RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 C10orf35Q96D05 121 aa12.13□□□□□ -0.47
CD4-208ENST00000538827 NKX3-1Q99801 234 aaPredicted RBP12.13□□□□□ -0.47
CD4-208ENST00000538827 SYT3Q9BQG1 590 aa12.13□□□□□ -0.47
CD4-208ENST00000538827 PTTG2Q9NZH5 202 aa12.13□□□□□ -0.47
CD4-208ENST00000538827 PURGQ9UJV8 347 aaKnown RBP12.13□□□□□ -0.47
CD4-208ENST00000538827 RHBDD3Q9Y3P4 386 aa12.13□□□□□ -0.47
CD4-208ENST00000538827 RNF115Q9Y4L5 304 aa12.13□□□□□ -0.47
CD4-208ENST00000538827 SPG11Q96JI7 2443 aa12.12□□□□□ -0.47
CD4-208ENST00000538827 PRSS44E7EML9 344 aa12.12□□□□□ -0.47
CD4-208ENST00000538827 MAGEB3O15480 346 aa12.12□□□□□ -0.47
CD4-208ENST00000538827 NRASP01111 189 aa12.12□□□□□ -0.47
CD4-208ENST00000538827 ATF1P18846 271 aa12.12□□□□□ -0.47
CD4-208ENST00000538827 TUBG1P23258 451 aa12.12□□□□□ -0.47
CD4-208ENST00000538827 AZGP1P25311 298 aaKnown RBP12.12□□□□□ -0.47
CD4-208ENST00000538827 BDKRB2P30411 391 aa12.12□□□□□ -0.47
CD4-208ENST00000538827 GLRXP35754 106 aa12.12□□□□□ -0.47
CD4-208ENST00000538827 KLF3P57682 345 aaPredicted RBP12.12□□□□□ -0.47
CD4-208ENST00000538827 NKX6-1P78426 367 aaPredicted RBP12.12□□□□□ -0.47
CD4-208ENST00000538827 ALKBH6Q3KRA9 238 aa12.12□□□□□ -0.47
CD4-208ENST00000538827 HES5Q5TA89 166 aa12.12□□□□□ -0.47
CD4-208ENST00000538827 ZBTB37Q5TC79 503 aa12.12□□□□□ -0.47
CD4-208ENST00000538827 MEX3BQ6ZN04 569 aaKnown RBP12.12□□□□□ -0.47
CD4-208ENST00000538827 C1orf174Q8IYL3 243 aa12.12□□□□□ -0.47
CD4-208ENST00000538827 ZDHHC23Q8IYP9 409 aa12.12□□□□□ -0.47
CD4-208ENST00000538827 JAGN1Q8N5M9 183 aa12.12□□□□□ -0.47
CD4-208ENST00000538827 NKAIN3Q8N8D7 197 aa12.12□□□□□ -0.47
CD4-208ENST00000538827 NUP37Q8NFH4 326 aa12.12□□□□□ -0.47
CD4-208ENST00000538827 SYNPRQ8TBG9 265 aa12.12□□□□□ -0.47
CD4-208ENST00000538827 UBASH3BQ8TF42 649 aa12.12□□□□□ -0.47
CD4-208ENST00000538827 ADAT1Q9BUB4 502 aaKnown RBP12.12□□□□□ -0.47
CD4-208ENST00000538827 PPP1R3EQ9H7J1 279 aa12.12□□□□□ -0.47
CD4-208ENST00000538827 TUBG2Q9NRH3 451 aa12.12□□□□□ -0.47
CD4-208ENST00000538827 DUSP13Q9UII6 198 aa12.12□□□□□ -0.47
CD4-208ENST00000538827 CADP27708 2225 aa12.12□□□□□ -0.47
CD4-208ENST00000538827 FAM230AA0A1W2PPH8 454 aa12.11□□□□□ -0.47
CD4-208ENST00000538827 IQCF6A8MYZ5 107 aa12.11□□□□□ -0.47
CD4-208ENST00000538827 SIAH2O43255 324 aa12.11□□□□□ -0.47
CD4-208ENST00000538827 LILRA1O75019 489 aa12.11□□□□□ -0.47
CD4-208ENST00000538827 ERCC1P07992 297 aaPredicted RBP12.11□□□□□ -0.47
CD4-208ENST00000538827 ADRA2CP18825 462 aa12.11□□□□□ -0.47
CD4-208ENST00000538827 RORCP51449 518 aa12.11□□□□□ -0.47
CD4-208ENST00000538827 PSG7Q13046 419 aa12.11□□□□□ -0.47
CD4-208ENST00000538827 MSMPQ1L6U9 139 aa12.11□□□□□ -0.47
CD4-208ENST00000538827 TMEM255AQ5JRV8 349 aa12.11□□□□□ -0.47
CD4-208ENST00000538827 IDNKQ5T6J7 187 aa12.11□□□□□ -0.47
CD4-208ENST00000538827 MBNL2Q5VZF2 373 aaKnown RBP12.11□□□□□ -0.47
CD4-208ENST00000538827 GLT8D1Q68CQ7 371 aa12.11□□□□□ -0.47
CD4-208ENST00000538827 SP5Q6BEB4 398 aaPredicted RBP12.11□□□□□ -0.47
CD4-208ENST00000538827 SFXN4Q6P4A7 337 aa12.11□□□□□ -0.47
CD4-208ENST00000538827 UTS2BQ765I0 119 aa12.11□□□□□ -0.47
CD4-208ENST00000538827 DMRTC2Q8IXT2 367 aaPredicted RBP12.11□□□□□ -0.47
CD4-208ENST00000538827 FAM222BQ8WU58 562 aa12.11□□□□□ -0.47
CD4-208ENST00000538827 TMEM171Q8WVE6 324 aa12.11□□□□□ -0.47
CD4-208ENST00000538827 NEUROG1Q92886 237 aa12.11□□□□□ -0.47
CD4-208ENST00000538827 RFT1Q96AA3 541 aa12.11□□□□□ -0.47
CD4-208ENST00000538827 SLC25A46Q96AG3 418 aa12.11□□□□□ -0.47
CD4-208ENST00000538827 HAVCR1Q96D42 359 aa12.11□□□□□ -0.47
CD4-208ENST00000538827 SPACA5Q96QH8 159 aa12.11□□□□□ -0.47
CD4-208ENST00000538827 GFI1Q99684 422 aa12.11□□□□□ -0.47
CD4-208ENST00000538827 PLGRKTQ9HBL7 147 aa12.11□□□□□ -0.47
CD4-208ENST00000538827 NEK6Q9HC98 313 aa12.11□□□□□ -0.47
CD4-208ENST00000538827 TMEM138Q9NPI0 162 aa12.11□□□□□ -0.47
CD4-208ENST00000538827 CA10Q9NS85 328 aa12.11□□□□□ -0.47
CD4-208ENST00000538827 CGGBP1Q9UFW8 167 aaPredicted RBP12.11□□□□□ -0.47
CD4-208ENST00000538827 DAPK2Q9UIK4 370 aa12.11□□□□□ -0.47
CD4-208ENST00000538827 SLC7A11Q9UPY5 501 aa12.11□□□□□ -0.47
CD4-208ENST00000538827 CMAHPQ9Y471 501 aa12.11□□□□□ -0.47
CD4-208ENST00000538827 V9GY05 133 aa12.11□□□□□ -0.47
CD4-208ENST00000538827 CSMD2Q7Z408 3487 aa12.1□□□□□ -0.47
CD4-208ENST00000538827 A0A0G2JK05 382 aa12.1□□□□□ -0.47
CD4-208ENST00000538827 TRIM64BA6NI03 449 aa12.1□□□□□ -0.47
CD4-208ENST00000538827 NOTOA8MTQ0 251 aa12.1□□□□□ -0.47
CD4-208ENST00000538827 DEFB108AA8MXU0 73 aa12.1□□□□□ -0.47
CD4-208ENST00000538827 SHISA9B4DS77 424 aa12.1□□□□□ -0.47
CD4-208ENST00000538827 GMDSO60547 372 aa12.1□□□□□ -0.47
CD4-208ENST00000538827 PLAUP00749 431 aa12.1□□□□□ -0.47
CD4-208ENST00000538827 CST4P01036 141 aa12.1□□□□□ -0.47
CD4-208ENST00000538827 SLC2A2P11168 524 aaPredicted RBP12.1□□□□□ -0.47
CD4-208ENST00000538827 CA6P23280 308 aa12.1□□□□□ -0.47
CD4-208ENST00000538827 SELENOVP59797 346 aa12.1□□□□□ -0.47
CD4-208ENST00000538827 UBE2V2Q15819 145 aa12.1□□□□□ -0.47
CD4-208ENST00000538827 LRP11Q86VZ4 500 aa12.1□□□□□ -0.47
CD4-208ENST00000538827 NR2C2APQ86WQ0 139 aa12.1□□□□□ -0.47
CD4-208ENST00000538827 OR52N4Q8NGI2 321 aa12.1□□□□□ -0.47
CD4-208ENST00000538827 OR8S1Q8NH09 359 aa12.1□□□□□ -0.47
CD4-208ENST00000538827 MCFD2Q8NI22 146 aa12.1□□□□□ -0.47
CD4-208ENST00000538827 BORCS8Q96FH0 119 aa12.1□□□□□ -0.47
CD4-208ENST00000538827 HS3ST6Q96QI5 342 aa12.1□□□□□ -0.47
CD4-208ENST00000538827 HIST1H2AAQ96QV6 131 aa12.1□□□□□ -0.47
CD4-208ENST00000538827 GPER1Q99527 375 aa12.1□□□□□ -0.47
CD4-208ENST00000538827 SLC30A2Q9BRI3 323 aa12.1□□□□□ -0.47
CD4-208ENST00000538827 BARHL1Q9BZE3 327 aa12.1□□□□□ -0.47
CD4-208ENST00000538827 C6orf62Q9GZU0 229 aaPredicted RBP12.1□□□□□ -0.47
CD4-208ENST00000538827 SMURF1Q9HCE7 757 aa12.1□□□□□ -0.47
CD4-208ENST00000538827 ANKHD1Q8IWZ3 2542 aaKnown RBP12.1□□□□□ -0.47
CD4-208ENST00000538827 NIPBLQ6KC79 2804 aaeCLIP12.1□□□□□ -0.47
CD4-208ENST00000538827 DNHD1Q96M86 4753 aa12.09□□□□□ -0.47
CD4-208ENST00000538827 IGKV1-9A0A0C4DH69 117 aa12.09□□□□□ -0.47
CD4-208ENST00000538827 MEGF11A6BM72 1044 aa12.09□□□□□ -0.47
CD4-208ENST00000538827 KITLGP21583 273 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms