RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 ANGPTL7O43827 346 aa9.41□□□□□ -0.9
CLSTN3-209ENST00000539982 PEX14O75381 377 aa9.41□□□□□ -0.9
CLSTN3-209ENST00000539982 ACAA1P09110 424 aaPredicted RBP9.41□□□□□ -0.9
CLSTN3-209ENST00000539982 ZNF823P16415 610 aa9.41□□□□□ -0.9
CLSTN3-209ENST00000539982 NDUFB7P17568 137 aa9.41□□□□□ -0.9
CLSTN3-209ENST00000539982 NOS3P29474 1203 aa9.41□□□□□ -0.9
CLSTN3-209ENST00000539982 KRTAP10-11P60412 298 aa9.41□□□□□ -0.9
CLSTN3-209ENST00000539982 DGCR6Q14129 220 aa9.41□□□□□ -0.9
CLSTN3-209ENST00000539982 DGUOKQ16854 277 aa9.41□□□□□ -0.9
CLSTN3-209ENST00000539982 IFI44LQ53G44 452 aa9.41□□□□□ -0.9
CLSTN3-209ENST00000539982 C16orf89Q6UX73 402 aa9.41□□□□□ -0.9
CLSTN3-209ENST00000539982 HACD2Q6Y1H2 254 aa9.41□□□□□ -0.9
CLSTN3-209ENST00000539982 FKBP9P1Q75LS8 142 aa9.41□□□□□ -0.9
CLSTN3-209ENST00000539982 CYP4Z1Q86W10 505 aa9.41□□□□□ -0.9
CLSTN3-209ENST00000539982 OR4K13Q8NH42 304 aa9.41□□□□□ -0.9
CLSTN3-209ENST00000539982 SPSB4Q96A44 273 aa9.41□□□□□ -0.9
CLSTN3-209ENST00000539982 GAFA1Q96PS6 74 aa9.41□□□□□ -0.9
CLSTN3-209ENST00000539982 RAB3IPQ96QF0 476 aaPredicted RBP9.41□□□□□ -0.9
CLSTN3-209ENST00000539982 PRSS22Q9GZN4 317 aa9.41□□□□□ -0.9
CLSTN3-209ENST00000539982 TLNRD1Q9H1K6 362 aa9.41□□□□□ -0.9
CLSTN3-209ENST00000539982 SNTG1Q9NSN8 517 aa9.41□□□□□ -0.9
CLSTN3-209ENST00000539982 N6AMT1Q9Y5N5 214 aa9.41□□□□□ -0.9
CLSTN3-209ENST00000539982 OR6C68A6NDL8 312 aa9.4□□□□□ -0.9
CLSTN3-209ENST00000539982 VGLL3A8MV65 326 aa9.4□□□□□ -0.9
CLSTN3-209ENST00000539982 SIGLEC5O15389 551 aa9.4□□□□□ -0.9
CLSTN3-209ENST00000539982 GLCEO94923 617 aa9.4□□□□□ -0.9
CLSTN3-209ENST00000539982 DUS4LO95620 317 aaKnown RBP9.4□□□□□ -0.9
CLSTN3-209ENST00000539982 ZNF682O95780 498 aa9.4□□□□□ -0.9
CLSTN3-209ENST00000539982 H1F0P07305 194 aaKnown RBP9.4□□□□□ -0.9
CLSTN3-209ENST00000539982 HIST1H1CP16403 213 aaKnown RBP9.4□□□□□ -0.9
CLSTN3-209ENST00000539982 PAICSP22234 425 aaKnown RBP9.4□□□□□ -0.9
CLSTN3-209ENST00000539982 PRKXP51817 358 aa9.4□□□□□ -0.9
CLSTN3-209ENST00000539982 GMFBP60983 142 aa9.4□□□□□ -0.9
CLSTN3-209ENST00000539982 SLC35A2P78381 396 aa9.4□□□□□ -0.9
CLSTN3-209ENST00000539982 FAM3AP98173 230 aa9.4□□□□□ -0.9
CLSTN3-209ENST00000539982 CD83Q01151 205 aa9.4□□□□□ -0.9
CLSTN3-209ENST00000539982 CBLL1Q75N03 491 aa9.4□□□□□ -0.9
CLSTN3-209ENST00000539982 CYB561A3Q8NBI2 242 aa9.4□□□□□ -0.9
CLSTN3-209ENST00000539982 OR4C15Q8NGM1 316 aa9.4□□□□□ -0.9
CLSTN3-209ENST00000539982 OR10Z1Q8NGY1 313 aa9.4□□□□□ -0.9
CLSTN3-209ENST00000539982 ANGPTL6Q8NI99 470 aa9.4□□□□□ -0.9
CLSTN3-209ENST00000539982 RCC1LQ96I51 464 aaKnown RBP9.4□□□□□ -0.9
CLSTN3-209ENST00000539982 KCNJ15Q99712 375 aa9.4□□□□□ -0.9
CLSTN3-209ENST00000539982 WDR13Q9H1Z4 485 aa9.4□□□□□ -0.9
CLSTN3-209ENST00000539982 HEXA-AS1Q9H8Q6 139 aa9.4□□□□□ -0.9
CLSTN3-209ENST00000539982 RRP15Q9Y3B9 282 aaKnown RBP9.4□□□□□ -0.9
CLSTN3-209ENST00000539982 ENPP4Q9Y6X5 453 aa9.4□□□□□ -0.9
CLSTN3-209ENST00000539982 DNAH9Q9NYC9 4486 aa9.39□□□□□ -0.91
CLSTN3-209ENST00000539982 TRBV23-1A0A0A0MS06 115 aa9.39□□□□□ -0.91
CLSTN3-209ENST00000539982 A0A1W2PRX2 142 aa9.39□□□□□ -0.91
CLSTN3-209ENST00000539982 GSC2O15499 205 aa9.39□□□□□ -0.91
CLSTN3-209ENST00000539982 TFF1P04155 84 aa9.39□□□□□ -0.91
CLSTN3-209ENST00000539982 PF4V1P10720 104 aa9.39□□□□□ -0.91
CLSTN3-209ENST00000539982 SLC2A1P11166 492 aa9.39□□□□□ -0.91
CLSTN3-209ENST00000539982 RPS27P42677 84 aaKnown RBP9.39□□□□□ -0.91
CLSTN3-209ENST00000539982 RAB13P51153 203 aa9.39□□□□□ -0.91
CLSTN3-209ENST00000539982 SLC7A2P52569 658 aa9.39□□□□□ -0.91
CLSTN3-209ENST00000539982 LGALS4P56470 323 aa9.39□□□□□ -0.91
CLSTN3-209ENST00000539982 EGFEM1PQ0D2K5 195 aa9.39□□□□□ -0.91
CLSTN3-209ENST00000539982 CNN3Q15417 329 aaKnown RBP9.39□□□□□ -0.91
CLSTN3-209ENST00000539982 TAF13Q15543 124 aa9.39□□□□□ -0.91
CLSTN3-209ENST00000539982 SLC16A9Q7RTY1 509 aa9.39□□□□□ -0.91
CLSTN3-209ENST00000539982 MKXQ8IYA7 352 aa9.39□□□□□ -0.91
CLSTN3-209ENST00000539982 PGAM4Q8N0Y7 254 aa9.39□□□□□ -0.91
CLSTN3-209ENST00000539982 ARHGAP24Q8N264 748 aa9.39□□□□□ -0.91
CLSTN3-209ENST00000539982 MCUR1Q96AQ8 359 aa9.39□□□□□ -0.91
CLSTN3-209ENST00000539982 SGK3Q96BR1 496 aa9.39□□□□□ -0.91
CLSTN3-209ENST00000539982 HSH2DQ96JZ2 352 aa9.39□□□□□ -0.91
CLSTN3-209ENST00000539982 OR5M11Q96RB7 305 aa9.39□□□□□ -0.91
CLSTN3-209ENST00000539982 COPS4Q9BT78 406 aa9.39□□□□□ -0.91
CLSTN3-209ENST00000539982 CADM1Q9BY67 442 aaKnown RBP9.39□□□□□ -0.91
CLSTN3-209ENST00000539982 FN3KQ9H479 309 aa9.39□□□□□ -0.91
CLSTN3-209ENST00000539982 PPP1R3EQ9H7J1 279 aa9.39□□□□□ -0.91
CLSTN3-209ENST00000539982 KRCC1Q9NPI7 259 aaPredicted RBP9.39□□□□□ -0.91
CLSTN3-209ENST00000539982 GID8Q9NWU2 228 aa9.39□□□□□ -0.91
CLSTN3-209ENST00000539982 TCF19Q9Y242 345 aa9.39□□□□□ -0.91
CLSTN3-209ENST00000539982 A6NDX4 124 aa9.38□□□□□ -0.91
CLSTN3-209ENST00000539982 OR2AT4A6NND4 320 aa9.38□□□□□ -0.91
CLSTN3-209ENST00000539982 E9PQ18 207 aa9.38□□□□□ -0.91
CLSTN3-209ENST00000539982 TBX1O43435 398 aa9.38□□□□□ -0.91
CLSTN3-209ENST00000539982 IDH3BO43837 385 aa9.38□□□□□ -0.91
CLSTN3-209ENST00000539982 SLC6A6P31641 620 aa9.38□□□□□ -0.91
CLSTN3-209ENST00000539982 GNALP38405 381 aa9.38□□□□□ -0.91
CLSTN3-209ENST00000539982 IL5RAQ01344 420 aa9.38□□□□□ -0.91
CLSTN3-209ENST00000539982 SPIBQ01892 262 aa9.38□□□□□ -0.91
CLSTN3-209ENST00000539982 COL10A1Q03692 680 aa9.38□□□□□ -0.91
CLSTN3-209ENST00000539982 SEC23BQ15437 767 aa9.38□□□□□ -0.91
CLSTN3-209ENST00000539982 FGD3Q5JSP0 725 aa9.38□□□□□ -0.91
CLSTN3-209ENST00000539982 DCXRQ7Z4W1 244 aa9.38□□□□□ -0.91
CLSTN3-209ENST00000539982 ZDHHC21Q8IVQ6 265 aa9.38□□□□□ -0.91
CLSTN3-209ENST00000539982 DEFB107AQ8IZN7 70 aa9.38□□□□□ -0.91
CLSTN3-209ENST00000539982 FAM185AQ8N0U4 392 aa9.38□□□□□ -0.91
CLSTN3-209ENST00000539982 OR5AU1Q8NGC0 362 aa9.38□□□□□ -0.91
CLSTN3-209ENST00000539982 OR5K1Q8NHB7 308 aa9.38□□□□□ -0.91
CLSTN3-209ENST00000539982 SLAMF6Q96DU3 332 aa9.38□□□□□ -0.91
CLSTN3-209ENST00000539982 MICU1Q9BPX6 476 aa9.38□□□□□ -0.91
CLSTN3-209ENST00000539982 HOPXQ9BPY8 73 aaPredicted RBP9.38□□□□□ -0.91
CLSTN3-209ENST00000539982 THTPAQ9BU02 230 aa9.38□□□□□ -0.91
CLSTN3-209ENST00000539982 IFT27Q9BW83 186 aa9.38□□□□□ -0.91
CLSTN3-209ENST00000539982 OR52D1Q9H346 318 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms