RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 RCL1Q9Y2P8 373 aaKnown RBP1.3□□□□□ -2.2
MDM2-227ENST00000540709 UBN2Q6ZU65 1347 aa1.3□□□□□ -2.2
MDM2-227ENST00000540709 C15orf65H3BRN8 121 aa1.29□□□□□ -2.2
MDM2-227ENST00000540709 SYNGR2O43760 224 aa1.29□□□□□ -2.2
MDM2-227ENST00000540709 HLA-HP01893 362 aa1.29□□□□□ -2.2
MDM2-227ENST00000540709 CTRB1P17538 263 aa1.29□□□□□ -2.2
MDM2-227ENST00000540709 BMI1P35226 326 aa1.29□□□□□ -2.2
MDM2-227ENST00000540709 NUDT2P50583 147 aa1.29□□□□□ -2.2
MDM2-227ENST00000540709 RPS15P62841 145 aaKnown RBP1.29□□□□□ -2.2
MDM2-227ENST00000540709 MERTKQ12866 999 aa1.29□□□□□ -2.2
MDM2-227ENST00000540709 TRMT5Q32P41 509 aaKnown RBP1.29□□□□□ -2.2
MDM2-227ENST00000540709 C6orf99Q4VX62 202 aa1.29□□□□□ -2.2
MDM2-227ENST00000540709 TMPPEQ6ZT21 453 aa1.29□□□□□ -2.2
MDM2-227ENST00000540709 TCF24Q7RTU0 167 aa1.29□□□□□ -2.2
MDM2-227ENST00000540709 LRRC75AQ8NAA5 344 aa1.29□□□□□ -2.2
MDM2-227ENST00000540709 LY6G5BQ8NDX9 201 aa1.29□□□□□ -2.2
MDM2-227ENST00000540709 ASZ1Q8WWH4 475 aa1.29□□□□□ -2.2
MDM2-227ENST00000540709 ALS2CR12Q96Q35 445 aa1.29□□□□□ -2.2
MDM2-227ENST00000540709 SLC7A5P2Q9GIP4 190 aa1.29□□□□□ -2.2
MDM2-227ENST00000540709 OR2S2Q9NQN1 319 aa1.29□□□□□ -2.2
MDM2-227ENST00000540709 TREX1Q9NSU2 369 aa1.29□□□□□ -2.2
MDM2-227ENST00000540709 C20orf96Q9NUD7 363 aaPredicted RBP1.29□□□□□ -2.2
MDM2-227ENST00000540709 MCUBQ9NWR8 336 aa1.29□□□□□ -2.2
MDM2-227ENST00000540709 STX18Q9P2W9 335 aaKnown RBP1.29□□□□□ -2.2
MDM2-227ENST00000540709 CAB39Q9Y376 341 aaPredicted RBP1.29□□□□□ -2.2
MDM2-227ENST00000540709 COMMD3-BMI1R4GMX3 469 aa1.29□□□□□ -2.2
MDM2-227ENST00000540709 MROH5Q6ZUA9 1318 aa1.29□□□□□ -2.2
MDM2-227ENST00000540709 RPRD2Q5VT52 1461 aaKnown RBP1.29□□□□□ -2.2
MDM2-227ENST00000540709 KCNE1BA0A087WTH5 132 aa1.28□□□□□ -2.2
MDM2-227ENST00000540709 A0A0G2JMP0 313 aa1.28□□□□□ -2.2
MDM2-227ENST00000540709 A0A0X1KG70 313 aa1.28□□□□□ -2.2
MDM2-227ENST00000540709 AQP9O43315 295 aa1.28□□□□□ -2.2
MDM2-227ENST00000540709 CACNG3O60359 315 aa1.28□□□□□ -2.2
MDM2-227ENST00000540709 CDH16O75309 829 aa1.28□□□□□ -2.2
MDM2-227ENST00000540709 KCNK2O95069 426 aa1.28□□□□□ -2.2
MDM2-227ENST00000540709 ERCC1P07992 297 aaPredicted RBP1.28□□□□□ -2.2
MDM2-227ENST00000540709 OR12D2P58182 307 aa1.28□□□□□ -2.2
MDM2-227ENST00000540709 OR2B8PP59922 312 aa1.28□□□□□ -2.2
MDM2-227ENST00000540709 ZNF141Q15928 474 aa1.28□□□□□ -2.2
MDM2-227ENST00000540709 BEX5Q5H9J7 111 aa1.28□□□□□ -2.2
MDM2-227ENST00000540709 ZNF678Q5SXM1 525 aa1.28□□□□□ -2.2
MDM2-227ENST00000540709 ZNF660Q6AZW8 331 aaPredicted RBP1.28□□□□□ -2.2
MDM2-227ENST00000540709 SPNS3Q6ZMD2 512 aa1.28□□□□□ -2.2
MDM2-227ENST00000540709 TRMT10CQ7L0Y3 403 aaKnown RBP1.28□□□□□ -2.2
MDM2-227ENST00000540709 WDR31Q8NA23 367 aa1.28□□□□□ -2.2
MDM2-227ENST00000540709 ACTL9Q8TC94 416 aa1.28□□□□□ -2.2
MDM2-227ENST00000540709 JSRP1Q96MG2 331 aaPredicted RBP1.28□□□□□ -2.2
MDM2-227ENST00000540709 FANCEQ9HB96 536 aa1.28□□□□□ -2.2
MDM2-227ENST00000540709 CCNB1IP1Q9NPC3 277 aa1.28□□□□□ -2.2
MDM2-227ENST00000540709 JCADQ9P266 1359 aa1.28□□□□□ -2.2
MDM2-227ENST00000540709 THADAQ6YHU6 1953 aa1.28□□□□□ -2.2
MDM2-227ENST00000540709 NPHP4O75161 1426 aaPredicted RBP1.27□□□□□ -2.21
MDM2-227ENST00000540709 SPATA31E1Q6ZUB1 1445 aa1.27□□□□□ -2.21
MDM2-227ENST00000540709 SSH2Q76I76 1423 aa1.27□□□□□ -2.21
MDM2-227ENST00000540709 LOC102724200A0A096LPH7 203 aaPredicted RBP1.27□□□□□ -2.21
MDM2-227ENST00000540709 IZUMO1RA6ND01 250 aa1.27□□□□□ -2.21
MDM2-227ENST00000540709 ERI3O43414 337 aaKnown RBP1.27□□□□□ -2.21
MDM2-227ENST00000540709 XRCC2O43543 280 aa1.27□□□□□ -2.21
MDM2-227ENST00000540709 CCDC22O60826 627 aa1.27□□□□□ -2.21
MDM2-227ENST00000540709 UPK1BO75841 260 aa1.27□□□□□ -2.21
MDM2-227ENST00000540709 SMC2O95347 1197 aa1.27□□□□□ -2.21
MDM2-227ENST00000540709 IGHG2P01859 326 aa1.27□□□□□ -2.21
MDM2-227ENST00000540709 THRAP10827 490 aa1.27□□□□□ -2.21
MDM2-227ENST00000540709 GFAPP14136 432 aa1.27□□□□□ -2.21
MDM2-227ENST00000540709 IL3RAP26951 378 aa1.27□□□□□ -2.21
MDM2-227ENST00000540709 OR1G1P47890 313 aa1.27□□□□□ -2.21
MDM2-227ENST00000540709 RGS6P49758 472 aa1.27□□□□□ -2.21
MDM2-227ENST00000540709 ATP5G2Q06055 141 aa1.27□□□□□ -2.21
MDM2-227ENST00000540709 RCN1Q15293 331 aa1.27□□□□□ -2.21
MDM2-227ENST00000540709 TMEM236Q5W0B7 351 aa1.27□□□□□ -2.21
MDM2-227ENST00000540709 ZNF470Q6ECI4 717 aa1.27□□□□□ -2.21
MDM2-227ENST00000540709 OR2T5Q6IEZ7 315 aa1.27□□□□□ -2.21
MDM2-227ENST00000540709 ZYG11AQ6WRX3 759 aa1.27□□□□□ -2.21
MDM2-227ENST00000540709 EIF3MQ7L2H7 374 aaKnown RBP1.27□□□□□ -2.21
MDM2-227ENST00000540709 PDPNQ86YL7 162 aa1.27□□□□□ -2.21
MDM2-227ENST00000540709 RAB43Q86YS6 212 aa1.27□□□□□ -2.21
MDM2-227ENST00000540709 LRRC8AQ8IWT6 810 aa1.27□□□□□ -2.21
MDM2-227ENST00000540709 OR4C13Q8NGP0 309 aa1.27□□□□□ -2.21
MDM2-227ENST00000540709 OR2T29Q8NH02 315 aa1.27□□□□□ -2.21
MDM2-227ENST00000540709 TSEN15Q8WW01 171 aaKnown RBP1.27□□□□□ -2.21
MDM2-227ENST00000540709 S100PBPQ96BU1 408 aa1.27□□□□□ -2.21
MDM2-227ENST00000540709 YIPF6Q96EC8 236 aa1.27□□□□□ -2.21
MDM2-227ENST00000540709 DYNLL2Q96FJ2 89 aa1.27□□□□□ -2.21
MDM2-227ENST00000540709 IGF2BP2-AS1Q96M15 143 aa1.27□□□□□ -2.21
MDM2-227ENST00000540709 RDH12Q96NR8 316 aa1.27□□□□□ -2.21
MDM2-227ENST00000540709 HEBP1Q9NRV9 189 aa1.27□□□□□ -2.21
MDM2-227ENST00000540709 NLE1Q9NVX2 485 aaPredicted RBP1.27□□□□□ -2.21
MDM2-227ENST00000540709 RBFOX1Q9NWB1 397 aaKnown RBP1.27□□□□□ -2.21
MDM2-227ENST00000540709 GCNT4Q9P109 453 aa1.27□□□□□ -2.21
MDM2-227ENST00000540709 CES1P1Q9UKY3 287 aa1.27□□□□□ -2.21
MDM2-227ENST00000540709 KIAA1671Q9BY89 1806 aa1.26□□□□□ -2.21
MDM2-227ENST00000540709 A0A075B6Q4 140 aa1.26□□□□□ -2.21
MDM2-227ENST00000540709 CCL15-CCL14A0A0B4J2E2 113 aa1.26□□□□□ -2.21
MDM2-227ENST00000540709 TMEM72A0PK05 275 aa1.26□□□□□ -2.21
MDM2-227ENST00000540709 OR2AG2A6NM03 316 aa1.26□□□□□ -2.21
MDM2-227ENST00000540709 SLC19A2O60779 497 aa1.26□□□□□ -2.21
MDM2-227ENST00000540709 SNX4O95219 450 aa1.26□□□□□ -2.21
MDM2-227ENST00000540709 IFNW1P05000 195 aa1.26□□□□□ -2.21
MDM2-227ENST00000540709 CXCR1P25024 350 aa1.26□□□□□ -2.21
MDM2-227ENST00000540709 SERPINB8P50452 374 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms