RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 OIT3Q8WWZ8 545 aa17.9■□□□□ 0.46
TMEM260-203ENST00000539559 SHDQ96IW2 340 aa17.9■□□□□ 0.46
TMEM260-203ENST00000539559 CHST11Q9NPF2 352 aa17.9■□□□□ 0.46
TMEM260-203ENST00000539559 ASH2LQ9UBL3 628 aa17.9■□□□□ 0.46
TMEM260-203ENST00000539559 SRPK3Q9UPE1 567 aa17.9■□□□□ 0.46
TMEM260-203ENST00000539559 IGKV1D-8A0A087WSZ0 117 aa17.89■□□□□ 0.45
TMEM260-203ENST00000539559 ARPC4-TTLL3A0A0A6YYG9 625 aa17.89■□□□□ 0.45
TMEM260-203ENST00000539559 TLCD2A6NGC4 264 aa17.89■□□□□ 0.45
TMEM260-203ENST00000539559 HKR1P10072 659 aa17.89■□□□□ 0.45
TMEM260-203ENST00000539559 RPS2P15880 293 aaKnown RBP17.89■□□□□ 0.45
TMEM260-203ENST00000539559 CPT2P23786 658 aa17.89■□□□□ 0.45
TMEM260-203ENST00000539559 FAM76BQ5HYJ3 339 aa17.89■□□□□ 0.45
TMEM260-203ENST00000539559 VAX1Q5SQQ9 334 aa17.89■□□□□ 0.45
TMEM260-203ENST00000539559 CDCP2Q5VXM1 449 aa17.89■□□□□ 0.45
TMEM260-203ENST00000539559 ZNF529Q6P280 563 aa17.89■□□□□ 0.45
TMEM260-203ENST00000539559 NECAB3Q96P71 396 aaPredicted RBP17.89■□□□□ 0.45
TMEM260-203ENST00000539559 IGKV1-9A0A0C4DH69 117 aa17.89■□□□□ 0.45
TMEM260-203ENST00000539559 LINC00587B1AMM8 73 aa17.89■□□□□ 0.45
TMEM260-203ENST00000539559 EFNA2O43921 213 aa17.89■□□□□ 0.45
TMEM260-203ENST00000539559 FPR2P25090 351 aa17.89■□□□□ 0.45
TMEM260-203ENST00000539559 FAM57BQ71RH2 274 aa17.89■□□□□ 0.45
TMEM260-203ENST00000539559 ARRDC1Q8N5I2 433 aa17.89■□□□□ 0.45
TMEM260-203ENST00000539559 OR51T1Q8NGJ9 327 aa17.89■□□□□ 0.45
TMEM260-203ENST00000539559 RPS10P5Q9NQ39 176 aa17.89■□□□□ 0.45
TMEM260-203ENST00000539559 SERINC1Q9NRX5 453 aa17.89■□□□□ 0.45
TMEM260-203ENST00000539559 TO15178 435 aa17.88■□□□□ 0.45
TMEM260-203ENST00000539559 SCGB1D2O95969 90 aa17.88■□□□□ 0.45
TMEM260-203ENST00000539559 CHRM2P08172 466 aa17.88■□□□□ 0.45
TMEM260-203ENST00000539559 FCGR3AP08637 254 aa17.88■□□□□ 0.45
TMEM260-203ENST00000539559 KLK2P20151 261 aa17.88■□□□□ 0.45
TMEM260-203ENST00000539559 FASLGP48023 281 aa17.88■□□□□ 0.45
TMEM260-203ENST00000539559 STARD6P59095 220 aa17.88■□□□□ 0.45
TMEM260-203ENST00000539559 MISPQ8IVT2 679 aa17.88■□□□□ 0.45
TMEM260-203ENST00000539559 BSCL2Q96G97 398 aaPredicted RBP17.88■□□□□ 0.45
TMEM260-203ENST00000539559 WNT16Q9UBV4 365 aa17.88■□□□□ 0.45
TMEM260-203ENST00000539559 WIF1Q9Y5W5 379 aa17.88■□□□□ 0.45
TMEM260-203ENST00000539559 MFNGO00587 321 aa17.88■□□□□ 0.45
TMEM260-203ENST00000539559 GSTP1P09211 210 aaKnown RBP17.88■□□□□ 0.45
TMEM260-203ENST00000539559 ZNF708P17019 499 aa17.88■□□□□ 0.45
TMEM260-203ENST00000539559 FBLP22087 321 aaKnown RBP17.88■□□□□ 0.45
TMEM260-203ENST00000539559 PTGER4P35408 488 aa17.88■□□□□ 0.45
TMEM260-203ENST00000539559 IAH1Q2TAA2 248 aaPredicted RBP17.88■□□□□ 0.45
TMEM260-203ENST00000539559 CADM4Q8NFZ8 388 aa17.88■□□□□ 0.45
TMEM260-203ENST00000539559 KCNG3Q8TAE7 436 aa17.88■□□□□ 0.45
TMEM260-203ENST00000539559 KIRREL1Q96J84 757 aa17.88■□□□□ 0.45
TMEM260-203ENST00000539559 OSGIN2Q9Y236 505 aa17.88■□□□□ 0.45
TMEM260-203ENST00000539559 LSM5Q9Y4Y9 91 aaKnown RBP17.88■□□□□ 0.45
TMEM260-203ENST00000539559 H3BMH7 237 aa17.87■□□□□ 0.45
TMEM260-203ENST00000539559 LYL1P12980 280 aa17.87■□□□□ 0.45
TMEM260-203ENST00000539559 FOLR1P15328 257 aa17.87■□□□□ 0.45
TMEM260-203ENST00000539559 LAP3P28838 519 aa17.87■□□□□ 0.45
TMEM260-203ENST00000539559 ACY1Q03154 408 aa17.87■□□□□ 0.45
TMEM260-203ENST00000539559 HDHD3Q9BSH5 251 aaPredicted RBP17.87■□□□□ 0.45
TMEM260-203ENST00000539559 PCED1AQ9H1Q7 454 aa17.87■□□□□ 0.45
TMEM260-203ENST00000539559 ZNF701Q9NV72 531 aaPredicted RBP17.87■□□□□ 0.45
TMEM260-203ENST00000539559 B3GAT1Q9P2W7 334 aa17.87■□□□□ 0.45
TMEM260-203ENST00000539559 FBXL17Q9UF56 701 aa17.87■□□□□ 0.45
TMEM260-203ENST00000539559 A0A1B0GV50 99 aa17.87■□□□□ 0.45
TMEM260-203ENST00000539559 A0A1W2PNR3 127 aa17.87■□□□□ 0.45
TMEM260-203ENST00000539559 SNRNP70P08621 437 aaKnown RBP17.87■□□□□ 0.45
TMEM260-203ENST00000539559 ZNF806P0C7X5 589 aa17.87■□□□□ 0.45
TMEM260-203ENST00000539559 GLI4P10075 376 aa17.87■□□□□ 0.45
TMEM260-203ENST00000539559 NME1P15531 152 aaKnown RBP17.87■□□□□ 0.45
TMEM260-203ENST00000539559 SERPINA2P20848 420 aa17.87■□□□□ 0.45
TMEM260-203ENST00000539559 ARL4DP49703 201 aa17.87■□□□□ 0.45
TMEM260-203ENST00000539559 OR1D5P58170 312 aa17.87■□□□□ 0.45
TMEM260-203ENST00000539559 BTNL8Q6UX41 500 aa17.87■□□□□ 0.45
TMEM260-203ENST00000539559 PEG10Q86TG7 708 aaKnown RBP17.87■□□□□ 0.45
TMEM260-203ENST00000539559 DTX1Q86Y01 620 aa17.87■□□□□ 0.45
TMEM260-203ENST00000539559 ELL3Q9HB65 397 aaPredicted RBP17.87■□□□□ 0.45
TMEM260-203ENST00000539559 A0A1W2PR77 199 aa17.86■□□□□ 0.45
TMEM260-203ENST00000539559 NUDT19A8MXV4 375 aa17.86■□□□□ 0.45
TMEM260-203ENST00000539559 SGCEO43556 437 aa17.86■□□□□ 0.45
TMEM260-203ENST00000539559 RAMP1O60894 148 aa17.86■□□□□ 0.45
TMEM260-203ENST00000539559 CD5P06127 495 aa17.86■□□□□ 0.45
TMEM260-203ENST00000539559 HEXAP06865 529 aa17.86■□□□□ 0.45
TMEM260-203ENST00000539559 BLVRBP30043 206 aaPredicted RBP17.86■□□□□ 0.45
TMEM260-203ENST00000539559 FHITP49789 147 aa17.86■□□□□ 0.45
TMEM260-203ENST00000539559 IL15RAQ13261 267 aa17.86■□□□□ 0.45
TMEM260-203ENST00000539559 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.86■□□□□ 0.45
TMEM260-203ENST00000539559 LHFPL1Q86WI0 220 aa17.86■□□□□ 0.45
TMEM260-203ENST00000539559 GKN2Q86XP6 184 aa17.86■□□□□ 0.45
TMEM260-203ENST00000539559 ZNF441Q8N8Z8 693 aa17.86■□□□□ 0.45
TMEM260-203ENST00000539559 MFSD8Q8NHS3 518 aa17.86■□□□□ 0.45
TMEM260-203ENST00000539559 TMEM234Q8WY98 164 aa17.86■□□□□ 0.45
TMEM260-203ENST00000539559 SAT2Q96F10 170 aaPredicted RBP17.86■□□□□ 0.45
TMEM260-203ENST00000539559 IP6K3Q96PC2 410 aa17.86■□□□□ 0.45
TMEM260-203ENST00000539559 AMDHD2Q9Y303 409 aa17.86■□□□□ 0.45
TMEM260-203ENST00000539559 ZNF814B7Z6K7 855 aa17.86■□□□□ 0.45
TMEM260-203ENST00000539559 NME2P1O60361 137 aa17.86■□□□□ 0.45
TMEM260-203ENST00000539559 ADH6P28332 368 aa17.86■□□□□ 0.45
TMEM260-203ENST00000539559 RPL12P30050 165 aaKnown RBP17.86■□□□□ 0.45
TMEM260-203ENST00000539559 CLRN1P58418 232 aa17.86■□□□□ 0.45
TMEM260-203ENST00000539559 Q7L0L9 218 aa17.86■□□□□ 0.45
TMEM260-203ENST00000539559 OR2AJ1Q8NGZ0 328 aa17.86■□□□□ 0.45
TMEM260-203ENST00000539559 RALGAPA1Q6GYQ0 2036 aa17.86■□□□□ 0.45
TMEM260-203ENST00000539559 FAM157AC9JC47 383 aa17.85■□□□□ 0.45
TMEM260-203ENST00000539559 SCGNO76038 276 aa17.85■□□□□ 0.45
TMEM260-203ENST00000539559 HPNP05981 417 aa17.85■□□□□ 0.45
TMEM260-203ENST00000539559 ZNF44P15621 663 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms