RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 OR51F2Q8NH61 342 aa10.83□□□□□ -0.68
NPC1-202ENST00000540608 POC1BQ8TC44 478 aa10.83□□□□□ -0.68
NPC1-202ENST00000540608 EMG1Q92979 244 aaKnown RBP10.83□□□□□ -0.68
NPC1-202ENST00000540608 MICU1Q9BPX6 476 aa10.83□□□□□ -0.68
NPC1-202ENST00000540608 NRIP2Q9BQI9 281 aa10.83□□□□□ -0.68
NPC1-202ENST00000540608 SDK1Q7Z5N4 2213 aa10.83□□□□□ -0.68
NPC1-202ENST00000540608 FOXI3A8MTJ6 420 aaPredicted RBP10.83□□□□□ -0.68
NPC1-202ENST00000540608 SDCBPO00560 298 aaPredicted RBP10.83□□□□□ -0.68
NPC1-202ENST00000540608 RER1O15258 196 aa10.83□□□□□ -0.68
NPC1-202ENST00000540608 SNU13P55769 128 aaKnown RBP10.83□□□□□ -0.68
NPC1-202ENST00000540608 CSNK2A1P68400 391 aaPredicted RBP10.83□□□□□ -0.68
NPC1-202ENST00000540608 PLPPR5Q32ZL2 321 aa10.83□□□□□ -0.68
NPC1-202ENST00000540608 TMEM200AQ86VY9 491 aa10.83□□□□□ -0.68
NPC1-202ENST00000540608 CSNK2A3Q8NEV1 391 aa10.83□□□□□ -0.68
NPC1-202ENST00000540608 OR14K1Q8NGZ2 314 aa10.83□□□□□ -0.68
NPC1-202ENST00000540608 OR6X1Q8NH79 312 aa10.83□□□□□ -0.68
NPC1-202ENST00000540608 ZNF775Q96BV0 537 aaPredicted RBP10.83□□□□□ -0.68
NPC1-202ENST00000540608 ZNF768Q9H5H4 540 aaKnown RBP10.83□□□□□ -0.68
NPC1-202ENST00000540608 BIN3Q9NQY0 253 aa10.83□□□□□ -0.68
NPC1-202ENST00000540608 FGF21Q9NSA1 209 aa10.83□□□□□ -0.68
NPC1-202ENST00000540608 PPP4R1LQ9P1A2 415 aa10.83□□□□□ -0.68
NPC1-202ENST00000540608 GHRLQ9UBU3 117 aa10.83□□□□□ -0.68
NPC1-202ENST00000540608 EXPH5Q8NEV8 1989 aa10.83□□□□□ -0.68
NPC1-202ENST00000540608 TRAF3IP2O43734 574 aaPredicted RBP10.82□□□□□ -0.68
NPC1-202ENST00000540608 HTR3BO95264 441 aa10.82□□□□□ -0.68
NPC1-202ENST00000540608 MUC1P15941 1255 aaPredicted RBP10.82□□□□□ -0.68
NPC1-202ENST00000540608 ANOS1P23352 680 aa10.82□□□□□ -0.68
NPC1-202ENST00000540608 RPL35P42766 123 aaKnown RBP10.82□□□□□ -0.68
NPC1-202ENST00000540608 EIF3IQ13347 325 aaKnown RBP10.82□□□□□ -0.68
NPC1-202ENST00000540608 SURF2Q15527 256 aaPredicted RBP10.82□□□□□ -0.68
NPC1-202ENST00000540608 FAM57BQ71RH2 274 aa10.82□□□□□ -0.68
NPC1-202ENST00000540608 NECAB3Q96P71 396 aaPredicted RBP10.82□□□□□ -0.68
NPC1-202ENST00000540608 CHRDQ9H2X0 955 aa10.82□□□□□ -0.68
NPC1-202ENST00000540608 KLRF1Q9NZS2 232 aa10.82□□□□□ -0.68
NPC1-202ENST00000540608 GSKIPQ9P0R6 139 aa10.82□□□□□ -0.68
NPC1-202ENST00000540608 MEMO1Q9Y316 297 aa10.82□□□□□ -0.68
NPC1-202ENST00000540608 FAM96BQ9Y3D0 163 aa10.82□□□□□ -0.68
NPC1-202ENST00000540608 RNASEK-C17orf49H0YIS7 233 aa10.82□□□□□ -0.68
NPC1-202ENST00000540608 LRP3O75074 770 aa10.82□□□□□ -0.68
NPC1-202ENST00000540608 MTRF1O75570 445 aaKnown RBP10.82□□□□□ -0.68
NPC1-202ENST00000540608 PRF1P14222 555 aa10.82□□□□□ -0.68
NPC1-202ENST00000540608 PTGFRP43088 359 aa10.82□□□□□ -0.68
NPC1-202ENST00000540608 ALDH3B1P43353 468 aa10.82□□□□□ -0.68
NPC1-202ENST00000540608 AKR1D1P51857 326 aa10.82□□□□□ -0.68
NPC1-202ENST00000540608 ECH1Q13011 328 aa10.82□□□□□ -0.68
NPC1-202ENST00000540608 CARD17Q5XLA6 110 aa10.82□□□□□ -0.68
NPC1-202ENST00000540608 KMT5CQ86Y97 462 aa10.82□□□□□ -0.68
NPC1-202ENST00000540608 CADM4Q8NFZ8 388 aa10.82□□□□□ -0.68
NPC1-202ENST00000540608 GLYATL2Q8WU03 294 aa10.82□□□□□ -0.68
NPC1-202ENST00000540608 TAF9BQ9HBM6 251 aa10.82□□□□□ -0.68
NPC1-202ENST00000540608 EHFQ9NZC4 300 aa10.82□□□□□ -0.68
NPC1-202ENST00000540608 IGLV3-32A0A0A0MS00 114 aa10.82□□□□□ -0.68
NPC1-202ENST00000540608 PQLC2LA1A4F0 135 aa10.82□□□□□ -0.68
NPC1-202ENST00000540608 OPN1LWP04000 364 aa10.82□□□□□ -0.68
NPC1-202ENST00000540608 HOXB5P09067 269 aa10.82□□□□□ -0.68
NPC1-202ENST00000540608 HKR1P10072 659 aa10.82□□□□□ -0.68
NPC1-202ENST00000540608 GRB2P62993 217 aaKnown RBP10.82□□□□□ -0.68
NPC1-202ENST00000540608 SMAD4Q13485 552 aaKnown RBP10.82□□□□□ -0.68
NPC1-202ENST00000540608 KISS1Q15726 138 aa10.82□□□□□ -0.68
NPC1-202ENST00000540608 SMAD2Q15796 467 aaKnown RBP10.82□□□□□ -0.68
NPC1-202ENST00000540608 HIST3H3Q16695 136 aa10.82□□□□□ -0.68
NPC1-202ENST00000540608 RPL7L1Q6DKI1 246 aaKnown RBP10.82□□□□□ -0.68
NPC1-202ENST00000540608 ZNF283Q8N7M2 679 aa10.82□□□□□ -0.68
NPC1-202ENST00000540608 PNLDC1Q8NA58 520 aaKnown RBP10.82□□□□□ -0.68
NPC1-202ENST00000540608 DMBX1Q8NFW5 382 aa10.82□□□□□ -0.68
NPC1-202ENST00000540608 OXGR1Q96P68 337 aa10.82□□□□□ -0.68
NPC1-202ENST00000540608 IGLV3-12A0A075B6K2 115 aa10.81□□□□□ -0.68
NPC1-202ENST00000540608 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.81□□□□□ -0.68
NPC1-202ENST00000540608 PMS2P1A4D2B8 440 aa10.81□□□□□ -0.68
NPC1-202ENST00000540608 HEXBP07686 556 aa10.81□□□□□ -0.68
NPC1-202ENST00000540608 QDPRP09417 244 aa10.81□□□□□ -0.68
NPC1-202ENST00000540608 NAT2P11245 290 aa10.81□□□□□ -0.68
NPC1-202ENST00000540608 CTSSP25774 331 aa10.81□□□□□ -0.68
NPC1-202ENST00000540608 LPAR6P43657 344 aa10.81□□□□□ -0.68
NPC1-202ENST00000540608 SULT1A2P50226 295 aa10.81□□□□□ -0.68
NPC1-202ENST00000540608 S100A10P60903 97 aa10.81□□□□□ -0.68
NPC1-202ENST00000540608 PDZK1IP1Q13113 114 aa10.81□□□□□ -0.68
NPC1-202ENST00000540608 C1QL2Q7Z5L3 287 aa10.81□□□□□ -0.68
NPC1-202ENST00000540608 PECRQ9BY49 303 aa10.81□□□□□ -0.68
NPC1-202ENST00000540608 CNTNAP3Q9BZ76 1288 aa10.81□□□□□ -0.68
NPC1-202ENST00000540608 ESRP2Q9H6T0 727 aaKnown RBP10.81□□□□□ -0.68
NPC1-202ENST00000540608 TRBV11-1A0A0K0K1C0 115 aa10.81□□□□□ -0.68
NPC1-202ENST00000540608 MEX3AA1L020 520 aaKnown RBP10.81□□□□□ -0.68
NPC1-202ENST00000540608 FARS2O95363 451 aaKnown RBP10.81□□□□□ -0.68
NPC1-202ENST00000540608 IFNA2P01563 188 aa10.81□□□□□ -0.68
NPC1-202ENST00000540608 CRYBA1P05813 215 aa10.81□□□□□ -0.68
NPC1-202ENST00000540608 CD5P06127 495 aa10.81□□□□□ -0.68
NPC1-202ENST00000540608 FCGR3AP08637 254 aa10.81□□□□□ -0.68
NPC1-202ENST00000540608 IGFBP4P22692 258 aa10.81□□□□□ -0.68
NPC1-202ENST00000540608 NFYBP25208 207 aa10.81□□□□□ -0.68
NPC1-202ENST00000540608 BLVRBP30043 206 aaPredicted RBP10.81□□□□□ -0.68
NPC1-202ENST00000540608 PTGDSP41222 190 aa10.81□□□□□ -0.68
NPC1-202ENST00000540608 ZNF84P51523 738 aa10.81□□□□□ -0.68
NPC1-202ENST00000540608 CHRFAM7AQ494W8 412 aa10.81□□□□□ -0.68
NPC1-202ENST00000540608 AVPI1Q5T686 147 aa10.81□□□□□ -0.68
NPC1-202ENST00000540608 RHBDD2Q6NTF9 364 aa10.81□□□□□ -0.68
NPC1-202ENST00000540608 CRIP3Q6Q6R5 217 aa10.81□□□□□ -0.68
NPC1-202ENST00000540608 BTNL8Q6UX41 500 aa10.81□□□□□ -0.68
NPC1-202ENST00000540608 SKA3Q8IX90 412 aa10.81□□□□□ -0.68
NPC1-202ENST00000540608 SLC25A45Q8N413 288 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms