RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 BIVMQ86UB2 503 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 TMEM200AQ86VY9 491 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 HOGA1Q86XE5 327 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 PLXDC1Q8IUK5 500 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 CBLN2Q8IUK8 224 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 SFTPA2Q8IWL1 248 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 ARRDC1Q8N5I2 433 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 OR51L1Q8NGJ5 315 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 ADAMTS18Q8TE60 1221 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 C3orf49Q96BT1 292 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 PTCHD1Q96NR3 888 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 MACROD1Q9BQ69 325 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 CMSS1Q9BQ75 279 aaKnown RBP6.78□□□□□ -1.32
CCDC60-204ENST00000539847 ZMAT4Q9H898 229 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 FKRPQ9H9S5 495 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 ZNF71Q9NQZ8 489 aaPredicted RBP6.78□□□□□ -1.32
CCDC60-204ENST00000539847 OCIAD1Q9NX40 245 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 ZNF230Q9UIE0 474 aaPredicted RBP6.78□□□□□ -1.32
CCDC60-204ENST00000539847 GTF2A1LQ9UNN4 478 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 DHDHQ9UQ10 334 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 VSIG4Q9Y279 399 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 ADAM18Q9Y3Q7 739 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 DMRT1Q9Y5R6 373 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 MDC1Q14676 2089 aaKnown RBP6.78□□□□□ -1.32
CCDC60-204ENST00000539847 POLEQ07864 2286 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 IGKV1D-42A0A075B6H8 117 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 KIR2DS5A0A0G2JLQ3 304 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 A0A0G2JNG1 304 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 LOC101059948A0A1B0GTJ6 334 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 LILRA5A6NI73 299 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 ZNF729A6NN14 1252 aaPredicted RBP6.77□□□□□ -1.33
CCDC60-204ENST00000539847 C21orf140B9A014 251 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 KIR2DS3K7RE56 304 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 FOXS1O43638 330 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 CTSVO60911 334 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 JTBO76095 146 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 RPP14O95059 124 aaKnown RBP6.77□□□□□ -1.33
CCDC60-204ENST00000539847 CST4P01036 141 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 IGHV2-70P01814 119 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 FBP1P09467 338 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 PRF1P14222 555 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 PGAM2P15259 253 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 CD40P25942 277 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 HSD11B1P28845 292 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 GLP1RP43220 463 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 MAGEB1P43366 347 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 EMDP50402 254 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 RAB5CP51148 216 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 ARHGDIBP52566 201 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 SUCLG1P53597 346 aaKnown RBP6.77□□□□□ -1.33
CCDC60-204ENST00000539847 F2RL1P55085 397 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 RAB38P57729 211 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 SNRPEP62304 92 aaKnown RBP6.77□□□□□ -1.33
CCDC60-204ENST00000539847 IGLV3-21P80748 117 aaPredicted RBP6.77□□□□□ -1.33
CCDC60-204ENST00000539847 FAM3AP98173 230 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 PSG6Q00889 435 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 HHEXQ03014 270 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 PLA2G7Q13093 441 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 PPP1R1AQ13522 171 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 GPR18Q14330 331 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 KIR2DS5Q14953 304 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 SURF2Q15527 256 aaPredicted RBP6.77□□□□□ -1.33
CCDC60-204ENST00000539847 TOMM34Q15785 309 aaPredicted RBP6.77□□□□□ -1.33
CCDC60-204ENST00000539847 SGCAQ16586 387 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 DEFB109BQ30KR1 87 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 WDR38Q5JTN6 314 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 OR10K2Q6IF99 312 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 FIGLAQ6QHK4 219 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 HIST2H3AQ71DI3 136 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 TMED4Q7Z7H5 227 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 ZAR1Q86SH2 424 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 NAA40Q86UY6 237 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 CATSPERDQ86XM0 798 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 OR8S1Q8NH09 359 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 TERB2Q8NHR7 220 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 FLVCR1-AS1Q8TAF5 88 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 NANPQ8TBE9 248 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 SLC37A2Q8TED4 501 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 PAQR8Q8TEZ7 354 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 ASB5Q8WWX0 329 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 LCN9Q8WX39 176 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 DVL3Q92997 716 aaPredicted RBP6.77□□□□□ -1.33
CCDC60-204ENST00000539847 HIST1H2BAQ96A08 127 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 FAM46BQ96A09 425 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 ANKRD9Q96BM1 317 aaPredicted RBP6.77□□□□□ -1.33
CCDC60-204ENST00000539847 RASD2Q96D21 266 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 C2orf50Q96LR7 162 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 VSTM2LQ96N03 204 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 NRTNQ99748 197 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 MICU1Q9BPX6 476 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 NUDT9Q9BW91 350 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 CST11Q9H112 138 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 ELOVL3Q9HB03 270 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 Q9N2J8 555 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 VSX1Q9NZR4 365 aaPredicted RBP6.77□□□□□ -1.33
CCDC60-204ENST00000539847 GRHPRQ9UBQ7 328 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 CACFD1Q9UGQ2 172 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 IKZF2Q9UKS7 526 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 HHLA2Q9UM44 414 aa6.77□□□□□ -1.33
CCDC60-204ENST00000539847 TP53TG5Q9Y2B4 290 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms