RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 FAHD2AQ96GK7 314 aa7.74□□□□□ -1.17
SNHG1-215ENST00000540904 RNF170Q96K19 258 aa7.74□□□□□ -1.17
SNHG1-215ENST00000540904 HIST1H2AAQ96QV6 131 aa7.74□□□□□ -1.17
SNHG1-215ENST00000540904 TMEM246Q9BRR3 403 aa7.74□□□□□ -1.17
SNHG1-215ENST00000540904 RTL8AQ9BWD3 113 aa7.74□□□□□ -1.17
SNHG1-215ENST00000540904 PATZ1Q9HBE1 687 aaKnown RBP7.74□□□□□ -1.17
SNHG1-215ENST00000540904 TMEM165Q9HC07 324 aa7.74□□□□□ -1.17
SNHG1-215ENST00000540904 ABCB9Q9NP78 766 aa7.74□□□□□ -1.17
SNHG1-215ENST00000540904 LPAR3Q9UBY5 353 aa7.74□□□□□ -1.17
SNHG1-215ENST00000540904 NKX1-2Q9UD57 310 aaPredicted RBP7.74□□□□□ -1.17
SNHG1-215ENST00000540904 PIGLQ9Y2B2 252 aa7.74□□□□□ -1.17
SNHG1-215ENST00000540904 EXOGQ9Y2C4 368 aaKnown RBP7.74□□□□□ -1.17
SNHG1-215ENST00000540904 MYRFQ9Y2G1 1151 aa7.74□□□□□ -1.17
SNHG1-215ENST00000540904 RPL36Q9Y3U8 105 aaKnown RBP7.74□□□□□ -1.17
SNHG1-215ENST00000540904 PPIAL4AQ9Y536 164 aa7.74□□□□□ -1.17
SNHG1-215ENST00000540904 PCDHGB1Q9Y5G3 927 aa7.74□□□□□ -1.17
SNHG1-215ENST00000540904 SETD2Q9BYW2 2564 aaPredicted RBP7.73□□□□□ -1.17
SNHG1-215ENST00000540904 NF1P21359 2839 aa7.73□□□□□ -1.17
SNHG1-215ENST00000540904 A0A1B0GTI1 187 aa7.73□□□□□ -1.17
SNHG1-215ENST00000540904 A6NIN4 97 aa7.73□□□□□ -1.17
SNHG1-215ENST00000540904 C3orf80F5H4A9 247 aa7.73□□□□□ -1.17
SNHG1-215ENST00000540904 H3BSH0 61 aa7.73□□□□□ -1.17
SNHG1-215ENST00000540904 J3QLW9 94 aa7.73□□□□□ -1.17
SNHG1-215ENST00000540904 PHF1O43189 567 aaPredicted RBP7.73□□□□□ -1.17
SNHG1-215ENST00000540904 WBP4O75554 376 aaKnown RBP7.73□□□□□ -1.17
SNHG1-215ENST00000540904 FADS2O95864 444 aaKnown RBP7.73□□□□□ -1.17
SNHG1-215ENST00000540904 RPS2P15880 293 aaKnown RBP7.73□□□□□ -1.17
SNHG1-215ENST00000540904 ZNF19P17023 458 aa7.73□□□□□ -1.17
SNHG1-215ENST00000540904 SRD5A1P18405 259 aa7.73□□□□□ -1.17
SNHG1-215ENST00000540904 PCMT1P22061 227 aa7.73□□□□□ -1.17
SNHG1-215ENST00000540904 ZFP36P26651 326 aaKnown RBP7.73□□□□□ -1.17
SNHG1-215ENST00000540904 CD80P33681 288 aa7.73□□□□□ -1.17
SNHG1-215ENST00000540904 GPM6AP51674 278 aa7.73□□□□□ -1.17
SNHG1-215ENST00000540904 OR12D2P58182 307 aa7.73□□□□□ -1.17
SNHG1-215ENST00000540904 SEC61A1P61619 476 aaKnown RBP7.73□□□□□ -1.17
SNHG1-215ENST00000540904 ACTA2P62736 377 aa7.73□□□□□ -1.17
SNHG1-215ENST00000540904 ACTG2P63267 376 aa7.73□□□□□ -1.17
SNHG1-215ENST00000540904 ZNF404Q494X3 552 aa7.73□□□□□ -1.17
SNHG1-215ENST00000540904 CDONQ4KMG0 1287 aa7.73□□□□□ -1.17
SNHG1-215ENST00000540904 ESCO2Q56NI9 601 aa7.73□□□□□ -1.17
SNHG1-215ENST00000540904 WDR38Q5JTN6 314 aa7.73□□□□□ -1.17
SNHG1-215ENST00000540904 PLCXD3Q63HM9 321 aa7.73□□□□□ -1.17
SNHG1-215ENST00000540904 MOB3CQ70IA8 216 aa7.73□□□□□ -1.17
SNHG1-215ENST00000540904 DOK3Q7L591 496 aa7.73□□□□□ -1.17
SNHG1-215ENST00000540904 KCTD20Q7Z5Y7 419 aa7.73□□□□□ -1.17
SNHG1-215ENST00000540904 LHFPL3Q86UP9 236 aa7.73□□□□□ -1.17
SNHG1-215ENST00000540904 PRIMA1Q86XR5 153 aa7.73□□□□□ -1.17
SNHG1-215ENST00000540904 C11orf53Q8IXP5 236 aa7.73□□□□□ -1.17
SNHG1-215ENST00000540904 PRSS35Q8N3Z0 413 aa7.73□□□□□ -1.17
SNHG1-215ENST00000540904 OR52I1Q8NGK6 324 aa7.73□□□□□ -1.17
SNHG1-215ENST00000540904 CNIH3Q8TBE1 160 aa7.73□□□□□ -1.17
SNHG1-215ENST00000540904 LRRC29Q8WV35 223 aa7.73□□□□□ -1.17
SNHG1-215ENST00000540904 HPSE2Q8WWQ2 592 aa7.73□□□□□ -1.17
SNHG1-215ENST00000540904 MRPL48Q96GC5 212 aaKnown RBP7.73□□□□□ -1.17
SNHG1-215ENST00000540904 C4orf36Q96KX1 117 aa7.73□□□□□ -1.17
SNHG1-215ENST00000540904 ADI1Q9BV57 179 aa7.73□□□□□ -1.17
SNHG1-215ENST00000540904 VCXQ9H320 206 aa7.73□□□□□ -1.17
SNHG1-215ENST00000540904 METTL17Q9H7H0 456 aaPredicted RBP7.73□□□□□ -1.17
SNHG1-215ENST00000540904 MIOXQ9UGB7 285 aa7.73□□□□□ -1.17
SNHG1-215ENST00000540904 ENPP5Q9UJA9 477 aa7.73□□□□□ -1.17
SNHG1-215ENST00000540904 DYSFO75923 2080 aa7.72□□□□□ -1.17
SNHG1-215ENST00000540904 NSD1Q96L73 2696 aaPredicted RBP7.72□□□□□ -1.17
SNHG1-215ENST00000540904 IGHV3OR15-7A0A075B7D8 119 aa7.72□□□□□ -1.17
SNHG1-215ENST00000540904 TRAV38-1A0A0B4J264 116 aa7.72□□□□□ -1.17
SNHG1-215ENST00000540904 A0A0G2JMP0 313 aa7.72□□□□□ -1.17
SNHG1-215ENST00000540904 A0A0X1KG70 313 aa7.72□□□□□ -1.17
SNHG1-215ENST00000540904 A0A1B0GVI7 797 aa7.72□□□□□ -1.17
SNHG1-215ENST00000540904 TMEM210A6NLX4 147 aa7.72□□□□□ -1.17
SNHG1-215ENST00000540904 ZNF732B4DXR9 585 aa7.72□□□□□ -1.17
SNHG1-215ENST00000540904 F5H0A9 414 aaPredicted RBP7.72□□□□□ -1.17
SNHG1-215ENST00000540904 H0YHG0 523 aa7.72□□□□□ -1.17
SNHG1-215ENST00000540904 LGALS8O00214 317 aa7.72□□□□□ -1.17
SNHG1-215ENST00000540904 CDIPTO14735 213 aa7.72□□□□□ -1.17
SNHG1-215ENST00000540904 SYT7O43581 403 aa7.72□□□□□ -1.17
SNHG1-215ENST00000540904 FOXH1O75593 365 aa7.72□□□□□ -1.17
SNHG1-215ENST00000540904 FSTL3O95633 263 aa7.72□□□□□ -1.17
SNHG1-215ENST00000540904 NRASP01111 189 aa7.72□□□□□ -1.17
SNHG1-215ENST00000540904 IGHA1P01876 353 aa7.72□□□□□ -1.17
SNHG1-215ENST00000540904 WNT2P09544 360 aa7.72□□□□□ -1.17
SNHG1-215ENST00000540904 FAM157CP0CG43 387 aa7.72□□□□□ -1.17
SNHG1-215ENST00000540904 SRP14P37108 136 aaKnown RBP7.72□□□□□ -1.17
SNHG1-215ENST00000540904 CAPGP40121 348 aa7.72□□□□□ -1.17
SNHG1-215ENST00000540904 KIR3DL2P43630 455 aa7.72□□□□□ -1.17
SNHG1-215ENST00000540904 GMFBP60983 142 aa7.72□□□□□ -1.17
SNHG1-215ENST00000540904 ISL1P61371 349 aa7.72□□□□□ -1.17
SNHG1-215ENST00000540904 ADARB1P78563 741 aaKnown RBP7.72□□□□□ -1.17
SNHG1-215ENST00000540904 SLC34A1Q06495 639 aa7.72□□□□□ -1.17
SNHG1-215ENST00000540904 RAB40BQ12829 278 aa7.72□□□□□ -1.17
SNHG1-215ENST00000540904 GALEQ14376 348 aa7.72□□□□□ -1.17
SNHG1-215ENST00000540904 KCNJ8Q15842 424 aa7.72□□□□□ -1.17
SNHG1-215ENST00000540904 CEACAM21Q3KPI0 293 aa7.72□□□□□ -1.17
SNHG1-215ENST00000540904 KLHL22Q53GT1 634 aa7.72□□□□□ -1.17
SNHG1-215ENST00000540904 CLVS2Q5SYC1 327 aa7.72□□□□□ -1.17
SNHG1-215ENST00000540904 ZBTB37Q5TC79 503 aa7.72□□□□□ -1.17
SNHG1-215ENST00000540904 DCAF12L2Q5VW00 463 aa7.72□□□□□ -1.17
SNHG1-215ENST00000540904 LYPD2Q6UXB3 125 aa7.72□□□□□ -1.17
SNHG1-215ENST00000540904 WDR82Q6UXN9 313 aa7.72□□□□□ -1.17
SNHG1-215ENST00000540904 NLRC3Q7RTR2 1065 aa7.72□□□□□ -1.17
SNHG1-215ENST00000540904 RDH10Q8IZV5 341 aa7.72□□□□□ -1.17
SNHG1-215ENST00000540904 GCSAMQ8N6F7 178 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms