201 aa14.85□□□□□ -0.03
CLSTN3-210ENST00000540931 RNF170Q96K19 258 aa14.85□□□□□ -0.03
CLSTN3-210ENST00000540931 ARID1AO14497 2285 aa14.85□□□□□ -0.03
CLSTN3-210ENST00000540931 LRP5LA4QPB2 252 aa14.84□□□□□ -0.03
CLSTN3-210ENST00000540931 CLDN25C9JDP6 229 aa14.84□□□□□ -0.03
CLSTN3-210ENST00000540931 F5H5P2 479 aa14.84□□□□□ -0.03
CLSTN3-210ENST00000540931 HPXP02790 462 aa14.84□□□□□ -0.03
CLSTN3-210ENST00000540931 HLA-DPB1P04440 258 aa14.84□□□□□ -0.03
CLSTN3-210ENST00000540931 HEXAP06865 529 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms