RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, human

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM65-203	ENST00000540812		A0A1B0GVI7	797 aa		13.34	□□□□□ -0.27
TRIM65-203	ENST00000540812		A0A1W2PRD5	423 aa		13.34	□□□□□ -0.27
TRIM65-203	ENST00000540812		A0A1W2PRF3	423 aa		13.34	□□□□□ -0.27
TRIM65-203	ENST00000540812		A0A1W2PRM7	423 aa		13.34	□□□□□ -0.27
TRIM65-203	ENST00000540812	ARRDC5	A6NEK1	342 aa		13.34	□□□□□ -0.27
TRIM65-203	ENST00000540812	GNGT2	O14610	69 aa		13.34	□□□□□ -0.27
TRIM65-203	ENST00000540812	CDIPT	O14735	213 aa		13.34	□□□□□ -0.27
TRIM65-203	ENST00000540812	FKBP6	O75344	327 aa		13.34	□□□□□ -0.27
TRIM65-203	ENST00000540812	TSPAN15	O95858	294 aa		13.34	□□□□□ -0.27
TRIM65-203	ENST00000540812	TFF1	P04155	84 aa		13.34	□□□□□ -0.27
TRIM65-203	ENST00000540812	SLC15A1	P46059	708 aa		13.34	□□□□□ -0.27
TRIM65-203	ENST00000540812	GSK3A	P49840	483 aa		13.34	□□□□□ -0.27
TRIM65-203	ENST00000540812	ZNF121	P58317	390 aa	Predicted RBP	13.34	□□□□□ -0.27
TRIM65-203	ENST00000540812	GMFB	P60983	142 aa		13.34	□□□□□ -0.27
TRIM65-203	ENST00000540812	KLRD1	Q13241	179 aa		13.34	□□□□□ -0.27
TRIM65-203	ENST00000540812	IKZF1	Q13422	519 aa		13.34	□□□□□ -0.27
TRIM65-203	ENST00000540812	GFOD2	Q3B7J2	385 aa		13.34	□□□□□ -0.27
TRIM65-203	ENST00000540812	C1orf146	Q5VVC0	180 aa		13.34	□□□□□ -0.27
TRIM65-203	ENST00000540812	FAM57B	Q71RH2	274 aa		13.34	□□□□□ -0.27
TRIM65-203	ENST00000540812	SLC36A1	Q7Z2H8	476 aa		13.34	□□□□□ -0.27
TRIM65-203	ENST00000540812	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	13.34	□□□□□ -0.27
TRIM65-203	ENST00000540812	OR5T2	Q8NGG2	359 aa		13.34	□□□□□ -0.27
TRIM65-203	ENST00000540812	DGCR6L	Q9BY27	220 aa		13.34	□□□□□ -0.27
TRIM65-203	ENST00000540812	TLNRD1	Q9H1K6	362 aa		13.34	□□□□□ -0.27
TRIM65-203	ENST00000540812	DPAGT1	Q9H3H5	408 aa		13.34	□□□□□ -0.27
TRIM65-203	ENST00000540812	MED20	Q9H944	212 aa		13.34	□□□□□ -0.27
TRIM65-203	ENST00000540812	FAM96B	Q9Y3D0	163 aa		13.34	□□□□□ -0.27
TRIM65-203	ENST00000540812	RNASEK-C17orf49	H0YIS7	233 aa		13.33	□□□□□ -0.28
TRIM65-203	ENST00000540812	CIB2	O75838	187 aa		13.33	□□□□□ -0.28
TRIM65-203	ENST00000540812	HSD11B1	P28845	292 aa		13.33	□□□□□ -0.28
TRIM65-203	ENST00000540812	TGM4	P49221	684 aa		13.33	□□□□□ -0.28
TRIM65-203	ENST00000540812	STUM	Q69YW2	141 aa		13.33	□□□□□ -0.28
TRIM65-203	ENST00000540812	GDPGP1	Q6ZNW5	385 aa		13.33	□□□□□ -0.28
TRIM65-203	ENST00000540812	ERI1	Q8IV48	349 aa	Known RBP	13.33	□□□□□ -0.28
TRIM65-203	ENST00000540812	PNKD	Q8N490	385 aa		13.33	□□□□□ -0.28
TRIM65-203	ENST00000540812		Q8N7P7	452 aa		13.33	□□□□□ -0.28
TRIM65-203	ENST00000540812	OR2T33	Q8NG76	320 aa		13.33	□□□□□ -0.28
TRIM65-203	ENST00000540812	OR6N2	Q8NGY6	317 aa		13.33	□□□□□ -0.28
TRIM65-203	ENST00000540812	RNF133	Q8WVZ7	376 aa		13.33	□□□□□ -0.28
TRIM65-203	ENST00000540812	UBE2F	Q969M7	185 aa		13.33	□□□□□ -0.28
TRIM65-203	ENST00000540812	ITPKC	Q96DU7	683 aa		13.33	□□□□□ -0.28
TRIM65-203	ENST00000540812	PKP2	Q99959	881 aa		13.33	□□□□□ -0.28
TRIM65-203	ENST00000540812	ABHD6	Q9BV23	337 aa		13.33	□□□□□ -0.28
TRIM65-203	ENST00000540812	PAPOLG	Q9BWT3	736 aa	Known RBP	13.33	□□□□□ -0.28
TRIM65-203	ENST00000540812	FGF23	Q9GZV9	251 aa	Predicted RBP	13.33	□□□□□ -0.28
TRIM65-203	ENST00000540812	WDR13	Q9H1Z4	485 aa		13.33	□□□□□ -0.28
TRIM65-203	ENST00000540812	TOR3A	Q9H497	397 aa		13.33	□□□□□ -0.28
TRIM65-203	ENST00000540812	TCF7L1	Q9HCS4	588 aa		13.33	□□□□□ -0.28
TRIM65-203	ENST00000540812	BRD7	Q9NPI1	651 aa		13.33	□□□□□ -0.28
TRIM65-203	ENST00000540812	SNTG1	Q9NSN8	517 aa		13.33	□□□□□ -0.28
TRIM65-203	ENST00000540812	ZNRD1	Q9P1U0	126 aa		13.33	□□□□□ -0.28
TRIM65-203	ENST00000540812	DNAJB9	Q9UBS3	223 aa		13.33	□□□□□ -0.28
TRIM65-203	ENST00000540812	BAIAP2	Q9UQB8	552 aa		13.33	□□□□□ -0.28
TRIM65-203	ENST00000540812	SLC22A31	A6NKX4	558 aa		13.32	□□□□□ -0.28
TRIM65-203	ENST00000540812	FAM183A	A6NL82	134 aa		13.32	□□□□□ -0.28
TRIM65-203	ENST00000540812	NPFF	O15130	113 aa		13.32	□□□□□ -0.28
TRIM65-203	ENST00000540812	NDUFB3	O43676	98 aa		13.32	□□□□□ -0.28
TRIM65-203	ENST00000540812	IFNG	P01579	166 aa		13.32	□□□□□ -0.28
TRIM65-203	ENST00000540812	OPRL1	P41146	370 aa		13.32	□□□□□ -0.28
TRIM65-203	ENST00000540812	NAA10	P41227	235 aa	Predicted RBP	13.32	□□□□□ -0.28
TRIM65-203	ENST00000540812	DHRS7B	Q6IAN0	325 aa	Predicted RBP	13.32	□□□□□ -0.28
TRIM65-203	ENST00000540812	METAP1D	Q6UB28	335 aa	Predicted RBP	13.32	□□□□□ -0.28
TRIM65-203	ENST00000540812	CD300LD	Q6UXZ3	194 aa		13.32	□□□□□ -0.28
TRIM65-203	ENST00000540812	IQCF1	Q8N6M8	205 aa		13.32	□□□□□ -0.28
TRIM65-203	ENST00000540812	OR10G2	Q8NGC3	310 aa		13.32	□□□□□ -0.28
TRIM65-203	ENST00000540812	GIPC3	Q8TF64	312 aa		13.32	□□□□□ -0.28
TRIM65-203	ENST00000540812	RPL3L	Q92901	407 aa	Known RBP	13.32	□□□□□ -0.28
TRIM65-203	ENST00000540812	TNFRSF14	Q92956	283 aa		13.32	□□□□□ -0.28
TRIM65-203	ENST00000540812	UTP4	Q969X6	686 aa	Known RBP	13.32	□□□□□ -0.28
TRIM65-203	ENST00000540812	C12orf43	Q96C57	262 aa	Known RBP	13.32	□□□□□ -0.28
TRIM65-203	ENST00000540812	DUS3L	Q96G46	650 aa	Known RBP	13.32	□□□□□ -0.28
TRIM65-203	ENST00000540812	INTS14	Q96SY0	518 aa		13.32	□□□□□ -0.28
TRIM65-203	ENST00000540812	DCTN5	Q9BTE1	182 aa		13.32	□□□□□ -0.28
TRIM65-203	ENST00000540812	OR10A2	Q9H208	303 aa		13.32	□□□□□ -0.28
TRIM65-203	ENST00000540812	C16orf95	Q9H693	158 aa		13.32	□□□□□ -0.28
TRIM65-203	ENST00000540812	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	13.32	□□□□□ -0.28
TRIM65-203	ENST00000540812	VPREB3	Q9UKI3	123 aa		13.32	□□□□□ -0.28
TRIM65-203	ENST00000540812		A0A0G2JK05	382 aa		13.31	□□□□□ -0.28
TRIM65-203	ENST00000540812	RIIAD1	A6NNX1	92 aa		13.31	□□□□□ -0.28
TRIM65-203	ENST00000540812	TIPRL	O75663	272 aa		13.31	□□□□□ -0.28
TRIM65-203	ENST00000540812	FBP1	P09467	338 aa		13.31	□□□□□ -0.28
TRIM65-203	ENST00000540812	ZNF3	P17036	446 aa		13.31	□□□□□ -0.28
TRIM65-203	ENST00000540812	ACKR3	P25106	362 aa		13.31	□□□□□ -0.28
TRIM65-203	ENST00000540812	GSTT1	P30711	240 aa		13.31	□□□□□ -0.28
TRIM65-203	ENST00000540812	GNAL	P38405	381 aa		13.31	□□□□□ -0.28
TRIM65-203	ENST00000540812	DGUOK	Q16854	277 aa		13.31	□□□□□ -0.28
TRIM65-203	ENST00000540812	LRRC10	Q5BKY1	277 aa		13.31	□□□□□ -0.28
TRIM65-203	ENST00000540812	ATPAF1	Q5TC12	328 aa	Predicted RBP	13.31	□□□□□ -0.28
TRIM65-203	ENST00000540812	C1QL4	Q86Z23	238 aa		13.31	□□□□□ -0.28
TRIM65-203	ENST00000540812	CMTM4	Q8IZR5	234 aa		13.31	□□□□□ -0.28
TRIM65-203	ENST00000540812	GALNT4	Q8N4A0	578 aa		13.31	□□□□□ -0.28
TRIM65-203	ENST00000540812	CSNK2A3	Q8NEV1	391 aa		13.31	□□□□□ -0.28
TRIM65-203	ENST00000540812	OR52H1	Q8NGJ2	320 aa		13.31	□□□□□ -0.28
TRIM65-203	ENST00000540812	NPRL2	Q8WTW4	380 aa		13.31	□□□□□ -0.28
TRIM65-203	ENST00000540812	LRTOMT	Q8WZ04	291 aa		13.31	□□□□□ -0.28
TRIM65-203	ENST00000540812	H1FX	Q92522	213 aa	Known RBP	13.31	□□□□□ -0.28
TRIM65-203	ENST00000540812	PGAM5	Q96HS1	289 aa		13.31	□□□□□ -0.28
TRIM65-203	ENST00000540812	GAFA1	Q96PS6	74 aa		13.31	□□□□□ -0.28
TRIM65-203	ENST00000540812	RAB3IP	Q96QF0	476 aa	Predicted RBP	13.31	□□□□□ -0.28
TRIM65-203	ENST00000540812	MICU1	Q9BPX6	476 aa		13.31	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms