RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 PPP1R3EQ9H7J1 279 aa5.9□□□□□ -1.46
LPCAT3-209ENST00000540060 CHODLQ9H9P2 273 aa5.9□□□□□ -1.46
LPCAT3-209ENST00000540060 GCM1Q9NP62 436 aa5.9□□□□□ -1.46
LPCAT3-209ENST00000540060 FRRS1LQ9P0K9 344 aa5.9□□□□□ -1.46
LPCAT3-209ENST00000540060 CLEC2DQ9UHP7 191 aa5.9□□□□□ -1.46
LPCAT3-209ENST00000540060 CAB39Q9Y376 341 aaPredicted RBP5.9□□□□□ -1.46
LPCAT3-209ENST00000540060 NOP16Q9Y3C1 178 aaKnown RBP5.9□□□□□ -1.46
LPCAT3-209ENST00000540060 RHBDD3Q9Y3P4 386 aa5.9□□□□□ -1.46
LPCAT3-209ENST00000540060 V9GYS6 101 aa5.9□□□□□ -1.46
LPCAT3-209ENST00000540060 LOC100289279A0A1B0GTE1 492 aa5.89□□□□□ -1.47
LPCAT3-209ENST00000540060 A0A1B0GVI7 797 aa5.89□□□□□ -1.47
LPCAT3-209ENST00000540060 OR4C45A6NMZ5 311 aa5.89□□□□□ -1.47
LPCAT3-209ENST00000540060 ZNF850A8MQ14 1090 aa5.89□□□□□ -1.47
LPCAT3-209ENST00000540060 H7C1Q1 480 aa5.89□□□□□ -1.47
LPCAT3-209ENST00000540060 MYL12BO14950 172 aa5.89□□□□□ -1.47
LPCAT3-209ENST00000540060 SYT7O43581 403 aa5.89□□□□□ -1.47
LPCAT3-209ENST00000540060 DENRO43583 198 aaKnown RBP5.89□□□□□ -1.47
LPCAT3-209ENST00000540060 MTRF1O75570 445 aaKnown RBP5.89□□□□□ -1.47
LPCAT3-209ENST00000540060 LALBAP00709 142 aa5.89□□□□□ -1.47
LPCAT3-209ENST00000540060 ISG15P05161 165 aa5.89□□□□□ -1.47
LPCAT3-209ENST00000540060 CDK1P06493 297 aa5.89□□□□□ -1.47
LPCAT3-209ENST00000540060 FAHP16930 419 aa5.89□□□□□ -1.47
LPCAT3-209ENST00000540060 CRHBPP24387 322 aa5.89□□□□□ -1.47
LPCAT3-209ENST00000540060 RBMXP38159 391 aaKnown RBP5.89□□□□□ -1.47
LPCAT3-209ENST00000540060 GNALP38405 381 aa5.89□□□□□ -1.47
LPCAT3-209ENST00000540060 NR4A2P43354 598 aa5.89□□□□□ -1.47
LPCAT3-209ENST00000540060 TGM4P49221 684 aa5.89□□□□□ -1.47
LPCAT3-209ENST00000540060 SRP9P49458 86 aaKnown RBP5.89□□□□□ -1.47
LPCAT3-209ENST00000540060 GTF2A1P52655 376 aaPredicted RBP5.89□□□□□ -1.47
LPCAT3-209ENST00000540060 RIPPLY1Q0D2K3 151 aa5.89□□□□□ -1.47
LPCAT3-209ENST00000540060 PRDX4Q13162 271 aa5.89□□□□□ -1.47
LPCAT3-209ENST00000540060 MED21Q13503 144 aa5.89□□□□□ -1.47
LPCAT3-209ENST00000540060 ALKBH1Q13686 389 aaKnown RBP5.89□□□□□ -1.47
LPCAT3-209ENST00000540060 DOC2BQ14184 412 aa5.89□□□□□ -1.47
LPCAT3-209ENST00000540060 HFEQ30201 348 aa5.89□□□□□ -1.47
LPCAT3-209ENST00000540060 PRAMEF6Q5VXH4 476 aa5.89□□□□□ -1.47
LPCAT3-209ENST00000540060 RNLSQ5VYX0 342 aa5.89□□□□□ -1.47
LPCAT3-209ENST00000540060 TMEM42Q69YG0 159 aa5.89□□□□□ -1.47
LPCAT3-209ENST00000540060 TMPRSS11AQ6ZMR5 421 aa5.89□□□□□ -1.47
LPCAT3-209ENST00000540060 WDR86Q86TI4 376 aa5.89□□□□□ -1.47
LPCAT3-209ENST00000540060 STX19Q8N4C7 294 aa5.89□□□□□ -1.47
LPCAT3-209ENST00000540060 SPERTQ8NA61 448 aa5.89□□□□□ -1.47
LPCAT3-209ENST00000540060 OR14K1Q8NGZ2 314 aa5.89□□□□□ -1.47
LPCAT3-209ENST00000540060 OR10AC1Q8NH08 325 aa5.89□□□□□ -1.47
LPCAT3-209ENST00000540060 HPSE2Q8WWQ2 592 aa5.89□□□□□ -1.47
LPCAT3-209ENST00000540060 SGCDQ92629 289 aa5.89□□□□□ -1.47
LPCAT3-209ENST00000540060 REG4Q9BYZ8 158 aa5.89□□□□□ -1.47
LPCAT3-209ENST00000540060 FGF23Q9GZV9 251 aaPredicted RBP5.89□□□□□ -1.47
LPCAT3-209ENST00000540060 RASSF4Q9H2L5 321 aa5.89□□□□□ -1.47
LPCAT3-209ENST00000540060 DUSP21Q9H596 190 aa5.89□□□□□ -1.47
LPCAT3-209ENST00000540060 ABCB9Q9NP78 766 aa5.89□□□□□ -1.47
LPCAT3-209ENST00000540060 DCAF16Q9NXF7 216 aa5.89□□□□□ -1.47
LPCAT3-209ENST00000540060 UBAP1Q9NZ09 502 aa5.89□□□□□ -1.47
LPCAT3-209ENST00000540060 ENPP5Q9UJA9 477 aa5.89□□□□□ -1.47
LPCAT3-209ENST00000540060 PPP1R3CQ9UQK1 317 aa5.89□□□□□ -1.47
LPCAT3-209ENST00000540060 PIGLQ9Y2B2 252 aa5.89□□□□□ -1.47
LPCAT3-209ENST00000540060 MPC1Q9Y5U8 109 aa5.89□□□□□ -1.47
LPCAT3-209ENST00000540060 IGHV4-61A0A0C4DH41 118 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 IGHV3-64DA0A0J9YX35 117 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 TMEM212A6NML5 194 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 ANXA2P2A6NMY6 339 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 CLDN25C9JDP6 229 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 H3BSH0 61 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 J3QL48 77 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 IFNL4K9M1U5 179 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 LMX1BO60663 402 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 ZFPL1O95159 310 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 CD99P14209 185 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 THBS2P35442 1172 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 GPR6P46095 362 aaPredicted RBP5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 GBX2P52951 348 aaPredicted RBP5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 WNT4P56705 351 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 TMEM33P57088 247 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 LOXL1Q08397 574 aaPredicted RBP5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 ZNF154Q13106 437 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 IRF3Q14653 427 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 CDK5R1Q15078 307 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 MPPED2Q15777 294 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 ZNF181Q2M3W8 571 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 CCDC58Q4VC31 144 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 RBM48Q5RL73 367 aaKnown RBP5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 TMEM244Q5VVB8 128 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 RPL22L1Q6P5R6 122 aaKnown RBP5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 MOGAT3Q86VF5 341 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 ZDHHC23Q8IYP9 409 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 RDH10Q8IZV5 341 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 NANOGP1Q8N7R0 232 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 MAPK1IP1LQ8NDC0 245 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 CCDC54Q8NEL0 328 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 OR51A4Q8NGJ6 313 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 OR8S1Q8NH09 359 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 OR5AK2Q8NH90 309 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 ZNF420Q8TAQ5 688 aaPredicted RBP5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 Q8TCH9 128 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 GATAD2BQ8WXI9 593 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 OR5P3Q8WZ94 311 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 PIGCQ92535 297 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 RGP1Q92546 391 aaPredicted RBP5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 CCL17Q92583 94 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms